chr01	irgsp1_rep	mRNA	2983	10815	.	+	.	ID=Os01t0100100-01;Name=Os01t0100100-01;GO=Molecular Function: Rab GTPase activator activity (GO:0005097),Cellular Component: intracellular (GO:0005622),Biological Process: regulation of Rab GTPase activity (GO:0032313);InterPro=RabGAP/TBC (IPR000195);KEGG=Os01t0100100-01;Locus_id=Os01g0100100;Note=RabGAP/TBC domain containing protein.;Transcript_evidence=AK242339 (DDBJ, antisense transcript);ORF_evidence=Q655M0 (UniProt);NIAS_FLcDNA=J075199P03;PGFD=Os01t0100100-01
chr01	irgsp1_rep	five_prime_UTR	2983	3268	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	five_prime_UTR	3354	3448	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	3449	3616	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	4357	4455	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	5457	5560	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	7136	7944	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	8028	8150	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	8232	8320	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	8408	8608	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	9210	9615	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	10102	10187	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	CDS	10274	10297	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	three_prime_UTR	10298	10430	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	three_prime_UTR	10504	10815	.	+	.	Parent=Os01t0100100-01
chr01	irgsp1_rep	mRNA	11218	12435	.	+	.	ID=Os01t0100200-01;Name=Os01t0100200-01;Locus_id=Os01g0100200;Note=Conserved hypothetical protein.;Transcript_evidence=AK059894 (DDBJ, Best hit);ORF_evidence=B8ACR2 (UniProt);KEGG=Os01t0100200-01;NIAS_FLcDNA=006-208-E01
chr01	irgsp1_rep	five_prime_UTR	11218	11797	.	+	.	Parent=Os01t0100200-01
chr01	irgsp1_rep	CDS	11798	12060	.	+	.	Parent=Os01t0100200-01
chr01	irgsp1_rep	CDS	12152	12317	.	+	.	Parent=Os01t0100200-01
chr01	irgsp1_rep	three_prime_UTR	12318	12435	.	+	.	Parent=Os01t0100200-01
chr01	irgsp1_rep	mRNA	11372	12284	.	-	.	ID=Os01t0100300-00;Name=Os01t0100300-00;Locus_id=Os01g0100300;Note=Cytochrome P450 domain containing protein.;Transcript_evidence=AK365211 (DDBJ);ORF_evidence=B9EYQ3 (UniProt);InterPro=Cytochrome P450 (IPR001128);GO=Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: iron ion binding (GO:0005506),Molecular Function: electron carrier activity (GO:0009055),Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705),Molecular Function: heme binding (GO:0020037)
chr01	irgsp1_rep	CDS	12146	12284	.	-	.	Parent=Os01t0100300-00
chr01	irgsp1_rep	CDS	11372	12042	.	-	.	Parent=Os01t0100300-00
chr01	irgsp1_rep	mRNA	12721	15685	.	+	.	ID=Os01t0100400-01;Name=Os01t0100400-01;Locus_id=Os01g0100400;Note=Similar to Pectinesterase-like protein.;Transcript_evidence=AK101455 (DDBJ, Best hit);ORF_evidence=Q1EPX7 (UniProt);InterPro=Multicopper oxidase, type 1 (IPR001117),Cupredoxin (IPR008972),Multicopper oxidase, type 2 (IPR011706),Multicopper oxidase, type 3 (IPR011707);GO=Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: copper ion binding (GO:0005507),Molecular Function: oxidoreductase activity (GO:0016491);KEGG=Os01t0100400-01;NIAS_FLcDNA=J033040A20;PGFD=Os01t0100400-01
chr01	irgsp1_rep	five_prime_UTR	12721	12773	.	+	.	Parent=Os01t0100400-01
chr01	irgsp1_rep	CDS	12774	13813	.	+	.	Parent=Os01t0100400-01
chr01	irgsp1_rep	CDS	13906	14271	.	+	.	Parent=Os01t0100400-01
chr01	irgsp1_rep	CDS	14359	14437	.	+	.	Parent=Os01t0100400-01
chr01	irgsp1_rep	CDS	14969	15171	.	+	.	Parent=Os01t0100400-01
chr01	irgsp1_rep	CDS	15266	15359	.	+	.	Parent=Os01t0100400-01
chr01	irgsp1_rep	three_prime_UTR	15360	15685	.	+	.	Parent=Os01t0100400-01
chr01	irgsp1_rep	mRNA	12808	13978	.	-	.	ID=Os01t0100466-00;Name=Os01t0100466-00;Locus_id=Os01g0100466;Note=Hypothetical protein.;Transcript_evidence=tplb0021n10 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	13880	13978	.	-	.	Parent=Os01t0100466-00
chr01	irgsp1_rep	five_prime_UTR	13103	13782	.	-	.	Parent=Os01t0100466-00
chr01	irgsp1_rep	CDS	12869	13102	.	-	.	Parent=Os01t0100466-00
chr01	irgsp1_rep	three_prime_UTR	12808	12868	.	-	.	Parent=Os01t0100466-00
chr01	irgsp1_rep	mRNA	16399	20144	.	+	.	ID=Os01t0100500-01;Name=Os01t0100500-01;Locus_id=Os01g0100500;Note=Immunoglobulin-like domain containing protein.;Transcript_evidence=AK067316 (DDBJ, Best hit);ORF_evidence=A2WJL2 (UniProt);KEGG=Os01t0100500-01;NIAS_FLcDNA=J013104J17;PGFD=Os01t0100500-01;IDCGP=Os01t0100500-01
chr01	irgsp1_rep	five_prime_UTR	16399	16598	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	CDS	16599	16976	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	CDS	17383	17474	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	CDS	17558	18258	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	CDS	18501	18571	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	CDS	18968	19057	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	CDS	19142	19321	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	CDS	19531	19593	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	three_prime_UTR	19594	19629	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	three_prime_UTR	19734	20144	.	+	.	Parent=Os01t0100500-01
chr01	irgsp1_rep	mRNA	22841	26892	.	+	.	ID=Os01t0100600-01;Name=Os01t0100600-01;Locus_id=Os01g0100600;Note=Single-stranded nucleic acid binding R3H domain containing protein.;Transcript_evidence=AK121362 (DDBJ, Best hit);ORF_evidence=B9EYQ6 (UniProt);InterPro=Single-stranded nucleic acid binding R3H (IPR001374),SUZ domain (IPR024771);GO=Molecular Function: nucleic acid binding (GO:0003676);KEGG=Os01t0100600-01;NIAS_FLcDNA=J023124E16;PGFD=Os01t0100600-01;IDCGP=Os01t0100600-01
chr01	irgsp1_rep	five_prime_UTR	22841	23231	.	+	.	Parent=Os01t0100600-01
chr01	irgsp1_rep	CDS	23232	23281	.	+	.	Parent=Os01t0100600-01
chr01	irgsp1_rep	CDS	23572	23847	.	+	.	Parent=Os01t0100600-01
chr01	irgsp1_rep	CDS	23962	24033	.	+	.	Parent=Os01t0100600-01
chr01	irgsp1_rep	CDS	24492	24577	.	+	.	Parent=Os01t0100600-01
chr01	irgsp1_rep	CDS	25445	25519	.	+	.	Parent=Os01t0100600-01
chr01	irgsp1_rep	CDS	25883	26391	.	+	.	Parent=Os01t0100600-01
chr01	irgsp1_rep	three_prime_UTR	26392	26892	.	+	.	Parent=Os01t0100600-01
chr01	irgsp1_rep	mRNA	25861	26424	.	-	.	ID=Os01t0100650-00;Name=Os01t0100650-00;Locus_id=Os01g0100650;Note=Hypothetical gene.;Transcript_evidence=EU948781 (DDBJ);ORF_evidence=longestORF;KEGG=Os01t0100650-00
chr01	irgsp1_rep	five_prime_UTR	26424	26424	.	-	.	Parent=Os01t0100650-00
chr01	irgsp1_rep	CDS	26040	26423	.	-	.	Parent=Os01t0100650-00
chr01	irgsp1_rep	three_prime_UTR	25861	26039	.	-	.	Parent=Os01t0100650-00
chr01	irgsp1_rep	mRNA	27143	28644	.	+	.	ID=Os01t0100700-01;Name=Os01t0100700-01;Locus_id=Os01g0100700;Note=Similar to 40S ribosomal protein S5-1.;Transcript_evidence=AK121523 (DDBJ, Best hit),AK059844 (DDBJ, Best hit);ORF_evidence=B3TLN7 (UniProt);InterPro=Ribosomal protein S7 (IPR000235),Ribosomal protein S7, eukaryotic/archaeal (IPR005716),Ribosomal protein S7, conserved site (IPR020606),Ribosomal protein S7 domain (IPR023798);GO=Biological Process: translation (GO:0006412),Cellular Component: intracellular (GO:0005622),Cellular Component: ribosome (GO:0005840),Cellular Component: small ribosomal subunit (GO:0015935),Molecular Function: RNA binding (GO:0003723),Molecular Function: structural constituent of ribosome (GO:0003735);NIAS_FLcDNA=J033028P14,006-206-E02;PGFD=Os01t0100700-01;IDCGP=Os01t0100700-01
chr01	irgsp1_rep	five_prime_UTR	27143	27220	.	+	.	Parent=Os01t0100700-01
chr01	irgsp1_rep	CDS	27221	27292	.	+	.	Parent=Os01t0100700-01
chr01	irgsp1_rep	CDS	27370	27641	.	+	.	Parent=Os01t0100700-01
chr01	irgsp1_rep	CDS	28090	28293	.	+	.	Parent=Os01t0100700-01
chr01	irgsp1_rep	CDS	28365	28419	.	+	.	Parent=Os01t0100700-01
chr01	irgsp1_rep	three_prime_UTR	28420	28644	.	+	.	Parent=Os01t0100700-01
chr01	irgsp1_rep	mRNA	29818	34453	.	+	.	ID=Os01t0100800-01;Name=Os01t0100800-01;Locus_id=Os01g0100800;Note=Protein of unknown function DUF1664 family protein.;Transcript_evidence=AK122012 (DDBJ, Best hit);ORF_evidence=B8ACR5 (UniProt);InterPro=Protein of unknown function DUF1664 (IPR012458);KEGG=Os01t0100800-01;NIAS_FLcDNA=J033111I18;PGFD=Os01t0100800-01;IDCGP=Os01t0100800-01
chr01	irgsp1_rep	five_prime_UTR	29818	29939	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	29940	29976	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	30146	30228	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	30735	30806	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	30885	30963	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	31258	31325	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	31505	31606	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	32377	32466	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	32542	32616	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	32712	32744	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	32828	32905	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	33274	33330	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	33400	33471	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	33543	33617	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	CDS	33975	34124	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	three_prime_UTR	34125	34453	.	+	.	Parent=Os01t0100800-01
chr01	irgsp1_rep	mRNA	35623	41136	.	+	.	ID=Os01t0100900-01;Name=Os01t0100900-01;Locus_id=Os01g0100900;Note=Pyridoxal phosphate-dependent decarboxylase domain containing protein.;Transcript_evidence=AK243573 (DDBJ, Best hit);ORF_evidence=B1NY92 (UniProt);InterPro=Pyridoxal phosphate-dependent decarboxylase (IPR002129),Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (IPR015421),Pyridoxal phosphate-dependent transferase, major domain (IPR015424);GO=Biological Process: carboxylic acid metabolic process (GO:0019752),Molecular Function: catalytic activity (GO:0003824),Molecular Function: carboxy-lyase activity (GO:0016831),Molecular Function: pyridoxal phosphate binding (GO:0030170);KEGG=Os01t0100900-01 (EC:4.1.2.27);NIAS_FLcDNA=J100082C01;PGFD=Os01t0100900-01;IDCGP=Os01t0100900-01
chr01	irgsp1_rep	five_prime_UTR	35623	35742	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	35743	35939	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	36027	36072	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	36517	36668	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	36818	36877	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	37594	37818	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	37892	38033	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	38276	38326	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	38434	38525	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	39319	39445	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	39553	39568	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	39939	40046	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	40135	40189	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	40456	40602	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	40703	40781	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	CDS	40885	41007	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	three_prime_UTR	41008	41136	.	+	.	Parent=Os01t0100900-01
chr01	irgsp1_rep	mRNA	58658	61090	-1.12199	+	.	ID=Os01t0101150-00;Name=Os01t0101150-00;Locus_id=Os01g0101150;Note=Hypothetical conserved gene.;Transcript_evidence=ab initio prediction;ORF_evidence=Q7F2F8 (UniProt);InterPro=Pentatricopeptide repeat (IPR002885),Tetratricopeptide-like helical (IPR011990);GO=Molecular Function: binding (GO:0005488);KEGG=Os01t0101150-00;PGFD=Os01t0101150-00
chr01	irgsp1_rep	CDS	58658	61090	-1.12199	+	0	Parent=Os01t0101150-00
chr01	irgsp1_rep	mRNA	60091	61086	.	-	.	ID=Os01t0101175-00;Name=Os01t0101175-00;Locus_id=Os01g0101175;Note=Non-protein coding transcript.;Transcript_evidence=BT084741 (DDBJ);ORF_evidence=NONE
chr01	irgsp1_rep	exon	60091	61086	.	-	.	Parent=Os01t0101175-00
chr01	irgsp1_rep	mRNA	62060	63576	.	+	.	ID=Os01t0101200-01;Name=Os01t0101200-01;Locus_id=Os01g0101200;Note=2,3-diketo-5-methylthio-1-phosphopentane phosphatase domain containing protein.;Transcript_evidence=AK067866 (DDBJ, Best hit),AK104517 (DDBJ, Best hit),AK104625 (DDBJ, Best hit),AK104752 (DDBJ, Best hit);ORF_evidence=NP_974931.1 (RefSeq);InterPro=2,3-diketo-5-methylthio-1-phosphopentane phosphatase (IPR010041),HAD-like domain (IPR023214);GO=Biological Process: L-methionine salvage from methylthioadenosine (GO:0019509),Molecular Function: acireductone synthase activity (GO:0043874),Molecular Function: metal ion binding (GO:0046872);NIAS_FLcDNA=J013127C12,006-303-C10,006-310-A09,001-038-F07;PGFD=Os01t0101200-01;IDCGP=Os01t0101200-01
chr01	irgsp1_rep	five_prime_UTR	62060	62103	.	+	.	Parent=Os01t0101200-01
chr01	irgsp1_rep	CDS	62104	62295	.	+	.	Parent=Os01t0101200-01
chr01	irgsp1_rep	CDS	62385	62905	.	+	.	Parent=Os01t0101200-01
chr01	irgsp1_rep	CDS	62996	63114	.	+	.	Parent=Os01t0101200-01
chr01	irgsp1_rep	CDS	63248	63345	.	+	.	Parent=Os01t0101200-01
chr01	irgsp1_rep	three_prime_UTR	63346	63576	.	+	.	Parent=Os01t0101200-01
chr01	irgsp1_rep	mRNA	62112	65537	.	+	.	ID=Os01t0101200-02;Name=Os01t0101200-02;Locus_id=Os01g0101200;Note=2,3-diketo-5-methylthio-1-phosphopentane phosphatase domain containing protein.;Transcript_evidence=AK119457 (DDBJ, Best hit);ORF_evidence=Q7F2F8 (UniProt);InterPro=2,3-diketo-5-methylthio-1-phosphopentane phosphatase (IPR010041),HAD-like domain (IPR023214);GO=Biological Process: L-methionine salvage from methylthioadenosine (GO:0019509),Molecular Function: acireductone synthase activity (GO:0043874),Molecular Function: metal ion binding (GO:0046872);KEGG=Os01t0101200-02 (EC:3.1.3.77);NIAS_FLcDNA=001-133-E05;PGFD=Os01t0101200-02
chr01	irgsp1_rep	five_prime_UTR	62112	62112	.	+	.	Parent=Os01t0101200-02
chr01	irgsp1_rep	CDS	62113	62295	.	+	.	Parent=Os01t0101200-02
chr01	irgsp1_rep	CDS	62385	62905	.	+	.	Parent=Os01t0101200-02
chr01	irgsp1_rep	CDS	62996	63114	.	+	.	Parent=Os01t0101200-02
chr01	irgsp1_rep	CDS	63248	63345	.	+	.	Parent=Os01t0101200-02
chr01	irgsp1_rep	three_prime_UTR	63346	65537	.	+	.	Parent=Os01t0101200-02
chr01	irgsp1_rep	mRNA	63350	66302	.	-	.	ID=Os01t0101300-01;Name=Os01t0101300-01;Locus_id=Os01g0101300;Note=Similar to MRNA, partial cds, clone: RAFL22-26-L17. (Fragment).;Transcript_evidence=AK287446 (DDBJ, Best hit);ORF_evidence=Q680Z5 (UniProt);KEGG=Os01t0101300-01;NIAS_FLcDNA=J043016L21;PGFD=Os01t0101300-01
chr01	irgsp1_rep	five_prime_UTR	65951	66302	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	CDS	65628	65950	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	CDS	65248	65431	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	CDS	64902	65152	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	CDS	64665	64779	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	CDS	64339	64431	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	CDS	63877	64020	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	CDS	63670	63783	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	three_prime_UTR	63350	63669	.	-	.	Parent=Os01t0101300-01
chr01	irgsp1_rep	mRNA	72816	78349	.	+	.	ID=Os01t0101600-01;Name=Os01t0101600-01;Locus_id=Os01g0101600;Note=Immunoglobulin-like fold domain containing protein.;Transcript_evidence=AK099952 (DDBJ, Best hit);ORF_evidence=Q7F2F5 (UniProt);InterPro=RNA recognition motif domain (IPR000504),Zinc finger, CCCH-type (IPR000571),Filamin/ABP280 repeat (IPR001298),Nucleotide-binding, alpha-beta plait (IPR012677),Immunoglobulin-like fold (IPR013783),Immunoglobulin E-set (IPR014756),Filamin/ABP280 repeat-like (IPR017868);GO=Molecular Function: nucleotide binding (GO:0000166),Molecular Function: nucleic acid binding (GO:0003676),Molecular Function: protein binding (GO:0005515),Molecular Function: zinc ion binding (GO:0008270);KEGG=Os01t0101600-01;NIAS_FLcDNA=J013123J12;PGFD=Os01t0101600-01;IDCGP=Os01t0101600-01
chr01	irgsp1_rep	five_prime_UTR	72816	72902	.	+	.	Parent=Os01t0101600-01
chr01	irgsp1_rep	CDS	72903	73935	.	+	.	Parent=Os01t0101600-01
chr01	irgsp1_rep	CDS	74468	74981	.	+	.	Parent=Os01t0101600-01
chr01	irgsp1_rep	CDS	75619	77008	.	+	.	Parent=Os01t0101600-01
chr01	irgsp1_rep	three_prime_UTR	77009	77205	.	+	.	Parent=Os01t0101600-01
chr01	irgsp1_rep	three_prime_UTR	77333	78349	.	+	.	Parent=Os01t0101600-01
chr01	irgsp1_rep	mRNA	72823	77699	.	+	.	ID=Os01t0101600-02;Name=Os01t0101600-02;Locus_id=Os01g0101600;Note=Immunoglobulin-like fold domain containing protein.;Transcript_evidence=AK122118 (DDBJ, Best hit);ORF_evidence=Q7F2F5 (UniProt);InterPro=RNA recognition motif domain (IPR000504),Zinc finger, CCCH-type (IPR000571),Filamin/ABP280 repeat (IPR001298),Nucleotide-binding, alpha-beta plait (IPR012677),Immunoglobulin-like fold (IPR013783),Immunoglobulin E-set (IPR014756),Filamin/ABP280 repeat-like (IPR017868);GO=Molecular Function: nucleotide binding (GO:0000166),Molecular Function: nucleic acid binding (GO:0003676),Molecular Function: protein binding (GO:0005515),Molecular Function: zinc ion binding (GO:0008270);KEGG=Os01t0101600-02;NIAS_FLcDNA=J033128C08;PGFD=Os01t0101600-02
chr01	irgsp1_rep	five_prime_UTR	72823	72902	.	+	.	Parent=Os01t0101600-02
chr01	irgsp1_rep	CDS	72903	73935	.	+	.	Parent=Os01t0101600-02
chr01	irgsp1_rep	CDS	74468	74981	.	+	.	Parent=Os01t0101600-02
chr01	irgsp1_rep	CDS	75619	77008	.	+	.	Parent=Os01t0101600-02
chr01	irgsp1_rep	three_prime_UTR	77009	77699	.	+	.	Parent=Os01t0101600-02
chr01	irgsp1_rep	mRNA	75942	77699	.	+	.	ID=Os01t0101600-03;Name=Os01t0101600-03;Locus_id=Os01g0101600;Note=Hypothetical conserved gene.;Transcript_evidence=AK103820 (DDBJ, Best hit);ORF_evidence=Q7F2F5 (UniProt);KEGG=Os01t0101600-03;NIAS_FLcDNA=J033147H07
chr01	irgsp1_rep	five_prime_UTR	75942	75943	.	+	.	Parent=Os01t0101600-03
chr01	irgsp1_rep	CDS	75944	77008	.	+	.	Parent=Os01t0101600-03
chr01	irgsp1_rep	three_prime_UTR	77009	77699	.	+	.	Parent=Os01t0101600-03
chr01	irgsp1_rep	mRNA	82426	84095	.	+	.	ID=Os01t0101700-00;Name=Os01t0101700-00;Locus_id=Os01g0101700;Note=Similar to chaperone protein dnaJ 20.;Transcript_evidence=FP098445 (DDBJ);ORF_evidence=NP_001151671.1 (RefSeq);InterPro=Heat shock protein DnaJ, N-terminal (IPR001623),Heat shock protein DnaJ (IPR003095),Heat shock protein DnaJ, conserved site (IPR018253);GO=Biological Process: protein folding (GO:0006457),Molecular Function: heat shock protein binding (GO:0031072),Molecular Function: unfolded protein binding (GO:0051082)
chr01	irgsp1_rep	five_prime_UTR	82426	82506	.	+	.	Parent=Os01t0101700-00
chr01	irgsp1_rep	CDS	82507	82932	.	+	.	Parent=Os01t0101700-00
chr01	irgsp1_rep	CDS	83724	83864	.	+	.	Parent=Os01t0101700-00
chr01	irgsp1_rep	three_prime_UTR	83865	84095	.	+	.	Parent=Os01t0101700-00
chr01	irgsp1_rep	mRNA	85337	88844	.	+	.	ID=Os01t0101800-01;Name=Os01t0101800-01;Locus_id=Os01g0101800;Note=Conserved hypothetical protein.;Transcript_evidence=AK103498 (DDBJ, Best hit);ORF_evidence=B8ACS0 (UniProt);KEGG=Os01t0101800-01;NIAS_FLcDNA=J033131A17;PGFD=Os01t0101800-01;IDCGP=Os01t0101800-01
chr01	irgsp1_rep	five_prime_UTR	85337	85378	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	CDS	85379	85600	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	CDS	85737	85830	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	CDS	85935	86086	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	CDS	86212	86299	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	CDS	86399	87681	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	CDS	88291	88398	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	CDS	88500	88583	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	three_prime_UTR	88584	88844	.	+	.	Parent=Os01t0101800-01
chr01	irgsp1_rep	mRNA	86211	88583	.	-	.	ID=Os01t0101850-00;Name=Os01t0101850-00;Locus_id=Os01g0101850;Note=Hypothetical protein.;Transcript_evidence=tplb0054b05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	88496	88583	.	-	.	Parent=Os01t0101850-00
chr01	irgsp1_rep	five_prime_UTR	88308	88396	.	-	.	Parent=Os01t0101850-00
chr01	irgsp1_rep	five_prime_UTR	87663	87694	.	-	.	Parent=Os01t0101850-00
chr01	irgsp1_rep	CDS	87327	87662	.	-	.	Parent=Os01t0101850-00
chr01	irgsp1_rep	three_prime_UTR	86384	87326	.	-	.	Parent=Os01t0101850-00
chr01	irgsp1_rep	three_prime_UTR	86211	86277	.	-	.	Parent=Os01t0101850-00
chr01	irgsp1_rep	mRNA	88883	89228	.	-	.	ID=Os01t0101900-00;Name=Os01t0101900-00;Locus_id=Os01g0101900;Note=Similar to OSIGBa0075F02.3 protein.;Transcript_evidence=AK333373 (DDBJ);ORF_evidence=Q01LF6 (UniProt);InterPro=Protein of unknown function DUF3339 (IPR021775);PGFD=Os01t0101900-00
chr01	irgsp1_rep	five_prime_UTR	89205	89228	.	-	.	Parent=Os01t0101900-00
chr01	irgsp1_rep	CDS	88986	89204	.	-	.	Parent=Os01t0101900-00
chr01	irgsp1_rep	three_prime_UTR	88883	88985	.	-	.	Parent=Os01t0101900-00
chr01	irgsp1_rep	mRNA	89763	91465	.	-	.	ID=Os01t0102000-01;Name=Os01t0102000-01;Locus_id=Os01g0102000;Note=Phosphoesterase family protein.;Transcript_evidence=AK101065 (DDBJ, Best hit);ORF_evidence=NP_190430.2 (RefSeq);InterPro=Phosphoesterase (IPR007312);GO=Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);KEGG=Os01t0102000-01;NIAS_FLcDNA=J033023E01;PGFD=Os01t0102000-01;IDCGP=Os01t0102000-01
chr01	irgsp1_rep	five_prime_UTR	91412	91465	.	-	.	Parent=Os01t0102000-01
chr01	irgsp1_rep	CDS	89825	91411	.	-	.	Parent=Os01t0102000-01
chr01	irgsp1_rep	three_prime_UTR	89763	89824	.	-	.	Parent=Os01t0102000-01
chr01	irgsp1_rep	mRNA	134300	135439	.	+	.	ID=Os01t0102300-01;Name=Os01t0102300-01;Locus_id=Os01g0102300;Note=Similar to thylakoid lumenal 17.9 kDa protein, chloroplast.;Transcript_evidence=AK067320 (DDBJ, Best hit);ORF_evidence=NP_194223.1 (RefSeq);KEGG=Os01t0102300-01;NIAS_FLcDNA=J013106P10;PGFD=Os01t0102300-01
chr01	irgsp1_rep	five_prime_UTR	134300	134310	.	+	.	Parent=Os01t0102300-01
chr01	irgsp1_rep	CDS	134311	134615	.	+	.	Parent=Os01t0102300-01
chr01	irgsp1_rep	CDS	134698	134824	.	+	.	Parent=Os01t0102300-01
chr01	irgsp1_rep	CDS	134912	135253	.	+	.	Parent=Os01t0102300-01
chr01	irgsp1_rep	three_prime_UTR	135254	135439	.	+	.	Parent=Os01t0102300-01
chr01	irgsp1_rep	mRNA	139826	141555	.	+	.	ID=Os01t0102400-01;Name=Os01t0102400-01;Locus_id=Os01g0102400;Note=Histone-fold domain containing protein.;Transcript_evidence=AK242226 (DDBJ, Best hit);ORF_evidence=NP_001041748.1 (RefSeq);InterPro=Transcription factor CBF/NF-Y/archaeal histone (IPR003958),Histone-fold (IPR009072);GO=Cellular Component: intracellular (GO:0005622),Molecular Function: DNA binding (GO:0003677),Molecular Function: sequence-specific DNA binding (GO:0043565);KEGG=Os01t0102400-01;NIAS_FLcDNA=J075175B02;PGFD=Os01t0102400-01;IDCGP=Os01t0102400-01
chr01	irgsp1_rep	five_prime_UTR	139826	139906	.	+	.	Parent=Os01t0102400-01
chr01	irgsp1_rep	five_prime_UTR	140120	140149	.	+	.	Parent=Os01t0102400-01
chr01	irgsp1_rep	CDS	140150	141415	.	+	.	Parent=Os01t0102400-01
chr01	irgsp1_rep	three_prime_UTR	141416	141555	.	+	.	Parent=Os01t0102400-01
chr01	irgsp1_rep	mRNA	141959	144554	.	+	.	ID=Os01t0102500-01;Name=Os01t0102500-01;Locus_id=Os01g0102500;Note=Conserved hypothetical protein.;Transcript_evidence=AK100002 (DDBJ, Best hit);ORF_evidence=B8ACS1 (UniProt);KEGG=Os01t0102500-01;NIAS_FLcDNA=J013135E13;PGFD=Os01t0102500-01
chr01	irgsp1_rep	five_prime_UTR	141959	142083	.	+	.	Parent=Os01t0102500-01
chr01	irgsp1_rep	CDS	142084	142631	.	+	.	Parent=Os01t0102500-01
chr01	irgsp1_rep	CDS	143191	143431	.	+	.	Parent=Os01t0102500-01
chr01	irgsp1_rep	CDS	143563	143680	.	+	.	Parent=Os01t0102500-01
chr01	irgsp1_rep	CDS	143817	143908	.	+	.	Parent=Os01t0102500-01
chr01	irgsp1_rep	three_prime_UTR	143909	144554	.	+	.	Parent=Os01t0102500-01
chr01	irgsp1_rep	mRNA	145603	147847	.	+	.	ID=Os01t0102600-01;Name=Os01t0102600-01;Locus_id=Os01g0102600;Note=Shikimate kinase domain containing protein.;Transcript_evidence=AK064812 (DDBJ, Best hit);ORF_evidence=NP_001150361.1 (RefSeq);InterPro=Shikimate kinase (IPR000623);GO=Molecular Function: shikimate kinase activity (GO:0004765),Molecular Function: ATP binding (GO:0005524);KEGG=Os01t0102600-01;NIAS_FLcDNA=J013000E05;PGFD=Os01t0102600-01;IDCGP=Os01t0102600-01
chr01	irgsp1_rep	five_prime_UTR	145603	145644	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	145645	145786	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	145905	145951	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	146028	146082	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	146179	146339	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	146450	146532	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	146611	146719	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	147106	147184	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	147311	147375	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	CDS	147507	147575	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	three_prime_UTR	147576	147847	.	+	.	Parent=Os01t0102600-01
chr01	irgsp1_rep	mRNA	147104	147805	.	+	.	ID=Os01t0102600-02;Name=Os01t0102600-02;Locus_id=Os01g0102600;Note=Similar to shikimate kinase family protein.;Transcript_evidence=AK062086 (DDBJ, Best hit);ORF_evidence=NP_001150361.1 (RefSeq);KEGG=Os01t0102600-02;NIAS_FLcDNA=001-044-G05
chr01	irgsp1_rep	five_prime_UTR	147104	147105	.	+	.	Parent=Os01t0102600-02
chr01	irgsp1_rep	CDS	147106	147184	.	+	.	Parent=Os01t0102600-02
chr01	irgsp1_rep	CDS	147311	147375	.	+	.	Parent=Os01t0102600-02
chr01	irgsp1_rep	CDS	147507	147575	.	+	.	Parent=Os01t0102600-02
chr01	irgsp1_rep	three_prime_UTR	147576	147805	.	+	.	Parent=Os01t0102600-02
chr01	irgsp1_rep	mRNA	148085	150568	.	+	.	ID=Os01t0102700-01;Name=Os01t0102700-01;Locus_id=Os01g0102700;Note=Translocon-associated beta family protein.;Transcript_evidence=AK063774 (DDBJ, Best hit),AK099081 (DDBJ, Best hit),AK099360 (DDBJ, Best hit);ORF_evidence=B7ENG6 (UniProt);InterPro=Translocon-associated beta (IPR008856);GO=Cellular Component: endoplasmic reticulum (GO:0005783),Cellular Component: integral to membrane (GO:0016021);NIAS_FLcDNA=001-121-C11,J023002L13,J033046F10;PGFD=Os01t0102700-01;IDCGP=Os01t0102700-01
chr01	irgsp1_rep	five_prime_UTR	148085	148146	.	+	.	Parent=Os01t0102700-01
chr01	irgsp1_rep	CDS	148147	148313	.	+	.	Parent=Os01t0102700-01
chr01	irgsp1_rep	CDS	149450	149548	.	+	.	Parent=Os01t0102700-01
chr01	irgsp1_rep	CDS	149634	149742	.	+	.	Parent=Os01t0102700-01
chr01	irgsp1_rep	CDS	149856	149931	.	+	.	Parent=Os01t0102700-01
chr01	irgsp1_rep	CDS	150152	150318	.	+	.	Parent=Os01t0102700-01
chr01	irgsp1_rep	three_prime_UTR	150319	150568	.	+	.	Parent=Os01t0102700-01
chr01	irgsp1_rep	mRNA	152853	156449	.	+	.	ID=Os01t0102800-01;Name=Os01t0102800-01;Locus_id=Os01g0102800;Note=Similar to chromatin remodeling complex subunit.;Transcript_evidence=AK064456 (DDBJ, Best hit);ORF_evidence=XP_002307656.1 (RefSeq);InterPro=SNF2-related (IPR000330),Helicase, C-terminal (IPR001650),DEAD-like helicase (IPR014001);GO=Molecular Function: nucleic acid binding (GO:0003676),Molecular Function: DNA binding (GO:0003677),Molecular Function: helicase activity (GO:0004386),Molecular Function: ATP binding (GO:0005524);KEGG=Os01t0102800-01;NIAS_FLcDNA=002-110-F11;PGFD=Os01t0102800-01
chr01	irgsp1_rep	five_prime_UTR	152853	152853	.	+	.	Parent=Os01t0102800-01
chr01	irgsp1_rep	CDS	152854	153025	.	+	.	Parent=Os01t0102800-01
chr01	irgsp1_rep	CDS	153178	154646	.	+	.	Parent=Os01t0102800-01
chr01	irgsp1_rep	CDS	155010	155450	.	+	.	Parent=Os01t0102800-01
chr01	irgsp1_rep	CDS	155543	156214	.	+	.	Parent=Os01t0102800-01
chr01	irgsp1_rep	three_prime_UTR	156215	156449	.	+	.	Parent=Os01t0102800-01
chr01	irgsp1_rep	mRNA	164577	168921	.	+	.	ID=Os01t0102850-00;Name=Os01t0102850-00;Locus_id=Os01g0102850;Note=Similar to nitrilase 2.;Transcript_evidence=FP097470 (DDBJ);ORF_evidence=NP_001105196.1 (RefSeq)
chr01	irgsp1_rep	five_prime_UTR	164577	164905	.	+	.	Parent=Os01t0102850-00
chr01	irgsp1_rep	five_prime_UTR	168499	168804	.	+	.	Parent=Os01t0102850-00
chr01	irgsp1_rep	CDS	168805	168921	.	+	.	Parent=Os01t0102850-00
chr01	irgsp1_rep	mRNA	169390	170316	.	-	.	ID=Os01t0102900-01;Name=Os01t0102900-01;Locus_id=Os01g0102900;Note=Light regulated Lir1 family protein.;Transcript_evidence=AK120535 (DDBJ, Best hit),AK067670 (DDBJ, Best hit);ORF_evidence=Q03200 (UniProt);InterPro=Light regulated Lir1 (IPR009856);KEGG=Os01t0102900-01;NIAS_FLcDNA=J013128K04,J013120E23;PGFD=Os01t0102900-01;IDCGP=Os01t0102900-01
chr01	irgsp1_rep	five_prime_UTR	170261	170316	.	-	.	Parent=Os01t0102900-01
chr01	irgsp1_rep	CDS	170091	170260	.	-	.	Parent=Os01t0102900-01
chr01	irgsp1_rep	CDS	169751	169909	.	-	.	Parent=Os01t0102900-01
chr01	irgsp1_rep	CDS	169599	169656	.	-	.	Parent=Os01t0102900-01
chr01	irgsp1_rep	three_prime_UTR	169390	169598	.	-	.	Parent=Os01t0102900-01
chr01	irgsp1_rep	mRNA	170798	173144	.	-	.	ID=Os01t0103000-01;Name=Os01t0103000-01;Locus_id=Os01g0103000;Note=Snf7 family protein.;Transcript_evidence=AK108287 (DDBJ, Best hit);ORF_evidence=B6TYU1 (UniProt);InterPro=Snf7 (IPR005024);GO=Biological Process: protein transport (GO:0015031);KEGG=Os01t0103000-01;NIAS_FLcDNA=002-141-D09;PGFD=Os01t0103000-01;IDCGP=Os01t0103000-01
chr01	irgsp1_rep	five_prime_UTR	173073	173144	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	CDS	173004	173072	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	CDS	172770	172921	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	CDS	172578	172671	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	CDS	172398	172469	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	CDS	171764	171875	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	CDS	171406	171554	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	CDS	171045	171095	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	three_prime_UTR	170798	171044	.	-	.	Parent=Os01t0103000-01
chr01	irgsp1_rep	mRNA	172587	175073	.	+	.	ID=Os01t0103050-01;Name=Os01t0103050-01;Locus_id=Os01g0103050;Note=Non-protein coding transcript.;Transcript_evidence=AK066123 (DDBJ, Best hit),AK068676 (DDBJ, Best hit);ORF_evidence=NONE;NIAS_FLcDNA=J013055A22,J013158I15
chr01	irgsp1_rep	exon	172587	175073	.	+	.	Parent=Os01t0103050-01
chr01	irgsp1_rep	mRNA	178815	180433	.	-	.	ID=Os01t0103075-00;Name=Os01t0103075-00;Locus_id=Os01g0103075;Note=Hypothetical protein.;Transcript_evidence=tplb0038k08 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	180055	180433	.	-	.	Parent=Os01t0103075-00
chr01	irgsp1_rep	CDS	179512	180054	.	-	.	Parent=Os01t0103075-00
chr01	irgsp1_rep	three_prime_UTR	178815	179511	.	-	.	Parent=Os01t0103075-00
chr01	irgsp1_rep	mRNA	178607	180548	.	+	.	ID=Os01t0103100-01;Name=Os01t0103100-01;Locus_id=Os01g0103100;Note=TGF-beta receptor, type I/II extracellular region family protein.;Transcript_evidence=AK070557 (DDBJ, Best hit);ORF_evidence=XP_002873609.1 (RefSeq);InterPro=Oligopeptide transporter (IPR000109),Major facilitator superfamily domain, general substrate transporter (IPR016196),PTR2 family proton/oligopeptide symporter, conserved site (IPR018456);GO=Biological Process: oligopeptide transport (GO:0006857),Cellular Component: membrane (GO:0016020),Molecular Function: transporter activity (GO:0005215);KEGG=Os01t0103100-01;NIAS_FLcDNA=J023061L16;PGFD=Os01t0103100-01
chr01	irgsp1_rep	five_prime_UTR	178607	178641	.	+	.	Parent=Os01t0103100-01
chr01	irgsp1_rep	CDS	178642	180462	.	+	.	Parent=Os01t0103100-01
chr01	irgsp1_rep	three_prime_UTR	180463	180548	.	+	.	Parent=Os01t0103100-01
chr01	irgsp1_rep	mRNA	178652	180575	.	+	.	ID=Os01t0103100-02;Name=Os01t0103100-02;Locus_id=Os01g0103100;Note=Similar to predicted protein.;Transcript_evidence=AK058723 (DDBJ, Best hit);ORF_evidence=XP_002873609.1 (RefSeq);InterPro=Oligopeptide transporter (IPR000109),Major facilitator superfamily domain, general substrate transporter (IPR016196),PTR2 family proton/oligopeptide symporter, conserved site (IPR018456);GO=Biological Process: oligopeptide transport (GO:0006857),Cellular Component: membrane (GO:0016020),Molecular Function: transporter activity (GO:0005215);KEGG=Os01t0103100-02;NIAS_FLcDNA=001-019-E11;PGFD=Os01t0103100-02
chr01	irgsp1_rep	five_prime_UTR	178652	178677	.	+	.	Parent=Os01t0103100-02
chr01	irgsp1_rep	CDS	178678	180462	.	+	.	Parent=Os01t0103100-02
chr01	irgsp1_rep	three_prime_UTR	180463	180575	.	+	.	Parent=Os01t0103100-02
chr01	irgsp1_rep	mRNA	185189	185828	.	-	.	ID=Os01t0103400-01;Name=Os01t0103400-01;Locus_id=Os01g0103400;Note=Hypothetical gene.;Transcript_evidence=AK109199 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os01t0103400-01;NIAS_FLcDNA=002-156-B12
chr01	irgsp1_rep	five_prime_UTR	185828	185828	.	-	.	Parent=Os01t0103400-01
chr01	irgsp1_rep	CDS	185435	185827	.	-	.	Parent=Os01t0103400-01
chr01	irgsp1_rep	three_prime_UTR	185189	185434	.	-	.	Parent=Os01t0103400-01
chr01	irgsp1_rep	mRNA	187345	190904	.	-	.	ID=Os01t0103600-01;Name=Os01t0103600-01;Locus_id=Os01g0103600;Note=Similar to sterol-8,7-isomerase.;Transcript_evidence=AK102848 (DDBJ, Best hit);ORF_evidence=NP_001105846.1 (RefSeq);InterPro=Emopamil-binding (IPR007905);GO=Biological Process: sterol metabolic process (GO:0016125),Cellular Component: endoplasmic reticulum (GO:0005783),Cellular Component: integral to membrane (GO:0016021),Molecular Function: cholestenol delta-isomerase activity (GO:0047750);KEGG=Os01t0103600-01 (EC:5.3.3.5);NIAS_FLcDNA=J033110C04;PGFD=Os01t0103600-01;IDCGP=Os01t0103600-01
chr01	irgsp1_rep	five_prime_UTR	190232	190904	.	-	.	Parent=Os01t0103600-01
chr01	irgsp1_rep	CDS	190087	190231	.	-	.	Parent=Os01t0103600-01
chr01	irgsp1_rep	CDS	189841	189990	.	-	.	Parent=Os01t0103600-01
chr01	irgsp1_rep	CDS	189396	189715	.	-	.	Parent=Os01t0103600-01
chr01	irgsp1_rep	three_prime_UTR	187345	189395	.	-	.	Parent=Os01t0103600-01
chr01	irgsp1_rep	mRNA	186250	190262	.	-	.	ID=Os01t0103600-02;Name=Os01t0103600-02;Locus_id=Os01g0103600;Note=Emopamil-binding family protein.;Transcript_evidence=AK059848 (DDBJ, Best hit);ORF_evidence=B6TIR9 (UniProt);InterPro=Emopamil-binding (IPR007905);GO=Biological Process: sterol metabolic process (GO:0016125),Cellular Component: endoplasmic reticulum (GO:0005783),Cellular Component: integral to membrane (GO:0016021),Molecular Function: cholestenol delta-isomerase activity (GO:0047750);KEGG=Os01t0103600-02 (EC:5.3.3.5);NIAS_FLcDNA=006-206-F06;PGFD=Os01t0103600-02
chr01	irgsp1_rep	five_prime_UTR	190232	190262	.	-	.	Parent=Os01t0103600-02
chr01	irgsp1_rep	CDS	190087	190231	.	-	.	Parent=Os01t0103600-02
chr01	irgsp1_rep	CDS	189841	189990	.	-	.	Parent=Os01t0103600-02
chr01	irgsp1_rep	CDS	189607	189715	.	-	.	Parent=Os01t0103600-02
chr01	irgsp1_rep	CDS	186516	186771	.	-	.	Parent=Os01t0103600-02
chr01	irgsp1_rep	three_prime_UTR	186250	186515	.	-	.	Parent=Os01t0103600-02
chr01	irgsp1_rep	mRNA	187545	188586	.	+	.	ID=Os01t0103650-00;Name=Os01t0103650-00;Locus_id=Os01g0103650;Note=Hypothetical gene.;Transcript_evidence=AK242117 (DDBJ, Secondary hit);ORF_evidence=longestORF;KEGG=Os01t0103650-00
chr01	irgsp1_rep	five_prime_UTR	187545	187546	.	+	.	Parent=Os01t0103650-00
chr01	irgsp1_rep	CDS	187547	187768	.	+	.	Parent=Os01t0103650-00
chr01	irgsp1_rep	three_prime_UTR	187769	188020	.	+	.	Parent=Os01t0103650-00
chr01	irgsp1_rep	three_prime_UTR	188060	188385	.	+	.	Parent=Os01t0103650-00
chr01	irgsp1_rep	three_prime_UTR	188455	188586	.	+	.	Parent=Os01t0103650-00
chr01	irgsp1_rep	mRNA	191037	196287	.	+	.	ID=Os01t0103700-01;Name=Os01t0103700-01;Locus_id=Os01g0103700;Note=Conserved hypothetical protein.;Transcript_evidence=AK070525 (DDBJ, Best hit);ORF_evidence=B9ETK1 (UniProt);NIAS_FLcDNA=J023061E16
chr01	irgsp1_rep	five_prime_UTR	191037	191161	.	+	.	Parent=Os01t0103700-01
chr01	irgsp1_rep	five_prime_UTR	191625	191693	.	+	.	Parent=Os01t0103700-01
chr01	irgsp1_rep	CDS	191694	191705	.	+	.	Parent=Os01t0103700-01
chr01	irgsp1_rep	CDS	192399	192506	.	+	.	Parent=Os01t0103700-01
chr01	irgsp1_rep	CDS	192958	193161	.	+	.	Parent=Os01t0103700-01
chr01	irgsp1_rep	CDS	193248	193356	.	+	.	Parent=Os01t0103700-01
chr01	irgsp1_rep	CDS	193434	193507	.	+	.	Parent=Os01t0103700-01
chr01	irgsp1_rep	three_prime_UTR	193508	196287	.	+	.	Parent=Os01t0103700-01
chr01	irgsp1_rep	mRNA	197647	200803	.	+	.	ID=Os01t0103800-01;Name=Os01t0103800-01;Locus_id=Os01g0103800;Note=Conserved hypothetical protein.;Transcript_evidence=AK102782 (DDBJ, Best hit);ORF_evidence=A2WJN5 (UniProt);KEGG=Os01t0103800-01;NIAS_FLcDNA=J033107K12;PGFD=Os01t0103800-01
chr01	irgsp1_rep	five_prime_UTR	197647	197838	.	+	.	Parent=Os01t0103800-01
chr01	irgsp1_rep	five_prime_UTR	198034	198129	.	+	.	Parent=Os01t0103800-01
chr01	irgsp1_rep	CDS	198130	198225	.	+	.	Parent=Os01t0103800-01
chr01	irgsp1_rep	CDS	198830	200036	.	+	.	Parent=Os01t0103800-01
chr01	irgsp1_rep	CDS	200253	200479	.	+	.	Parent=Os01t0103800-01
chr01	irgsp1_rep	three_prime_UTR	200480	200803	.	+	.	Parent=Os01t0103800-01
chr01	irgsp1_rep	mRNA	201944	206202	.	+	.	ID=Os01t0103900-01;Name=Os01t0103900-01;Locus_id=Os01g0103900;Note=Polynucleotidyl transferase, Ribonuclease H fold domain containing protein.;Transcript_evidence=AK069975 (DDBJ, Best hit);ORF_evidence=B9EYR9 (UniProt);KEGG=Os01t0103900-01;NIAS_FLcDNA=J023037J01;PGFD=Os01t0103900-01
chr01	irgsp1_rep	five_prime_UTR	201944	202041	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	202042	202110	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	202252	202359	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	203007	203127	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	203302	203429	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	203511	203658	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	203760	203938	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	204203	204440	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	204543	204635	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	204730	204875	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	205042	205149	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	205290	205378	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	CDS	205534	205543	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	three_prime_UTR	205544	206202	.	+	.	Parent=Os01t0103900-01
chr01	irgsp1_rep	mRNA	206134	209606	.	-	.	ID=Os01t0104000-01;Name=Os01t0104000-01;Locus_id=Os01g0104000;Note=C-type lectin domain containing protein.;Transcript_evidence=AK103808 (DDBJ, Best hit);ORF_evidence=NP_175641.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),C-type lectin (IPR001304),Tyrosine-protein kinase, active site (IPR008266),Protein kinase-like domain (IPR011009),C-type lectin-like (IPR016186),C-type lectin fold (IPR016187);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: binding (GO:0005488),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0104000-01;NIAS_FLcDNA=J033147A10;PGFD=Os01t0104000-01
chr01	irgsp1_rep	five_prime_UTR	209526	209606	.	-	.	Parent=Os01t0104000-01
chr01	irgsp1_rep	CDS	209438	209525	.	-	.	Parent=Os01t0104000-01
chr01	irgsp1_rep	CDS	208408	208836	.	-	.	Parent=Os01t0104000-01
chr01	irgsp1_rep	CDS	207706	208276	.	-	.	Parent=Os01t0104000-01
chr01	irgsp1_rep	CDS	206450	207029	.	-	.	Parent=Os01t0104000-01
chr01	irgsp1_rep	three_prime_UTR	206134	206449	.	-	.	Parent=Os01t0104000-01
chr01	irgsp1_rep	mRNA	206131	209581	.	-	.	ID=Os01t0104000-02;Name=Os01t0104000-02;Locus_id=Os01g0104000;Note=Similar to predicted protein.;Transcript_evidence=AK072087 (DDBJ, Best hit);ORF_evidence=NP_175641.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),C-type lectin (IPR001304),Tyrosine-protein kinase, active site (IPR008266),Protein kinase-like domain (IPR011009),C-type lectin-like (IPR016186),C-type lectin fold (IPR016187);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: binding (GO:0005488),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0104000-02;NIAS_FLcDNA=J013116I09;PGFD=Os01t0104000-02
chr01	irgsp1_rep	five_prime_UTR	209526	209581	.	-	.	Parent=Os01t0104000-02
chr01	irgsp1_rep	CDS	209438	209525	.	-	.	Parent=Os01t0104000-02
chr01	irgsp1_rep	CDS	208408	208836	.	-	.	Parent=Os01t0104000-02
chr01	irgsp1_rep	CDS	207706	208273	.	-	.	Parent=Os01t0104000-02
chr01	irgsp1_rep	CDS	206450	207029	.	-	.	Parent=Os01t0104000-02
chr01	irgsp1_rep	three_prime_UTR	206131	206449	.	-	.	Parent=Os01t0104000-02
chr01	irgsp1_rep	mRNA	209771	214173	.	+	.	ID=Os01t0104100-01;Name=Os01t0104100-01;Locus_id=Os01g0104100;Note=Similar to protein binding / zinc ion binding.;Transcript_evidence=AK072797 (DDBJ, Best hit);ORF_evidence=NP_191004.1 (RefSeq);InterPro=Zinc finger, RING-type (IPR001841),Tetratricopeptide-like helical (IPR011990),Zinc finger, RING/FYVE/PHD-type (IPR013083),Zinc finger, RING-type, conserved site (IPR017907);GO=Molecular Function: binding (GO:0005488),Molecular Function: protein binding (GO:0005515),Molecular Function: zinc ion binding (GO:0008270);NIAS_FLcDNA=J023139M11
chr01	irgsp1_rep	CDS	209771	209896	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	CDS	210244	210563	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	CDS	210659	210890	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	CDS	211015	211160	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	CDS	212265	212352	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	CDS	212433	212579	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	CDS	213490	213639	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	CDS	213741	213788	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	three_prime_UTR	213789	214173	.	+	.	Parent=Os01t0104100-01
chr01	irgsp1_rep	mRNA	209794	214147	.	+	.	ID=Os01t0104100-02;Name=Os01t0104100-02;Locus_id=Os01g0104100;Note=Similar to protein binding / zinc ion binding.;Transcript_evidence=AK104280 (DDBJ, Best hit);ORF_evidence=NP_191004.1 (RefSeq);InterPro=Zinc finger, RING-type (IPR001841),Tetratricopeptide-like helical (IPR011990),Zinc finger, RING/FYVE/PHD-type (IPR013083),Zinc finger, RING-type, conserved site (IPR017907);GO=Molecular Function: binding (GO:0005488),Molecular Function: protein binding (GO:0005515),Molecular Function: zinc ion binding (GO:0008270);NIAS_FLcDNA=001-006-B04
chr01	irgsp1_rep	five_prime_UTR	209794	209794	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	CDS	209795	209896	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	CDS	210244	210563	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	CDS	210659	210890	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	CDS	211015	211160	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	CDS	212265	212352	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	CDS	212433	212579	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	CDS	213490	213639	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	CDS	213741	213788	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	three_prime_UTR	213789	214147	.	+	.	Parent=Os01t0104100-02
chr01	irgsp1_rep	mRNA	216212	217345	-0.812134	+	.	ID=Os01t0104200-00;Name=Os01t0104200-00;Locus_id=Os01g0104200;Note=No apical meristem (NAM) protein domain containing protein.;Transcript_evidence=ab initio prediction;ORF_evidence=A2ZNA6 (UniProt);InterPro=No apical meristem (NAM) protein (IPR003441);GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355),Molecular Function: DNA binding (GO:0003677)
chr01	irgsp1_rep	CDS	216212	216769	-1.19003	+	0	Parent=Os01t0104200-00
chr01	irgsp1_rep	CDS	216884	217345	-2.04628	+	0	Parent=Os01t0104200-00
chr01	irgsp1_rep	mRNA	224916	225543	.	+	.	ID=Os01t0104350-00;Name=Os01t0104350-00;Locus_id=Os01g0104350;Note=Non-protein coding transcript.;Transcript_evidence=CT834982 (DDBJ, Best hit);ORF_evidence=NONE
chr01	irgsp1_rep	exon	224916	225543	.	+	.	Parent=Os01t0104350-00
chr01	irgsp1_rep	mRNA	226897	229229	.	+	.	ID=Os01t0104400-01;Name=Os01t0104400-01;Locus_id=Os01g0104400;Note=Ricin B-related lectin domain containing protein.;Transcript_evidence=AK071375 (DDBJ, Best hit);ORF_evidence=NP_001149550.1 (RefSeq);InterPro=Ricin B-related lectin (IPR008997);KEGG=Os01t0104400-01;NIAS_FLcDNA=J023095C18;PGFD=Os01t0104400-01
chr01	irgsp1_rep	five_prime_UTR	226897	227181	.	+	.	Parent=Os01t0104400-01
chr01	irgsp1_rep	CDS	227182	227634	.	+	.	Parent=Os01t0104400-01
chr01	irgsp1_rep	CDS	227742	227864	.	+	.	Parent=Os01t0104400-01
chr01	irgsp1_rep	CDS	228557	228785	.	+	.	Parent=Os01t0104400-01
chr01	irgsp1_rep	CDS	228930	228931	.	+	.	Parent=Os01t0104400-01
chr01	irgsp1_rep	three_prime_UTR	228932	229229	.	+	.	Parent=Os01t0104400-01
chr01	irgsp1_rep	mRNA	227139	229301	.	+	.	ID=Os01t0104400-02;Name=Os01t0104400-02;Locus_id=Os01g0104400;Note=Ricin B-related lectin domain containing protein.;Transcript_evidence=AK060132 (DDBJ, Best hit);ORF_evidence=NP_001149550.1 (RefSeq);InterPro=Ricin B-related lectin (IPR008997);KEGG=Os01t0104400-02;NIAS_FLcDNA=006-309-C04;PGFD=Os01t0104400-02
chr01	irgsp1_rep	five_prime_UTR	227139	227181	.	+	.	Parent=Os01t0104400-02
chr01	irgsp1_rep	CDS	227182	227634	.	+	.	Parent=Os01t0104400-02
chr01	irgsp1_rep	CDS	227742	227864	.	+	.	Parent=Os01t0104400-02
chr01	irgsp1_rep	CDS	228557	228785	.	+	.	Parent=Os01t0104400-02
chr01	irgsp1_rep	CDS	228930	228931	.	+	.	Parent=Os01t0104400-02
chr01	irgsp1_rep	three_prime_UTR	228932	229301	.	+	.	Parent=Os01t0104400-02
chr01	irgsp1_rep	mRNA	227179	229214	.	+	.	ID=Os01t0104400-03;Name=Os01t0104400-03;Locus_id=Os01g0104400;Note=Ricin B-related lectin domain containing protein.;Transcript_evidence=AK104820 (DDBJ, Best hit),AK104555 (DDBJ, Best hit);ORF_evidence=NP_001149550.1 (RefSeq);InterPro=Ricin B-related lectin (IPR008997);NIAS_FLcDNA=001-041-A11,006-305-F10;PGFD=Os01t0104400-03
chr01	irgsp1_rep	five_prime_UTR	227179	227181	.	+	.	Parent=Os01t0104400-03
chr01	irgsp1_rep	CDS	227182	227634	.	+	.	Parent=Os01t0104400-03
chr01	irgsp1_rep	CDS	227742	227864	.	+	.	Parent=Os01t0104400-03
chr01	irgsp1_rep	CDS	228557	228785	.	+	.	Parent=Os01t0104400-03
chr01	irgsp1_rep	CDS	228930	228931	.	+	.	Parent=Os01t0104400-03
chr01	irgsp1_rep	three_prime_UTR	228932	229214	.	+	.	Parent=Os01t0104400-03
chr01	irgsp1_rep	mRNA	241680	243440	.	+	.	ID=Os01t0104500-01;Name=Os01t0104500-01;Locus_id=Os01g0104500;Note=No apical meristem (NAM) protein domain containing protein.;Transcript_evidence=AK242268 (DDBJ, Best hit);ORF_evidence=C3PU42 (UniProt);InterPro=No apical meristem (NAM) protein (IPR003441);GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355),Molecular Function: DNA binding (GO:0003677);KEGG=Os01t0104500-01;NIAS_FLcDNA=J075186C19;PGFD=Os01t0104500-01
chr01	irgsp1_rep	five_prime_UTR	241680	241702	.	+	.	Parent=Os01t0104500-01
chr01	irgsp1_rep	five_prime_UTR	241866	241907	.	+	.	Parent=Os01t0104500-01
chr01	irgsp1_rep	CDS	241908	242091	.	+	.	Parent=Os01t0104500-01
chr01	irgsp1_rep	CDS	242199	242977	.	+	.	Parent=Os01t0104500-01
chr01	irgsp1_rep	three_prime_UTR	242978	243440	.	+	.	Parent=Os01t0104500-01
chr01	irgsp1_rep	mRNA	248828	256872	.	-	.	ID=Os01t0104600-01;Name=Os01t0104600-01;Locus_id=Os01g0104600;Note=Similar to Light-mediated development protein DET1 (Deetiolated1 homolog) (tDET1) (High pigmentation protein 2) (Protein dark green).;Transcript_evidence=AK100613 (DDBJ, Best hit);ORF_evidence=D0EW63 (UniProt);InterPro=De-etiolated protein 1, Det1 (IPR019138);NIAS_FLcDNA=J023107M18;PGFD=Os01t0104600-01
chr01	irgsp1_rep	five_prime_UTR	256442	256872	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	256361	256441	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	255674	256098	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	255325	255553	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	251695	251790	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	251316	251384	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	251026	251082	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	250860	250940	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	250617	250781	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	249861	249956	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	249369	249468	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	CDS	248971	249107	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	three_prime_UTR	248828	248970	.	-	.	Parent=Os01t0104600-01
chr01	irgsp1_rep	mRNA	248828	256571	.	-	.	ID=Os01t0104600-02;Name=Os01t0104600-02;Locus_id=Os01g0104600;Note=Similar to Light-mediated development protein DET1 (Deetiolated1 homolog) (tDET1) (High pigmentation protein 2) (Protein dark green).;Transcript_evidence=AK058683 (DDBJ, Best hit);ORF_evidence=D0EW63 (UniProt);InterPro=De-etiolated protein 1, Det1 (IPR019138);NIAS_FLcDNA=001-019-A06
chr01	irgsp1_rep	five_prime_UTR	256442	256571	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	256361	256441	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	255674	256098	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	255325	255553	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	251695	251790	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	251316	251384	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	251026	251082	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	250860	250940	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	250617	250781	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	249861	249956	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	249369	249468	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	CDS	248971	249107	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	three_prime_UTR	248828	248970	.	-	.	Parent=Os01t0104600-02
chr01	irgsp1_rep	mRNA	261530	268145	.	+	.	ID=Os01t0104800-01;Name=Os01t0104800-01;Locus_id=Os01g0104800;Note=Sas10/Utp3 family protein.;Transcript_evidence=AK067602 (DDBJ, Best hit);ORF_evidence=B9EYS2 (UniProt);InterPro=Sas10/Utp3/C1D (IPR007146),Something about silencing protein 10 (Sas10), C-terminal (IPR018972);GO=Biological Process: gene silencing (GO:0016458),Cellular Component: nucleus (GO:0005634);KEGG=Os01t0104800-01;NIAS_FLcDNA=J013109E04;PGFD=Os01t0104800-01;IDCGP=Os01t0104800-01
chr01	irgsp1_rep	five_prime_UTR	261530	261561	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	261562	261661	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	261767	261805	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	261895	261941	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	262582	262681	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	262925	263181	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	263525	263640	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	264014	264098	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	265236	265415	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	265506	265649	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	265740	265817	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	265909	266045	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	266138	266246	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	267237	267514	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	267591	267657	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	267734	267802	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	CDS	267880	268011	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	three_prime_UTR	268012	268145	.	+	.	Parent=Os01t0104800-01
chr01	irgsp1_rep	mRNA	263523	268120	.	+	.	ID=Os01t0104800-02;Name=Os01t0104800-02;Locus_id=Os01g0104800;Note=Hypothetical conserved gene.;Transcript_evidence=AK103287 (DDBJ, Best hit);ORF_evidence=B9EYS2 (UniProt);InterPro=Sas10/Utp3/C1D (IPR007146),Something about silencing protein 10 (Sas10), C-terminal (IPR018972);GO=Biological Process: gene silencing (GO:0016458),Cellular Component: nucleus (GO:0005634);KEGG=Os01t0104800-02;NIAS_FLcDNA=J033124N04;PGFD=Os01t0104800-02
chr01	irgsp1_rep	five_prime_UTR	263523	263524	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	263525	263640	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	264014	264098	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	265236	265415	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	265506	265649	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	265740	265817	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	265909	266045	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	266138	266246	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	267237	267514	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	267591	267657	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	267734	267802	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	CDS	267880	268011	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	three_prime_UTR	268012	268120	.	+	.	Parent=Os01t0104800-02
chr01	irgsp1_rep	mRNA	270179	275084	.	-	.	ID=Os01t0104900-01;Name=Os01t0104900-01;Locus_id=Os01g0104900;Note=Transferase family protein.;Transcript_evidence=AK121535 (DDBJ, Best hit);ORF_evidence=A2WJP7 (UniProt);InterPro=Transferase (IPR003480),Chloramphenicol acetyltransferase-like domain (IPR023213);GO=Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);KEGG=Os01t0104900-01;NIAS_FLcDNA=J033031D14;PGFD=Os01t0104900-01;IDCGP=Os01t0104900-01
chr01	irgsp1_rep	five_prime_UTR	274958	275084	.	-	.	Parent=Os01t0104900-01
chr01	irgsp1_rep	CDS	274529	274957	.	-	.	Parent=Os01t0104900-01
chr01	irgsp1_rep	CDS	270356	271333	.	-	.	Parent=Os01t0104900-01
chr01	irgsp1_rep	three_prime_UTR	270179	270355	.	-	.	Parent=Os01t0104900-01
chr01	irgsp1_rep	mRNA	270250	271518	.	-	.	ID=Os01t0104900-02;Name=Os01t0104900-02;Locus_id=Os01g0104900;Note=Hypothetical conserved gene.;Transcript_evidence=AK071797 (DDBJ, Best hit);ORF_evidence=Q657X9 (UniProt);InterPro=Transferase (IPR003480),Chloramphenicol acetyltransferase-like domain (IPR023213);GO=Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);KEGG=Os01t0104900-02;NIAS_FLcDNA=J023113I10;PGFD=Os01t0104900-02
chr01	irgsp1_rep	five_prime_UTR	271457	271518	.	-	.	Parent=Os01t0104900-02
chr01	irgsp1_rep	five_prime_UTR	271310	271333	.	-	.	Parent=Os01t0104900-02
chr01	irgsp1_rep	CDS	270356	271309	.	-	.	Parent=Os01t0104900-02
chr01	irgsp1_rep	three_prime_UTR	270250	270355	.	-	.	Parent=Os01t0104900-02
chr01	irgsp1_rep	mRNA	284762	291892	.	-	.	ID=Os01t0105300-01;Name=Os01t0105300-01;Locus_id=Os01g0105300;Note=Similar to HAT family dimerisation domain containing protein, expressed.;Transcript_evidence=AK072732 (DDBJ, Best hit);ORF_evidence=Q2R271 (UniProt);NIAS_FLcDNA=J023138L22
chr01	irgsp1_rep	five_prime_UTR	291838	291892	.	-	.	Parent=Os01t0105300-01
chr01	irgsp1_rep	five_prime_UTR	291678	291738	.	-	.	Parent=Os01t0105300-01
chr01	irgsp1_rep	five_prime_UTR	291520	291534	.	-	.	Parent=Os01t0105300-01
chr01	irgsp1_rep	five_prime_UTR	291398	291436	.	-	.	Parent=Os01t0105300-01
chr01	irgsp1_rep	five_prime_UTR	285021	287047	.	-	.	Parent=Os01t0105300-01
chr01	irgsp1_rep	CDS	284931	285020	.	-	.	Parent=Os01t0105300-01
chr01	irgsp1_rep	three_prime_UTR	284762	284930	.	-	.	Parent=Os01t0105300-01
chr01	irgsp1_rep	mRNA	288372	292296	.	+	.	ID=Os01t0105400-01;Name=Os01t0105400-01;Locus_id=Os01g0105400;Note=Similar to Kinesin heavy chain.;Transcript_evidence=AK106913 (DDBJ, Best hit);ORF_evidence=Q93XG2 (UniProt);InterPro=Kinesin, motor domain (IPR001752);GO=Biological Process: microtubule-based movement (GO:0007018),Molecular Function: microtubule motor activity (GO:0003777),Molecular Function: ATP binding (GO:0005524);KEGG=Os01t0105400-01;NIAS_FLcDNA=002-119-A09;PGFD=Os01t0105400-01
chr01	irgsp1_rep	five_prime_UTR	288372	288846	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	five_prime_UTR	288950	289116	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	five_prime_UTR	289202	289572	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	five_prime_UTR	289661	289830	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	five_prime_UTR	290395	290432	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	CDS	290433	290512	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	CDS	291372	291558	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	three_prime_UTR	291559	291574	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	three_prime_UTR	291648	291779	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	three_prime_UTR	291859	291948	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	three_prime_UTR	292073	292296	.	+	.	Parent=Os01t0105400-01
chr01	irgsp1_rep	mRNA	303233	306736	.	+	.	ID=Os01t0105700-01;Name=Os01t0105700-01;Locus_id=Os01g0105700;Note=Basic helix-loop-helix dimerisation region bHLH domain containing protein.;Transcript_evidence=AK119493 (DDBJ, Best hit);ORF_evidence=Q657Z3 (UniProt);InterPro=Helix-loop-helix DNA-binding (IPR011598);KEGG=Os01t0105700-01;NIAS_FLcDNA=001-134-D09;PGFD=Os01t0105700-01;IDCGP=Os01t0105700-01
chr01	irgsp1_rep	five_prime_UTR	303233	303328	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	CDS	303329	303471	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	CDS	303981	304509	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	CDS	305572	305718	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	CDS	305834	305899	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	CDS	305993	306058	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	CDS	306171	306245	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	CDS	306353	306493	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	three_prime_UTR	306494	306736	.	+	.	Parent=Os01t0105700-01
chr01	irgsp1_rep	mRNA	306871	308842	.	-	.	ID=Os01t0105800-01;Name=Os01t0105800-01;Locus_id=Os01g0105800;Note=Similar to Iron sulfur assembly protein 1.;Transcript_evidence=AK066672 (DDBJ, Best hit);ORF_evidence=NP_001147131.1 (RefSeq);InterPro=FeS cluster biogenesis (IPR000361),FeS cluster insertion (IPR016092),FeS cluster insertion, C-terminal, conserved site (IPR017870);GO=Biological Process: iron-sulfur cluster assembly (GO:0016226),Molecular Function: structural molecule activity (GO:0005198),Molecular Function: iron-sulfur cluster binding (GO:0051536);KEGG=Os01t0105800-01;NIAS_FLcDNA=J013071F21;PGFD=Os01t0105800-01;IDCGP=Os01t0105800-01
chr01	irgsp1_rep	five_prime_UTR	308703	308842	.	-	.	Parent=Os01t0105800-01
chr01	irgsp1_rep	five_prime_UTR	308602	308626	.	-	.	Parent=Os01t0105800-01
chr01	irgsp1_rep	CDS	308397	308601	.	-	.	Parent=Os01t0105800-01
chr01	irgsp1_rep	CDS	307296	307413	.	-	.	Parent=Os01t0105800-01
chr01	irgsp1_rep	CDS	307124	307217	.	-	.	Parent=Os01t0105800-01
chr01	irgsp1_rep	three_prime_UTR	306871	307123	.	-	.	Parent=Os01t0105800-01
chr01	irgsp1_rep	mRNA	309520	313170	.	-	.	ID=Os01t0105900-01;Name=Os01t0105900-01;Locus_id=Os01g0105900;Note=Carbohydrate/purine kinase domain containing protein.;Transcript_evidence=AK066907 (DDBJ, Best hit);ORF_evidence=NP_001148411.1 (RefSeq);InterPro=Carbohydrate/purine kinase (IPR011611);KEGG=Os01t0105900-01;NIAS_FLcDNA=J013092I02;PGFD=Os01t0105900-01;IDCGP=Os01t0105900-01
chr01	irgsp1_rep	five_prime_UTR	313065	313170	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	CDS	312867	313064	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	CDS	311163	311426	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	CDS	311002	311073	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	CDS	310880	310918	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	CDS	310632	310739	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	CDS	310455	310552	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	CDS	310256	310367	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	CDS	309822	310070	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	three_prime_UTR	309520	309821	.	-	.	Parent=Os01t0105900-01
chr01	irgsp1_rep	mRNA	319754	322205	.	+	.	ID=Os01t0106200-01;Name=Os01t0106200-01;Locus_id=Os01g0106200;Note=Similar to RER1A protein (AtRER1A).;Transcript_evidence=AK060999 (DDBJ, Best hit);ORF_evidence=B6TRU3 (UniProt);InterPro=Retrieval of early ER protein Rer1 (IPR004932);GO=Cellular Component: integral to membrane (GO:0016021);KEGG=Os01t0106200-01;NIAS_FLcDNA=006-203-F05;PGFD=Os01t0106200-01;IDCGP=Os01t0106200-01
chr01	irgsp1_rep	five_prime_UTR	319754	319874	.	+	.	Parent=Os01t0106200-01
chr01	irgsp1_rep	CDS	319875	320236	.	+	.	Parent=Os01t0106200-01
chr01	irgsp1_rep	CDS	321468	321648	.	+	.	Parent=Os01t0106200-01
chr01	irgsp1_rep	CDS	321928	321975	.	+	.	Parent=Os01t0106200-01
chr01	irgsp1_rep	three_prime_UTR	321976	322205	.	+	.	Parent=Os01t0106200-01
chr01	irgsp1_rep	mRNA	322591	323923	.	-	.	ID=Os01t0106300-01;Name=Os01t0106300-01;Locus_id=Os01g0106300;Note=Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-).;Transcript_evidence=AK098946 (DDBJ, Best hit),AK061325 (DDBJ, Best hit),AK104189 (DDBJ, Best hit),AK104238 (DDBJ, Best hit),AK104669 (DDBJ, Best hit),AK104735 (DDBJ, Best hit),AK119550 (DDBJ, Best hit);ORF_evidence=Q8VYH7 (UniProt);InterPro=NmrA-like (IPR008030),NAD(P)-binding domain (IPR016040);GO=Molecular Function: nucleotide binding (GO:0000166);KEGG=Os01t0106300-01;NIAS_FLcDNA=J013045H04,006-302-G05,006-303-C06,006-307-H12,006-312-B02,001-038-D01,001-207-E04;PGFD=Os01t0106300-01
chr01	irgsp1_rep	five_prime_UTR	323847	323923	.	-	.	Parent=Os01t0106300-01
chr01	irgsp1_rep	CDS	323054	323846	.	-	.	Parent=Os01t0106300-01
chr01	irgsp1_rep	CDS	322810	322973	.	-	.	Parent=Os01t0106300-01
chr01	irgsp1_rep	three_prime_UTR	322591	322809	.	-	.	Parent=Os01t0106300-01
chr01	irgsp1_rep	mRNA	327128	328450	.	-	.	ID=Os01t0106400-01;Name=Os01t0106400-01;Locus_id=Os01g0106400;Note=Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-).;Transcript_evidence=AK102701 (DDBJ, Best hit),AK109339 (DDBJ, Best hit);ORF_evidence=Q8VYH7 (UniProt);InterPro=NmrA-like (IPR008030),NAD(P)-binding domain (IPR016040);GO=Molecular Function: nucleotide binding (GO:0000166);KEGG=Os01t0106400-01;NIAS_FLcDNA=J033103L17,006-202-E10;PGFD=Os01t0106400-01
chr01	irgsp1_rep	five_prime_UTR	328399	328450	.	-	.	Parent=Os01t0106400-01
chr01	irgsp1_rep	CDS	327618	328398	.	-	.	Parent=Os01t0106400-01
chr01	irgsp1_rep	CDS	327337	327500	.	-	.	Parent=Os01t0106400-01
chr01	irgsp1_rep	three_prime_UTR	327128	327336	.	-	.	Parent=Os01t0106400-01
chr01	irgsp1_rep	mRNA	331382	332345	.	-	.	ID=Os01t0106500-01;Name=Os01t0106500-01;Locus_id=Os01g0106500;Note=Conserved hypothetical protein.;Transcript_evidence=AK242772 (DDBJ, Best hit);ORF_evidence=NP_001172120.1 (RefSeq);KEGG=Os01t0106500-01;NIAS_FLcDNA=J090053L06;PGFD=Os01t0106500-01
chr01	irgsp1_rep	five_prime_UTR	332275	332345	.	-	.	Parent=Os01t0106500-01
chr01	irgsp1_rep	CDS	331630	332274	.	-	.	Parent=Os01t0106500-01
chr01	irgsp1_rep	three_prime_UTR	331382	331629	.	-	.	Parent=Os01t0106500-01
chr01	irgsp1_rep	mRNA	332667	333689	.	-	.	ID=Os01t0106600-01;Name=Os01t0106600-01;Locus_id=Os01g0106600;Note=Similar to Chitin-binding lectin 1 precursor (PL-I).;Transcript_evidence=AK061314 (DDBJ, Best hit);ORF_evidence=A2ZNC8 (UniProt);KEGG=Os01t0106600-01;NIAS_FLcDNA=006-302-C12
chr01	irgsp1_rep	five_prime_UTR	333637	333689	.	-	.	Parent=Os01t0106600-01
chr01	irgsp1_rep	CDS	332758	333636	.	-	.	Parent=Os01t0106600-01
chr01	irgsp1_rep	three_prime_UTR	332667	332757	.	-	.	Parent=Os01t0106600-01
chr01	irgsp1_rep	mRNA	335809	370652	-0.64157	+	.	ID=Os01t0106700-00;Name=Os01t0106700-00;Locus_id=Os01g0106700;Note=Hypothetical conserved gene.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001041778.1 (RefSeq);InterPro=Phosphatidylinositol 3-/4-kinase, catalytic (IPR000403),PIK-related kinase, FAT (IPR003151),PIK-related kinase, FATC (IPR003152),Protein kinase-like domain (IPR011009),PIK-related kinase (IPR014009),Ataxia-Telangiectasia Mutated (IPR015519),Phosphatidylinositol 3/4-kinase, conserved site (IPR018936);GO=Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein binding (GO:0005515),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772),Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773);KEGG=Os01t0106700-00 (EC:2.7.11.1);PGFD=Os01t0106700-00
chr01	irgsp1_rep	CDS	335809	335877	-1.99442	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	335966	336074	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	336159	336299	-2.03523	+	2	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	337337	337498	-2.78149	+	2	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	337577	337734	-2.03523	+	2	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	337972	338070	-2.78149	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	338180	338310	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	338385	338472	-2.78149	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	338587	338690	-2.78149	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	339346	339444	-2.34401	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	340262	340337	-2.03523	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	340969	341010	-2.34401	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	343370	343441	-2.34401	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	344393	344473	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	345166	345353	-2.78149	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	345591	346188	-2.36219	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	346274	346342	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	347729	347854	-2.78149	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	348048	348175	-2.12023	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	348986	349142	-2.03523	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	349342	349388	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	349472	349535	-2.03523	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	349691	349765	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	350292	350414	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	350797	350982	-2.19597	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	352179	352303	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	352390	352459	-2.03523	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	352974	353063	-2.56847	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	354065	354163	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	354758	354967	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	355686	355757	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	355836	355905	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	356829	356863	-3.974	+	2	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	357252	357317	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	357805	357852	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	358572	358676	-2.78149	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	358779	358865	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	359097	359399	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	359482	359594	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	360082	360148	-2.03523	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	360236	360310	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	360395	360517	-2.58852	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	361156	361320	-2.24132	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	361401	361502	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	362545	362696	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	362794	362995	-1.98204	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	363079	363126	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	363215	363298	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	364302	364385	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	364890	364970	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	365044	365133	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	365217	365279	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	366238	366378	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	366494	366550	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	366638	366697	-2.78149	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	367091	367185	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	367275	367383	-2.03523	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	368308	368387	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	368480	368558	-2.03523	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	368660	368706	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	368804	368903	-2.03523	+	1	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	369005	369136	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	369335	369469	-2.12023	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	369553	369618	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	370317	370457	-2.03523	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	CDS	370575	370652	-1.38475	+	0	Parent=Os01t0106700-00
chr01	irgsp1_rep	mRNA	370861	371198	.	+	.	ID=Os01t0106750-00;Name=Os01t0106750-00;Locus_id=Os01g0106750;Note=Non-protein coding transcript.;Transcript_evidence=CT834789 (DDBJ, Best hit);ORF_evidence=NONE
chr01	irgsp1_rep	exon	370861	371198	.	+	.	Parent=Os01t0106750-00
chr01	irgsp1_rep	mRNA	371831	374412	.	+	.	ID=Os01t0106800-01;Name=Os01t0106800-01;Locus_id=Os01g0106800;Note=Similar to RING-box protein 1A (Regulator of cullins 1a) (dRbx1).;Transcript_evidence=AK059300 (DDBJ, Best hit),AK073331 (DDBJ, Best hit),AK119792 (DDBJ, Best hit);ORF_evidence=B6T6J8 (UniProt);InterPro=Zinc finger, RING-type (IPR001841),Zinc finger, RING/FYVE/PHD-type (IPR013083),Zinc finger, RING-H2-type (IPR024766);GO=Molecular Function: protein binding (GO:0005515),Molecular Function: zinc ion binding (GO:0008270);NIAS_FLcDNA=001-025-F02,J033026G05,002-175-A04;PGFD=Os01t0106800-01;IDCGP=Os01t0106800-01
chr01	irgsp1_rep	five_prime_UTR	371831	371910	.	+	.	Parent=Os01t0106800-01
chr01	irgsp1_rep	CDS	371911	372070	.	+	.	Parent=Os01t0106800-01
chr01	irgsp1_rep	CDS	372168	372218	.	+	.	Parent=Os01t0106800-01
chr01	irgsp1_rep	CDS	372324	372383	.	+	.	Parent=Os01t0106800-01
chr01	irgsp1_rep	CDS	373958	374029	.	+	.	Parent=Os01t0106800-01
chr01	irgsp1_rep	CDS	374115	374152	.	+	.	Parent=Os01t0106800-01
chr01	irgsp1_rep	three_prime_UTR	374153	374412	.	+	.	Parent=Os01t0106800-01
chr01	irgsp1_rep	mRNA	374728	380713	.	-	.	ID=Os01t0106900-01;Name=Os01t0106900-01;Locus_id=Os01g0106900;Note=Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment).;Transcript_evidence=AK099702 (DDBJ, Best hit);ORF_evidence=Q8W250 (UniProt);InterPro=1-deoxy-D-xylulose 5-phosphate reductoisomerase (IPR003821),1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (IPR013512),1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (IPR013644),NAD(P)-binding domain (IPR016040);GO=Biological Process: isoprenoid biosynthetic process (GO:0008299),Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: nucleotide binding (GO:0000166),Molecular Function: protein binding (GO:0005515),Molecular Function: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity (GO:0030604),Molecular Function: metal ion binding (GO:0046872),Molecular Function: NADPH binding (GO:0070402);KEGG=Os01t0106900-01 (EC:1.1.1.267);NIAS_FLcDNA=J013075G02;PGFD=Os01t0106900-01;IDCGP=Os01t0106900-01
chr01	irgsp1_rep	five_prime_UTR	380489	380713	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	380398	380488	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	379206	379387	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	378841	378927	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	378616	378741	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	378471	378533	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	377617	377766	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	377314	377381	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	377123	377234	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	376938	377042	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	376647	376768	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	376003	376149	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	CDS	374980	375148	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	three_prime_UTR	374728	374979	.	-	.	Parent=Os01t0106900-01
chr01	irgsp1_rep	mRNA	374752	380534	.	-	.	ID=Os01t0106900-02;Name=Os01t0106900-02;Locus_id=Os01g0106900;Note=Similar to 1-deoxy-D-xylulose 5-phosphate reductoisomerase (Fragment).;Transcript_evidence=AK059692 (DDBJ, Best hit);ORF_evidence=Q8W250 (UniProt);InterPro=1-deoxy-D-xylulose 5-phosphate reductoisomerase (IPR003821),1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (IPR013512),1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (IPR013644),NAD(P)-binding domain (IPR016040);GO=Biological Process: isoprenoid biosynthetic process (GO:0008299),Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: nucleotide binding (GO:0000166),Molecular Function: protein binding (GO:0005515),Molecular Function: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity (GO:0030604),Molecular Function: metal ion binding (GO:0046872),Molecular Function: NADPH binding (GO:0070402);KEGG=Os01t0106900-02 (EC:1.1.1.267);NIAS_FLcDNA=001-032-B08;PGFD=Os01t0106900-02
chr01	irgsp1_rep	five_prime_UTR	380489	380534	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	380398	380488	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	379206	379387	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	378841	378927	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	378616	378741	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	378471	378533	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	377617	377766	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	377314	377381	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	377123	377234	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	376938	377042	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	376647	376768	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	376003	376149	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	CDS	374980	375148	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	three_prime_UTR	374752	374979	.	-	.	Parent=Os01t0106900-02
chr01	irgsp1_rep	mRNA	383250	386648	.	-	.	ID=Os01t0107000-01;Name=Os01t0107000-01;Locus_id=Os01g0107000;Note=Similar to peroxin Pex14.;Transcript_evidence=AK105067 (DDBJ, Best hit);ORF_evidence=NP_001150193.1 (RefSeq);InterPro=Peroxisome membrane anchor protein Pex14p, N-terminal (IPR006785);GO=Cellular Component: peroxisome (GO:0005777),Cellular Component: membrane (GO:0016020);NIAS_FLcDNA=001-044-H02
chr01	irgsp1_rep	five_prime_UTR	386549	386648	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	CDS	386515	386548	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	CDS	385724	385923	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	CDS	385580	385628	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	CDS	384934	385109	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	CDS	384646	384849	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	three_prime_UTR	384409	384645	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	three_prime_UTR	384302	384333	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	three_prime_UTR	384131	384176	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	three_prime_UTR	383950	384020	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	three_prime_UTR	383250	383864	.	-	.	Parent=Os01t0107000-01
chr01	irgsp1_rep	mRNA	383335	386621	.	-	.	ID=Os01t0107000-02;Name=Os01t0107000-02;Locus_id=Os01g0107000;Note=Peroxisome membrane anchor protein Pex14p, N-terminal domain containing protein.;Transcript_evidence=AK066969 (DDBJ, Best hit);ORF_evidence=NP_001150193.1 (RefSeq);InterPro=Peroxisome membrane anchor protein Pex14p, N-terminal (IPR006785);GO=Cellular Component: peroxisome (GO:0005777),Cellular Component: membrane (GO:0016020);KEGG=Os01t0107000-02;NIAS_FLcDNA=J013088I21;PGFD=Os01t0107000-02;IDCGP=Os01t0107000-02
chr01	irgsp1_rep	five_prime_UTR	386549	386621	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	386515	386548	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	385724	385923	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	385580	385628	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	384934	385109	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	384666	384849	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	384409	384558	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	384302	384333	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	384131	384176	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	383950	384020	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	CDS	383451	383864	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	three_prime_UTR	383335	383450	.	-	.	Parent=Os01t0107000-02
chr01	irgsp1_rep	mRNA	392083	392578	.	-	.	ID=Os01t0107400-01;Name=Os01t0107400-01;Locus_id=Os01g0107400;Note=Conserved hypothetical protein.;Transcript_evidence=AK059460 (DDBJ, Best hit);ORF_evidence=Q657Y4 (UniProt);KEGG=Os01t0107400-01;NIAS_FLcDNA=001-028-C09
chr01	irgsp1_rep	five_prime_UTR	392578	392578	.	-	.	Parent=Os01t0107400-01
chr01	irgsp1_rep	CDS	392398	392577	.	-	.	Parent=Os01t0107400-01
chr01	irgsp1_rep	three_prime_UTR	392083	392397	.	-	.	Parent=Os01t0107400-01
chr01	irgsp1_rep	mRNA	412625	415823	.	+	.	ID=Os01t0107700-01;Name=Os01t0107700-01;Locus_id=Os01g0107700;Note=Similar to LIMONENE cyclase like protein.;Transcript_evidence=AK070027 (DDBJ, Best hit);ORF_evidence=Q1EP17 (UniProt);InterPro=Exostosin-like (IPR004263),Twin-arginine translocation pathway, signal sequence (IPR006311);GO=Cellular Component: membrane (GO:0016020);KEGG=Os01t0107700-01;NIAS_FLcDNA=J023035K17;PGFD=Os01t0107700-01
chr01	irgsp1_rep	five_prime_UTR	412625	412674	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	CDS	412675	412911	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	CDS	413097	413213	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	CDS	413401	413439	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	CDS	413513	413605	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	CDS	413703	413839	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	CDS	414322	414670	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	CDS	414815	415495	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	three_prime_UTR	415496	415823	.	+	.	Parent=Os01t0107700-01
chr01	irgsp1_rep	mRNA	412636	415516	.	-	.	ID=Os01t0107750-00;Name=Os01t0107750-00;Locus_id=Os01g0107750;Note=Hypothetical protein.;Transcript_evidence=tplb0062k24 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	414824	415516	.	-	.	Parent=Os01t0107750-00
chr01	irgsp1_rep	five_prime_UTR	414333	414679	.	-	.	Parent=Os01t0107750-00
chr01	irgsp1_rep	five_prime_UTR	413696	413845	.	-	.	Parent=Os01t0107750-00
chr01	irgsp1_rep	five_prime_UTR	413518	413591	.	-	.	Parent=Os01t0107750-00
chr01	irgsp1_rep	CDS	413474	413517	.	-	.	Parent=Os01t0107750-00
chr01	irgsp1_rep	CDS	413120	413216	.	-	.	Parent=Os01t0107750-00
chr01	irgsp1_rep	CDS	412636	412941	.	-	.	Parent=Os01t0107750-00
chr01	irgsp1_rep	mRNA	416058	416130	.	+	.	ID=Os01t0107801-00;Name=Os01t0107801-00;Locus_id=Os01g0107801;Note=Non-protein coding transcript.;Transcript_evidence=X06283 (DDBJ);ORF_evidence=NONE
chr01	irgsp1_rep	exon	416058	416130	.	+	.	Parent=Os01t0107801-00
chr01	irgsp1_rep	mRNA	416264	420497	.	-	.	ID=Os01t0107900-01;Name=Os01t0107900-01;Locus_id=Os01g0107900;Note=Protein of unknown function DUF3506 domain containing protein.;Transcript_evidence=AK070363 (DDBJ, Best hit);ORF_evidence=A2WJS5 (UniProt);InterPro=Protein of unknown function DUF3506 (IPR021894);KEGG=Os01t0107900-01;NIAS_FLcDNA=J023047F20;PGFD=Os01t0107900-01;IDCGP=Os01t0107900-01
chr01	irgsp1_rep	five_prime_UTR	420403	420497	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	420157	420402	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	419941	420057	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	419757	419822	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	419575	419681	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	419408	419489	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	418567	419289	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	418147	418267	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	417920	418071	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	417776	417850	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	417510	417602	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	CDS	416666	416767	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	three_prime_UTR	416264	416665	.	-	.	Parent=Os01t0107900-01
chr01	irgsp1_rep	mRNA	416267	418797	.	-	.	ID=Os01t0107900-02;Name=Os01t0107900-02;Locus_id=Os01g0107900;Note=Protein of unknown function DUF3506 domain containing protein.;Transcript_evidence=AK058708 (DDBJ, Best hit);ORF_evidence=Q657X6 (UniProt);InterPro=Protein of unknown function DUF3506 (IPR021894);KEGG=Os01t0107900-02;NIAS_FLcDNA=001-019-D03;PGFD=Os01t0107900-02
chr01	irgsp1_rep	CDS	418567	418797	.	-	.	Parent=Os01t0107900-02
chr01	irgsp1_rep	CDS	418147	418267	.	-	.	Parent=Os01t0107900-02
chr01	irgsp1_rep	CDS	417920	418071	.	-	.	Parent=Os01t0107900-02
chr01	irgsp1_rep	CDS	417776	417850	.	-	.	Parent=Os01t0107900-02
chr01	irgsp1_rep	CDS	417510	417602	.	-	.	Parent=Os01t0107900-02
chr01	irgsp1_rep	CDS	416666	416767	.	-	.	Parent=Os01t0107900-02
chr01	irgsp1_rep	three_prime_UTR	416267	416665	.	-	.	Parent=Os01t0107900-02
chr01	irgsp1_rep	mRNA	422539	431217	.	+	.	ID=Os01t0108000-01;Name=Os01t0108000-01;Locus_id=Os01g0108000;Note=Conserved hypothetical protein.;Transcript_evidence=AK100813 (DDBJ, Best hit);ORF_evidence=A2WJS6 (UniProt);KEGG=Os01t0108000-01;NIAS_FLcDNA=J023121P16;PGFD=Os01t0108000-01
chr01	irgsp1_rep	five_prime_UTR	422539	422598	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	422599	422748	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	422910	422972	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	423069	423379	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	423524	423620	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	423697	423774	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	423871	423930	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	424019	424123	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	424743	424856	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	425145	425186	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	425380	425496	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	425568	425755	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	426514	426785	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	426869	426990	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	427118	427160	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	427265	427356	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	428331	428379	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	428623	428693	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	428793	428912	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	429586	429674	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	430266	430311	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	CDS	430926	430973	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	three_prime_UTR	430974	431217	.	+	.	Parent=Os01t0108000-01
chr01	irgsp1_rep	mRNA	441203	448951	.	+	.	ID=Os01t0108200-01;Name=Os01t0108200-01;Locus_id=Os01g0108200;Note=Similar to Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE).;Transcript_evidence=BT065395 (DDBJ);ORF_evidence=B6U134 (UniProt);InterPro=Peptidase S9, prolyl oligopeptidase, catalytic domain (IPR001375),Peptidase S9A, prolyl oligopeptidase (IPR002470),Peptidase S9A/B/C, oligopeptidase, N-terminal beta-propeller (IPR004106),Peptidase S9A, oligopeptidase, N-terminal (IPR023302);GO=Biological Process: proteolysis (GO:0006508),Molecular Function: serine-type endopeptidase activity (GO:0004252),Molecular Function: serine-type peptidase activity (GO:0008236),Molecular Function: serine-type exopeptidase activity (GO:0070008);PGFD=Os01t0108200-01
chr01	irgsp1_rep	five_prime_UTR	441203	441327	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	441328	441437	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	441514	441733	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	442605	442805	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	442915	442985	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	443058	443217	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	445166	445759	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	445869	446249	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	446573	446648	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	446736	446799	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	447334	447469	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	448666	448779	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	CDS	448851	448916	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	three_prime_UTR	448917	448951	.	+	.	Parent=Os01t0108200-01
chr01	irgsp1_rep	mRNA	455707	457425	.	+	.	ID=Os01t0108400-00;Name=Os01t0108400-00;Locus_id=Os01g0108400;Note=Helix-loop-helix DNA-binding domain containing protein.;Transcript_evidence=AK353822 (DDBJ);ORF_evidence=NP_001041788.2 (RefSeq);InterPro=Helix-loop-helix DNA-binding (IPR011598)
chr01	irgsp1_rep	CDS	455707	455907	.	+	.	Parent=Os01t0108400-00
chr01	irgsp1_rep	CDS	456682	457104	.	+	.	Parent=Os01t0108400-00
chr01	irgsp1_rep	CDS	457278	457343	.	+	.	Parent=Os01t0108400-00
chr01	irgsp1_rep	three_prime_UTR	457344	457425	.	+	.	Parent=Os01t0108400-00
chr01	irgsp1_rep	mRNA	460177	461371	.	+	.	ID=Os01t0108500-00;Name=Os01t0108500-00;Locus_id=Os01g0108500;Note=Protein of unknown function DUF3778 domain containing protein.;Transcript_evidence=AK071488 (DDBJ, Secondary hit);ORF_evidence=NP_001172123.1 (RefSeq);InterPro=Protein of unknown function DUF3778 (IPR022256);KEGG=Os01t0108500-00;PGFD=Os01t0108500-00;IDCGP=Os01t0108500-00
chr01	irgsp1_rep	five_prime_UTR	460177	460406	.	+	.	Parent=Os01t0108500-00
chr01	irgsp1_rep	CDS	460407	461327	.	+	.	Parent=Os01t0108500-00
chr01	irgsp1_rep	three_prime_UTR	461328	461371	.	+	.	Parent=Os01t0108500-00
chr01	irgsp1_rep	mRNA	478384	481099	.	+	.	ID=Os01t0108600-01;Name=Os01t0108600-01;Locus_id=Os01g0108600;Note=Basic helix-loop-helix dimerisation region bHLH domain containing protein.;Transcript_evidence=AK070332 (DDBJ, Best hit);ORF_evidence=Q8W0N9 (UniProt);InterPro=Helix-loop-helix DNA-binding (IPR011598);KEGG=Os01t0108600-01;NIAS_FLcDNA=J023050C11
chr01	irgsp1_rep	five_prime_UTR	478384	478552	.	+	.	Parent=Os01t0108600-01
chr01	irgsp1_rep	CDS	478553	478816	.	+	.	Parent=Os01t0108600-01
chr01	irgsp1_rep	CDS	480312	480413	.	+	.	Parent=Os01t0108600-01
chr01	irgsp1_rep	CDS	480470	480754	.	+	.	Parent=Os01t0108600-01
chr01	irgsp1_rep	three_prime_UTR	480755	481099	.	+	.	Parent=Os01t0108600-01
chr01	irgsp1_rep	mRNA	478488	481165	.	+	.	ID=Os01t0108600-02;Name=Os01t0108600-02;Locus_id=Os01g0108600;Note=Hypothetical conserved gene.;Transcript_evidence=AK109432 (DDBJ, Best hit);ORF_evidence=B8ACU8 (UniProt);InterPro=Helix-loop-helix DNA-binding (IPR011598);KEGG=Os01t0108600-02;NIAS_FLcDNA=006-308-A12;PGFD=Os01t0108600-02;IDCGP=Os01t0108600-02
chr01	irgsp1_rep	five_prime_UTR	478488	478552	.	+	.	Parent=Os01t0108600-02
chr01	irgsp1_rep	CDS	478553	478816	.	+	.	Parent=Os01t0108600-02
chr01	irgsp1_rep	CDS	480312	480722	.	+	.	Parent=Os01t0108600-02
chr01	irgsp1_rep	three_prime_UTR	480723	481165	.	+	.	Parent=Os01t0108600-02
chr01	irgsp1_rep	mRNA	482332	482955	.	+	.	ID=Os01t0108700-01;Name=Os01t0108700-01;Locus_id=Os01g0108700;Note=Hypothetical protein.;Transcript_evidence=AK111316 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os01t0108700-01;NIAS_FLcDNA=002-181-C09
chr01	irgsp1_rep	five_prime_UTR	482332	482410	.	+	.	Parent=Os01t0108700-01
chr01	irgsp1_rep	CDS	482411	482875	.	+	.	Parent=Os01t0108700-01
chr01	irgsp1_rep	three_prime_UTR	482876	482955	.	+	.	Parent=Os01t0108700-01
chr01	irgsp1_rep	mRNA	483887	486492	.	+	.	ID=Os01t0108800-01;Name=Os01t0108800-01;Locus_id=Os01g0108800;Note=Protein of unknown function DUF936, plant family protein.;Transcript_evidence=AK102103 (DDBJ, Best hit);ORF_evidence=B8ACV0 (UniProt);InterPro=Protein of unknown function DUF936, plant (IPR010341);KEGG=Os01t0108800-01;NIAS_FLcDNA=J033084B06;PGFD=Os01t0108800-01
chr01	irgsp1_rep	five_prime_UTR	483887	484013	.	+	.	Parent=Os01t0108800-01
chr01	irgsp1_rep	five_prime_UTR	484101	484115	.	+	.	Parent=Os01t0108800-01
chr01	irgsp1_rep	CDS	484116	484811	.	+	.	Parent=Os01t0108800-01
chr01	irgsp1_rep	three_prime_UTR	484812	485262	.	+	.	Parent=Os01t0108800-01
chr01	irgsp1_rep	three_prime_UTR	485410	486492	.	+	.	Parent=Os01t0108800-01
chr01	irgsp1_rep	mRNA	495711	497253	.	-	.	ID=Os01t0109000-01;Name=Os01t0109000-01;Locus_id=Os01g0109000;Note=Similar to Late embryogenesis abundant protein, group 3.;Transcript_evidence=AK120074 (DDBJ, Best hit);ORF_evidence=A2Y720 (UniProt);NIAS_FLcDNA=J013007J15
chr01	irgsp1_rep	five_prime_UTR	496377	497253	.	-	.	Parent=Os01t0109000-01
chr01	irgsp1_rep	five_prime_UTR	496226	496291	.	-	.	Parent=Os01t0109000-01
chr01	irgsp1_rep	CDS	495959	496225	.	-	.	Parent=Os01t0109000-01
chr01	irgsp1_rep	three_prime_UTR	495711	495958	.	-	.	Parent=Os01t0109000-01
chr01	irgsp1_rep	mRNA	498612	506251	.	-	.	ID=Os01t0109201-01;Name=Os01t0109201-01;Locus_id=Os01g0109201;Note=Hypothetical gene.;Transcript_evidence=AK241068 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os01t0109201-01;NIAS_FLcDNA=J065066G22
chr01	irgsp1_rep	five_prime_UTR	505705	506251	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	five_prime_UTR	505533	505614	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	CDS	505504	505532	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	CDS	505411	505426	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	CDS	505215	505306	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	CDS	505048	505128	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	CDS	504874	504880	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	504779	504873	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	504606	504698	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	504439	504512	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	504285	504340	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	503547	503609	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	503383	503450	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	503251	503289	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	502910	503000	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	502475	502559	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	502356	502407	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	502156	502262	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	500576	500598	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	500444	500481	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	three_prime_UTR	498612	498922	.	-	.	Parent=Os01t0109201-01
chr01	irgsp1_rep	mRNA	498668	506233	.	+	.	ID=Os01t0109300-01;Name=Os01t0109300-01;Locus_id=Os01g0109300;Note=Similar to predicted protein.;Transcript_evidence=AK242985 (DDBJ, Best hit);ORF_evidence=XP_002868662.1 (RefSeq);InterPro=Metal-dependent phosphohydrolase, HD domain (IPR003607),Metal-dependent phosphohydrolase, HD subdomain (IPR006674),HD domain (IPR023279);GO=Molecular Function: catalytic activity (GO:0003824),Molecular Function: phosphoric diester hydrolase activity (GO:0008081),Molecular Function: metal ion binding (GO:0046872);KEGG=Os01t0109300-01;NIAS_FLcDNA=J090094N05;PGFD=Os01t0109300-01;IDCGP=Os01t0109300-01
chr01	irgsp1_rep	five_prime_UTR	498668	498727	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	498728	498922	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	500444	500481	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	500576	500598	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	502156	502262	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	502356	502407	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	502475	502559	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	502910	503000	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	503251	503289	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	503383	503450	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	503547	503609	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	504285	504340	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	504439	504512	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	504606	504698	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	504779	504880	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	505048	505128	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	505215	505306	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	505411	505426	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	505504	505614	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	CDS	505705	505809	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	three_prime_UTR	505810	506233	.	+	.	Parent=Os01t0109300-01
chr01	irgsp1_rep	mRNA	508687	509191	.	+	.	ID=Os01t0109366-00;Name=Os01t0109366-00;Locus_id=Os01g0109366;Note=Hypothetical conserved gene.;Transcript_evidence=CT834957 (DDBJ, Best hit);ORF_evidence=B9FQ15 (UniProt);KEGG=Os01t0109366-00
chr01	irgsp1_rep	five_prime_UTR	508687	508687	.	+	.	Parent=Os01t0109366-00
chr01	irgsp1_rep	CDS	508688	509008	.	+	.	Parent=Os01t0109366-00
chr01	irgsp1_rep	three_prime_UTR	509009	509191	.	+	.	Parent=Os01t0109366-00
chr01	irgsp1_rep	mRNA	509226	509803	.	-	.	ID=Os01t0109432-00;Name=Os01t0109432-00;Locus_id=Os01g0109432;Note=Hypothetical gene.;Transcript_evidence=CT835511 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os01t0109432-00
chr01	irgsp1_rep	five_prime_UTR	509692	509803	.	-	.	Parent=Os01t0109432-00
chr01	irgsp1_rep	CDS	509446	509691	.	-	.	Parent=Os01t0109432-00
chr01	irgsp1_rep	three_prime_UTR	509226	509445	.	-	.	Parent=Os01t0109432-00
chr01	irgsp1_rep	mRNA	510752	512142	.	+	.	ID=Os01t0109500-01;Name=Os01t0109500-01;Locus_id=Os01g0109500;Note=Conserved hypothetical protein.;Transcript_evidence=AK058636 (DDBJ, Best hit);ORF_evidence=A2WJT4 (UniProt);KEGG=Os01t0109500-01;NIAS_FLcDNA=001-018-D05
chr01	irgsp1_rep	five_prime_UTR	510752	510845	.	+	.	Parent=Os01t0109500-01
chr01	irgsp1_rep	CDS	510846	511556	.	+	.	Parent=Os01t0109500-01
chr01	irgsp1_rep	three_prime_UTR	511557	511596	.	+	.	Parent=Os01t0109500-01
chr01	irgsp1_rep	three_prime_UTR	511762	512142	.	+	.	Parent=Os01t0109500-01
chr01	irgsp1_rep	mRNA	513890	522448	.	-	.	ID=Os01t0109700-01;Name=Os01t0109700-01;Locus_id=Os01g0109700;Note=Similar to Paired amphipathic helix repeat-containing protein / transcription regulator-related.;Transcript_evidence=AK121497 (DDBJ, Best hit);ORF_evidence=Q1EPA1 (UniProt);InterPro=Paired amphipathic helix (IPR003822),Histone deacetylase interacting (IPR013194);GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355),Cellular Component: nucleus (GO:0005634);NIAS_FLcDNA=J033007H10
chr01	irgsp1_rep	CDS	522423	522448	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	522142	522310	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	521940	522038	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	521692	521850	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	520871	521153	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	520511	520644	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	520324	520399	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	520186	520215	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	519880	520100	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	519645	519799	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	518231	518358	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	517874	518128	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	517112	517777	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	516953	517038	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	515995	516666	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	515823	515923	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	515598	515736	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	515369	515521	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	515000	515163	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	514809	514920	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	CDS	514578	514730	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	three_prime_UTR	514558	514577	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	three_prime_UTR	513890	514458	.	-	.	Parent=Os01t0109700-01
chr01	irgsp1_rep	mRNA	524671	527980	.	-	.	ID=Os01t0109750-01;Name=Os01t0109750-01;Locus_id=Os01g0109750;Note=Paired amphipathic helix domain containing protein.;Transcript_evidence=AK242711 (DDBJ, Best hit);ORF_evidence=NP_001172127.1 (RefSeq);InterPro=Paired amphipathic helix (IPR003822);GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355),Cellular Component: nucleus (GO:0005634);KEGG=Os01t0109750-01;NIAS_FLcDNA=J090041H01;PGFD=Os01t0109750-01;IDCGP=Os01t0109750-01
chr01	irgsp1_rep	five_prime_UTR	527871	527980	.	-	.	Parent=Os01t0109750-01
chr01	irgsp1_rep	five_prime_UTR	526764	526784	.	-	.	Parent=Os01t0109750-01
chr01	irgsp1_rep	CDS	526641	526763	.	-	.	Parent=Os01t0109750-01
chr01	irgsp1_rep	CDS	525389	525469	.	-	.	Parent=Os01t0109750-01
chr01	irgsp1_rep	CDS	525101	525310	.	-	.	Parent=Os01t0109750-01
chr01	irgsp1_rep	three_prime_UTR	524671	525100	.	-	.	Parent=Os01t0109750-01
chr01	irgsp1_rep	mRNA	536973	538644	.	-	.	ID=Os01t0110050-01;Name=Os01t0110050-01;Locus_id=Os01g0110050;Note=Pi homeostasis;Transcript_evidence=AK241522 (DDBJ);ORF_evidence=NP_001172128.1 (RefSeq);NIAS_FLcDNA=J065170O10;CGSNL Gene Symbol Synonym(s)=OsPHO1%3B1 cis-NAT;CGSNL Gene Name Synonym(s)=Rice PHO1%3B1 cis-natural antisense transcript;Literature_PMID=20081045;Manual Curation=April 13, 2010
chr01	irgsp1_rep	five_prime_UTR	538499	538644	.	-	.	Parent=Os01t0110050-01
chr01	irgsp1_rep	CDS	538226	538498	.	-	.	Parent=Os01t0110050-01
chr01	irgsp1_rep	CDS	537917	538054	.	-	.	Parent=Os01t0110050-01
chr01	irgsp1_rep	three_prime_UTR	537786	537916	.	-	.	Parent=Os01t0110050-01
chr01	irgsp1_rep	three_prime_UTR	536973	537700	.	-	.	Parent=Os01t0110050-01
chr01	irgsp1_rep	mRNA	537710	543354	.	+	.	ID=Os01t0110100-01;Name=Os01t0110100-01;Locus_id=Os01g0110100;Note=Phosphate (Pi) transporter, Pi homeostasis;Transcript_evidence=AK242852 (DDBJ);ORF_evidence=Q657S5 (UniProt),B9EYU4 (manual curation);InterPro=SPX, N-terminal (IPR004331),EXS, C-terminal (IPR004342);GO=Cellular Component: integral to membrane (GO:0016021);KEGG=Os01t0110100-01;NIAS_FLcDNA=J090073D03;CGSNL Gene Symbol Synonym(s)=OsPHO1%3B1;CGSNL Gene Name Synonym(s)=Rice PHO1%3B1 gene;Literature_PMID=20081045;Manual Curation=April 12, 2010;PGFD=Os01t0110100-01;IDCGP=Os01t0110100-01
chr01	irgsp1_rep	five_prime_UTR	537710	537786	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	537787	538068	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	538193	538493	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	539848	540241	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	540345	540595	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	540678	540798	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	540893	541133	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	541341	541445	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	541571	541615	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	541738	541890	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	542132	542410	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	542705	542841	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	CDS	542975	543065	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	three_prime_UTR	543066	543354	.	+	.	Parent=Os01t0110100-01
chr01	irgsp1_rep	mRNA	543425	544510	.	-	.	ID=Os01t0110200-01;Name=Os01t0110200-01;Locus_id=Os01g0110200;Note=Conserved hypothetical protein.;Transcript_evidence=AK109646 (DDBJ, Best hit);ORF_evidence=A2WJU1 (UniProt);KEGG=Os01t0110200-01;NIAS_FLcDNA=002-138-H09
chr01	irgsp1_rep	five_prime_UTR	544442	544510	.	-	.	Parent=Os01t0110200-01
chr01	irgsp1_rep	CDS	543803	544441	.	-	.	Parent=Os01t0110200-01
chr01	irgsp1_rep	CDS	543603	543686	.	-	.	Parent=Os01t0110200-01
chr01	irgsp1_rep	three_prime_UTR	543425	543602	.	-	.	Parent=Os01t0110200-01
chr01	irgsp1_rep	mRNA	549157	552574	.	+	.	ID=Os01t0110400-01;Name=Os01t0110400-01;Locus_id=Os01g0110400;Note=Similar to Acetyl-CoA C-acetyltransferase.;Transcript_evidence=AK101017 (DDBJ, Best hit),AK103194 (DDBJ, Best hit);ORF_evidence=B4FYM0 (UniProt);InterPro=Thiolase (IPR002155),Thiolase-like, subgroup (IPR016038),Thiolase-like (IPR016039),Thiolase, active site (IPR020610),Thiolase, conserved site (IPR020613),Thiolase, acyl-enzyme intermediate active site (IPR020615),Thiolase, N-terminal (IPR020616),Thiolase, C-terminal (IPR020617);GO=Biological Process: metabolic process (GO:0008152),Molecular Function: catalytic activity (GO:0003824),Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);KEGG=Os01t0110400-01 (EC:2.3.1.9);NIAS_FLcDNA=J023149F12,J033121P11;PGFD=Os01t0110400-01;IDCGP=Os01t0110400-01
chr01	irgsp1_rep	five_prime_UTR	549157	549254	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	549255	549399	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	549478	549651	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	549787	549892	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	549992	550130	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	550216	550293	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	550395	550460	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	550690	550772	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	551102	551201	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	551417	551527	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	551614	551655	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	551739	551825	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	552033	552118	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	CDS	552333	552366	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	three_prime_UTR	552367	552574	.	+	.	Parent=Os01t0110400-01
chr01	irgsp1_rep	mRNA	554025	558015	.	-	.	ID=Os01t0110500-01;Name=Os01t0110500-01;Locus_id=Os01g0110500;Note=Protein kinase, core domain containing protein.;Transcript_evidence=AK101096 (DDBJ, Best hit);ORF_evidence=Q1EP18 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0110500-01;NIAS_FLcDNA=J033024N16;PGFD=Os01t0110500-01
chr01	irgsp1_rep	five_prime_UTR	557306	558015	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	CDS	556351	557305	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	CDS	555854	556237	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	CDS	555676	555762	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	CDS	555525	555595	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	CDS	555368	555444	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	CDS	555136	555283	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	CDS	554589	554750	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	CDS	554300	554512	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	three_prime_UTR	554025	554299	.	-	.	Parent=Os01t0110500-01
chr01	irgsp1_rep	mRNA	554334	557257	.	+	.	ID=Os01t0110600-00;Name=Os01t0110600-00;Locus_id=Os01g0110600;Note=Hypothetical protein.;Transcript_evidence=tplb0028p02 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	554334	554510	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	five_prime_UTR	554587	554733	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	five_prime_UTR	555119	555278	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	five_prime_UTR	555364	555437	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	five_prime_UTR	555518	555594	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	five_prime_UTR	555675	555759	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	five_prime_UTR	555841	556221	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	five_prime_UTR	556466	556484	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	CDS	556485	557257	.	+	.	Parent=Os01t0110600-00
chr01	irgsp1_rep	mRNA	562088	572092	.	-	.	ID=Os01t0110700-01;Name=Os01t0110700-01;Locus_id=Os01g0110700;Note=Similar to Phosphoenolpyruvate carboxylase (EC 4.1.1.31).;Transcript_evidence=AK100688 (DDBJ, Best hit);ORF_evidence=A6YM33 (UniProt);InterPro=Pyruvate/Phosphoenolpyruvate kinase (IPR015813),Phosphoenolpyruvate carboxylase, active site (IPR018129),Phosphoenolpyruvate carboxylase (IPR021135);GO=Biological Process: tricarboxylic acid cycle (GO:0006099),Biological Process: carbon fixation (GO:0015977),Molecular Function: catalytic activity (GO:0003824),Molecular Function: phosphoenolpyruvate carboxylase activity (GO:0008964);KEGG=Os01t0110700-01 (EC:4.1.1.31);NIAS_FLcDNA=J023114C19;PGFD=Os01t0110700-01;IDCGP=Os01t0110700-01
chr01	irgsp1_rep	five_prime_UTR	572003	572092	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	571847	572002	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	571614	571777	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	570589	570703	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	570380	570457	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	570229	570297	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	570070	570148	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	569924	570000	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	569735	569830	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	569426	569567	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	568618	568746	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	567249	567310	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	566713	566928	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	566156	566281	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	565750	565851	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	565476	565622	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	564310	564408	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	563996	564084	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	563517	563643	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	563219	563425	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	CDS	562304	563131	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	three_prime_UTR	562088	562303	.	-	.	Parent=Os01t0110700-01
chr01	irgsp1_rep	mRNA	562138	569556	.	-	.	ID=Os01t0110700-02;Name=Os01t0110700-02;Locus_id=Os01g0110700;Note=Similar to Phosphoenolpyruvate carboxylase.;Transcript_evidence=AK119573 (DDBJ, Best hit);ORF_evidence=A6YM33 (UniProt);InterPro=Pyruvate/Phosphoenolpyruvate kinase (IPR015813),Phosphoenolpyruvate carboxylase, active site (IPR018129),Phosphoenolpyruvate carboxylase (IPR021135);GO=Biological Process: tricarboxylic acid cycle (GO:0006099),Biological Process: carbon fixation (GO:0015977),Molecular Function: catalytic activity (GO:0003824),Molecular Function: phosphoenolpyruvate carboxylase activity (GO:0008964);KEGG=Os01t0110700-02 (EC:4.1.1.31);NIAS_FLcDNA=002-117-B02;PGFD=Os01t0110700-02
chr01	irgsp1_rep	five_prime_UTR	569556	569556	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	569426	569555	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	568618	568746	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	567249	567310	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	566713	566928	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	566156	566281	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	565750	565851	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	565476	565622	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	564310	564408	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	563996	564084	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	563517	563643	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	563219	563425	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	CDS	562304	563131	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	three_prime_UTR	562138	562303	.	-	.	Parent=Os01t0110700-02
chr01	irgsp1_rep	mRNA	576495	579569	.	-	.	ID=Os01t0110800-01;Name=Os01t0110800-01;Locus_id=Os01g0110800;Note=Leucine-rich repeat, plant specific containing protein.;Transcript_evidence=AK065190 (DDBJ, Best hit);ORF_evidence=B8ACV6 (UniProt);InterPro=Leucine-rich repeat (IPR001611);GO=Molecular Function: protein binding (GO:0005515);KEGG=Os01t0110800-01;NIAS_FLcDNA=J013002E08;PGFD=Os01t0110800-01;IDCGP=Os01t0110800-01
chr01	irgsp1_rep	five_prime_UTR	579279	579569	.	-	.	Parent=Os01t0110800-01
chr01	irgsp1_rep	CDS	579024	579278	.	-	.	Parent=Os01t0110800-01
chr01	irgsp1_rep	CDS	577564	577984	.	-	.	Parent=Os01t0110800-01
chr01	irgsp1_rep	CDS	576806	577482	.	-	.	Parent=Os01t0110800-01
chr01	irgsp1_rep	three_prime_UTR	576495	576805	.	-	.	Parent=Os01t0110800-01
chr01	irgsp1_rep	mRNA	585876	586445	-0.812259	+	.	ID=Os01t0111000-00;Name=Os01t0111000-00;Locus_id=Os01g0111000;Note=Pectinesterase inhibitor domain containing protein.;Transcript_evidence=ab initio prediction;ORF_evidence=Q657T2 (UniProt);InterPro=Pectinesterase inhibitor (IPR006501);GO=Molecular Function: enzyme inhibitor activity (GO:0004857),Molecular Function: pectinesterase activity (GO:0030599)
chr01	irgsp1_rep	CDS	585876	586015	-1.97335	+	0	Parent=Os01t0111000-00
chr01	irgsp1_rep	CDS	586142	586445	-1.26958	+	1	Parent=Os01t0111000-00
chr01	irgsp1_rep	mRNA	586445	587696	.	-	.	ID=Os01t0111100-01;Name=Os01t0111100-01;Locus_id=Os01g0111100;Note=Cyclophilin-like domain containing protein.;Transcript_evidence=AK065672 (DDBJ, Best hit);ORF_evidence=NP_565079.1 (RefSeq);InterPro=Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (IPR002130),Cyclophilin-like (IPR015891);GO=Biological Process: protein folding (GO:0006457),Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755);KEGG=Os01t0111100-01 (EC:5.2.1.8);NIAS_FLcDNA=J013039E22;PGFD=Os01t0111100-01;IDCGP=Os01t0111100-01
chr01	irgsp1_rep	five_prime_UTR	587688	587696	.	-	.	Parent=Os01t0111100-01
chr01	irgsp1_rep	CDS	586921	587687	.	-	.	Parent=Os01t0111100-01
chr01	irgsp1_rep	CDS	586670	586787	.	-	.	Parent=Os01t0111100-01
chr01	irgsp1_rep	three_prime_UTR	586445	586669	.	-	.	Parent=Os01t0111100-01
chr01	irgsp1_rep	mRNA	588917	593714	.	+	.	ID=Os01t0111200-01;Name=Os01t0111200-01;Locus_id=Os01g0111200;Note=Like-Sm ribonucleoprotein (LSM)-related domain domain containing protein.;Transcript_evidence=AK102802 (DDBJ, Best hit);ORF_evidence=B8ACV9 (UniProt);InterPro=Like-Sm ribonucleoprotein (LSM)-related domain (IPR010920),DFDF motif (IPR019050),FFD/TFG box motif (IPR019053);KEGG=Os01t0111200-01;NIAS_FLcDNA=J033108G08;PGFD=Os01t0111200-01
chr01	irgsp1_rep	five_prime_UTR	588917	588974	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	CDS	588975	589179	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	CDS	589506	589606	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	CDS	590087	590167	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	CDS	590240	591178	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	CDS	591837	591902	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	CDS	592659	592853	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	CDS	592939	593049	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	CDS	593116	593280	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	three_prime_UTR	593281	593714	.	+	.	Parent=Os01t0111200-01
chr01	irgsp1_rep	mRNA	597009	597804	.	+	.	ID=Os01t0111300-01;Name=Os01t0111300-01;Locus_id=Os01g0111300;Note=Conserved hypothetical protein.;Transcript_evidence=AK105004 (DDBJ, Best hit);ORF_evidence=Q6L578 (UniProt);NIAS_FLcDNA=001-006-B03
chr01	irgsp1_rep	five_prime_UTR	597009	597345	.	+	.	Parent=Os01t0111300-01
chr01	irgsp1_rep	CDS	597346	597507	.	+	.	Parent=Os01t0111300-01
chr01	irgsp1_rep	three_prime_UTR	597508	597804	.	+	.	Parent=Os01t0111300-01
chr01	irgsp1_rep	mRNA	598290	601457	.	+	.	ID=Os01t0111400-01;Name=Os01t0111400-01;Locus_id=Os01g0111400;Note=Zinc finger, BED-type predicted domain containing protein.;Transcript_evidence=AK066455 (DDBJ, Best hit);ORF_evidence=NP_001147568.1 (RefSeq);InterPro=Zinc finger, BED-type predicted (IPR003656),HAT dimerisation (IPR008906),Ribonuclease H-like (IPR012337);GO=Molecular Function: nucleic acid binding (GO:0003676),Molecular Function: DNA binding (GO:0003677),Molecular Function: protein dimerization activity (GO:0046983);KEGG=Os01t0111400-01;NIAS_FLcDNA=J013063C15;PGFD=Os01t0111400-01;IDCGP=Os01t0111400-01
chr01	irgsp1_rep	five_prime_UTR	598290	598479	.	+	.	Parent=Os01t0111400-01
chr01	irgsp1_rep	five_prime_UTR	598707	598717	.	+	.	Parent=Os01t0111400-01
chr01	irgsp1_rep	CDS	598718	598940	.	+	.	Parent=Os01t0111400-01
chr01	irgsp1_rep	CDS	599229	600211	.	+	.	Parent=Os01t0111400-01
chr01	irgsp1_rep	CDS	600306	601205	.	+	.	Parent=Os01t0111400-01
chr01	irgsp1_rep	three_prime_UTR	601206	601457	.	+	.	Parent=Os01t0111400-01
chr01	irgsp1_rep	mRNA	598300	601467	.	+	.	ID=Os01t0111400-02;Name=Os01t0111400-02;Locus_id=Os01g0111400;Note=Similar to transposon protein.;Transcript_evidence=AK067704 (DDBJ, Best hit);ORF_evidence=NP_001147568.1 (RefSeq);InterPro=Zinc finger, BED-type predicted (IPR003656),Ribonuclease H-like (IPR012337);GO=Molecular Function: nucleic acid binding (GO:0003676),Molecular Function: DNA binding (GO:0003677);KEGG=Os01t0111400-02;NIAS_FLcDNA=J013116N12;PGFD=Os01t0111400-02;IDCGP=Os01t0111400-02
chr01	irgsp1_rep	five_prime_UTR	598300	598301	.	+	.	Parent=Os01t0111400-02
chr01	irgsp1_rep	CDS	598302	598479	.	+	.	Parent=Os01t0111400-02
chr01	irgsp1_rep	CDS	598764	598940	.	+	.	Parent=Os01t0111400-02
chr01	irgsp1_rep	CDS	599229	600238	.	+	.	Parent=Os01t0111400-02
chr01	irgsp1_rep	three_prime_UTR	600239	601467	.	+	.	Parent=Os01t0111400-02
chr01	irgsp1_rep	mRNA	603643	605643	.	-	.	ID=Os01t0111500-01;Name=Os01t0111500-01;Locus_id=Os01g0111500;Note=Basic helix-loop-helix dimerisation region bHLH domain containing protein.;Transcript_evidence=AK108587 (DDBJ, Best hit);ORF_evidence=NP_176820.1 (RefSeq);InterPro=Helix-loop-helix DNA-binding (IPR011598);KEGG=Os01t0111500-01;NIAS_FLcDNA=002-146-B03;PGFD=Os01t0111500-01;IDCGP=Os01t0111500-01
chr01	irgsp1_rep	five_prime_UTR	605433	605643	.	-	.	Parent=Os01t0111500-01
chr01	irgsp1_rep	CDS	604932	605432	.	-	.	Parent=Os01t0111500-01
chr01	irgsp1_rep	CDS	604681	604824	.	-	.	Parent=Os01t0111500-01
chr01	irgsp1_rep	CDS	604489	604554	.	-	.	Parent=Os01t0111500-01
chr01	irgsp1_rep	CDS	604302	604367	.	-	.	Parent=Os01t0111500-01
chr01	irgsp1_rep	CDS	604019	604129	.	-	.	Parent=Os01t0111500-01
chr01	irgsp1_rep	three_prime_UTR	603643	604018	.	-	.	Parent=Os01t0111500-01
chr01	irgsp1_rep	mRNA	612564	615631	.	+	.	ID=Os01t0111600-01;Name=Os01t0111600-01;Locus_id=Os01g0111600;Note=Similar to MOTHER of FT and TF1 protein.;Transcript_evidence=AK110620 (DDBJ, Best hit);ORF_evidence=A9LLY3 (UniProt);InterPro=Phosphatidylethanolamine-binding, conserved site (IPR001858),Phosphatidylethanolamine-binding protein PEBP (IPR008914);KEGG=Os01t0111600-01;NIAS_FLcDNA=002-169-A04;PGFD=Os01t0111600-01
chr01	irgsp1_rep	five_prime_UTR	612564	612716	.	+	.	Parent=Os01t0111600-01
chr01	irgsp1_rep	CDS	612717	612911	.	+	.	Parent=Os01t0111600-01
chr01	irgsp1_rep	CDS	613017	613078	.	+	.	Parent=Os01t0111600-01
chr01	irgsp1_rep	CDS	613423	613463	.	+	.	Parent=Os01t0111600-01
chr01	irgsp1_rep	CDS	615047	615273	.	+	.	Parent=Os01t0111600-01
chr01	irgsp1_rep	three_prime_UTR	615274	615631	.	+	.	Parent=Os01t0111600-01
chr01	irgsp1_rep	mRNA	620572	621516	.	-	.	ID=Os01t0111700-01;Name=Os01t0111700-01;Locus_id=Os01g0111700;Note=Conserved hypothetical protein.;Transcript_evidence=AK108920 (DDBJ, Best hit);ORF_evidence=A2WJV3 (UniProt);KEGG=Os01t0111700-01;NIAS_FLcDNA=002-152-H07;PGFD=Os01t0111700-01
chr01	irgsp1_rep	five_prime_UTR	621463	621516	.	-	.	Parent=Os01t0111700-01
chr01	irgsp1_rep	CDS	620935	621462	.	-	.	Parent=Os01t0111700-01
chr01	irgsp1_rep	three_prime_UTR	620572	620934	.	-	.	Parent=Os01t0111700-01
chr01	irgsp1_rep	mRNA	624087	624613	.	+	.	ID=Os01t0111800-01;Name=Os01t0111800-01;Locus_id=Os01g0111800;Note=Conserved hypothetical protein.;Transcript_evidence=AK059312 (DDBJ, Best hit);ORF_evidence=B8ACW1 (UniProt);KEGG=Os01t0111800-01;NIAS_FLcDNA=001-025-G10;PGFD=Os01t0111800-01
chr01	irgsp1_rep	five_prime_UTR	624087	624134	.	+	.	Parent=Os01t0111800-01
chr01	irgsp1_rep	CDS	624135	624470	.	+	.	Parent=Os01t0111800-01
chr01	irgsp1_rep	three_prime_UTR	624471	624613	.	+	.	Parent=Os01t0111800-01
chr01	irgsp1_rep	mRNA	624123	624759	.	+	.	ID=Os01t0111800-02;Name=Os01t0111800-02;Locus_id=Os01g0111800;Note=Conserved hypothetical protein.;Transcript_evidence=AK071433 (DDBJ, Best hit);ORF_evidence=B8ACW1 (UniProt);KEGG=Os01t0111800-02;NIAS_FLcDNA=J023093B16;PGFD=Os01t0111800-02
chr01	irgsp1_rep	five_prime_UTR	624123	624134	.	+	.	Parent=Os01t0111800-02
chr01	irgsp1_rep	CDS	624135	624470	.	+	.	Parent=Os01t0111800-02
chr01	irgsp1_rep	three_prime_UTR	624471	624759	.	+	.	Parent=Os01t0111800-02
chr01	irgsp1_rep	mRNA	625986	627009	.	+	.	ID=Os01t0111900-01;Name=Os01t0111900-01;Locus_id=Os01g0111900;Note=Glutelin family protein.;Transcript_evidence=AK103326 (DDBJ, Best hit);ORF_evidence=NP_001149355.1 (RefSeq);KEGG=Os01t0111900-01;NIAS_FLcDNA=J033125L13;PGFD=Os01t0111900-01
chr01	irgsp1_rep	five_prime_UTR	625986	626197	.	+	.	Parent=Os01t0111900-01
chr01	irgsp1_rep	CDS	626198	626719	.	+	.	Parent=Os01t0111900-01
chr01	irgsp1_rep	three_prime_UTR	626720	627009	.	+	.	Parent=Os01t0111900-01
chr01	irgsp1_rep	mRNA	632139	632790	.	+	.	ID=Os01t0112000-01;Name=Os01t0112000-01;Locus_id=Os01g0112000;Note=Conserved hypothetical protein.;Transcript_evidence=AK103623 (DDBJ, Best hit);ORF_evidence=A2ZNG6 (UniProt);KEGG=Os01t0112000-01;NIAS_FLcDNA=J033133N12
chr01	irgsp1_rep	five_prime_UTR	632139	632195	.	+	.	Parent=Os01t0112000-01
chr01	irgsp1_rep	CDS	632196	632675	.	+	.	Parent=Os01t0112000-01
chr01	irgsp1_rep	three_prime_UTR	632676	632790	.	+	.	Parent=Os01t0112000-01
chr01	irgsp1_rep	mRNA	634040	634757	.	-	.	ID=Os01t0112050-01;Name=Os01t0112050-01;Locus_id=Os01g0112050;Note=Non-protein coding transcript.;Transcript_evidence=AK287520 (DDBJ, Best hit);ORF_evidence=NONE;NIAS_FLcDNA=J053044N13
chr01	irgsp1_rep	exon	634040	634757	.	-	.	Parent=Os01t0112050-01
chr01	irgsp1_rep	mRNA	635325	639015	.	-	.	ID=Os01t0112100-01;Name=Os01t0112100-01;Locus_id=Os01g0112100;Note=Conserved hypothetical protein.;Transcript_evidence=AK100946 (DDBJ, Best hit),AK070580 (DDBJ, Best hit);ORF_evidence=A2WJV7 (UniProt);KEGG=Os01t0112100-01;NIAS_FLcDNA=J023138H16,J023061N16;PGFD=Os01t0112100-01;IDCGP=Os01t0112100-01
chr01	irgsp1_rep	five_prime_UTR	638966	639015	.	-	.	Parent=Os01t0112100-01
chr01	irgsp1_rep	CDS	637835	638965	.	-	.	Parent=Os01t0112100-01
chr01	irgsp1_rep	three_prime_UTR	635325	637834	.	-	.	Parent=Os01t0112100-01
chr01	irgsp1_rep	mRNA	637962	639060	.	+	.	ID=Os01t0112201-01;Name=Os01t0112201-01;Locus_id=Os01g0112201;Note=Hypothetical protein.;Transcript_evidence=AK240920 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os01t0112201-01;NIAS_FLcDNA=J065038E03
chr01	irgsp1_rep	five_prime_UTR	637962	638645	.	+	.	Parent=Os01t0112201-01
chr01	irgsp1_rep	CDS	638646	639017	.	+	.	Parent=Os01t0112201-01
chr01	irgsp1_rep	three_prime_UTR	639018	639060	.	+	.	Parent=Os01t0112201-01
chr01	irgsp1_rep	mRNA	640698	644217	.	-	.	ID=Os01t0112300-01;Name=Os01t0112300-01;Locus_id=Os01g0112300;Note=Hypothetical conserved gene.;Transcript_evidence=AK242069 (DDBJ, Best hit);ORF_evidence=B9EYV6 (UniProt);KEGG=Os01t0112300-01;NIAS_FLcDNA=J075132O17;PGFD=Os01t0112300-01
chr01	irgsp1_rep	five_prime_UTR	644114	644217	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	CDS	644077	644113	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	CDS	643497	643573	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	CDS	643109	643396	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	642643	643108	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	642343	642444	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	642141	642230	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	641972	642046	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	641826	641858	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	641655	641718	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	641465	641520	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	641290	641379	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	three_prime_UTR	640698	641192	.	-	.	Parent=Os01t0112300-01
chr01	irgsp1_rep	mRNA	645598	646722	.	-	.	ID=Os01t0112400-01;Name=Os01t0112400-01;Locus_id=Os01g0112400;Note=Major intrinsic protein family protein.;Transcript_evidence=AK106825 (DDBJ, Best hit);ORF_evidence=Q9ASI1 (UniProt);InterPro=Major intrinsic protein (IPR000425),Major intrinsic protein, conserved site (IPR022357),Aquaporin-like (IPR023271);GO=Biological Process: transport (GO:0006810),Cellular Component: membrane (GO:0016020),Molecular Function: transporter activity (GO:0005215);KEGG=Os01t0112400-01;NIAS_FLcDNA=002-116-E11;Oryzabase=8526;CGSNL Gene Symbol=NIP4%3B1;CGSNL Gene Name=NOD26 LIKE INTRINSIC PROTEIN 4%3B1;CGSNL Gene Symbol Synonym(s)=OsNIP4%3B1, NIP4-1;CGSNL Gene Name Synonym(s)=Aquaporin NIP4-1, NOD26-like intrinsic protein 4-1;PGFD=Os01t0112400-01;IDCGP=Os01t0112400-01
chr01	irgsp1_rep	five_prime_UTR	646698	646722	.	-	.	Parent=Os01t0112400-01
chr01	irgsp1_rep	CDS	646524	646697	.	-	.	Parent=Os01t0112400-01
chr01	irgsp1_rep	CDS	645732	646418	.	-	.	Parent=Os01t0112400-01
chr01	irgsp1_rep	three_prime_UTR	645598	645731	.	-	.	Parent=Os01t0112400-01
chr01	irgsp1_rep	mRNA	648288	651869	.	-	.	ID=Os01t0112500-01;Name=Os01t0112500-01;Locus_id=Os01g0112500;Note=Similar to Plakoglobin/armadillo/beta-catenin-like protein (Fragment).;Transcript_evidence=AK120201 (DDBJ, Best hit);ORF_evidence=Q71VM2 (UniProt);InterPro=Armadillo (IPR000225),Armadillo-like helical (IPR011989),Armadillo-type fold (IPR016024);GO=Molecular Function: binding (GO:0005488),Molecular Function: protein binding (GO:0005515);NIAS_FLcDNA=J013037I12
chr01	irgsp1_rep	five_prime_UTR	651746	651869	.	-	.	Parent=Os01t0112500-01
chr01	irgsp1_rep	CDS	651477	651745	.	-	.	Parent=Os01t0112500-01
chr01	irgsp1_rep	CDS	648528	649329	.	-	.	Parent=Os01t0112500-01
chr01	irgsp1_rep	three_prime_UTR	648288	648527	.	-	.	Parent=Os01t0112500-01
chr01	irgsp1_rep	mRNA	648288	649131	.	-	.	ID=Os01t0112500-02;Name=Os01t0112500-02;Locus_id=Os01g0112500;Note=Similar to Plakoglobin/armadillo/beta-catenin-like protein (Fragment).;Transcript_evidence=AK058409 (DDBJ, Best hit);ORF_evidence=Q71VM2 (UniProt);InterPro=Armadillo-like helical (IPR011989),Armadillo-type fold (IPR016024);GO=Molecular Function: binding (GO:0005488);NIAS_FLcDNA=001-015-C05
chr01	irgsp1_rep	five_prime_UTR	649131	649131	.	-	.	Parent=Os01t0112500-02
chr01	irgsp1_rep	CDS	648528	649130	.	-	.	Parent=Os01t0112500-02
chr01	irgsp1_rep	three_prime_UTR	648288	648527	.	-	.	Parent=Os01t0112500-02
chr01	irgsp1_rep	mRNA	677029	677602	.	+	.	ID=Os01t0112600-01;Name=Os01t0112600-01;Locus_id=Os01g0112600;Note=Conserved hypothetical protein.;Transcript_evidence=AK241069 (DDBJ, Best hit);ORF_evidence=NP_001172135.1 (RefSeq);KEGG=Os01t0112600-01;NIAS_FLcDNA=J065066I06
chr01	irgsp1_rep	five_prime_UTR	677029	677079	.	+	.	Parent=Os01t0112600-01
chr01	irgsp1_rep	CDS	677080	677337	.	+	.	Parent=Os01t0112600-01
chr01	irgsp1_rep	three_prime_UTR	677338	677602	.	+	.	Parent=Os01t0112600-01
chr01	irgsp1_rep	mRNA	689788	693923	.	+	.	ID=Os01t0112800-00;Name=Os01t0112800-00;Locus_id=Os01g0112800;Note=Disease resistance protein domain containing protein.;Transcript_evidence=AK367884 (DDBJ);ORF_evidence=NP_001172136.1 (RefSeq);InterPro=Disease resistance protein (IPR000767),NB-ARC (IPR002182);GO=Biological Process: defense response (GO:0006952),Molecular Function: ADP binding (GO:0043531)
chr01	irgsp1_rep	five_prime_UTR	689788	689791	.	+	.	Parent=Os01t0112800-00
chr01	irgsp1_rep	CDS	689792	692536	.	+	.	Parent=Os01t0112800-00
chr01	irgsp1_rep	three_prime_UTR	692537	692816	.	+	.	Parent=Os01t0112800-00
chr01	irgsp1_rep	three_prime_UTR	693222	693923	.	+	.	Parent=Os01t0112800-00
chr01	irgsp1_rep	mRNA	700533	706399	-0.813117	-	.	ID=Os01t0113000-00;Name=Os01t0113000-00;Locus_id=Os01g0113000;Note=Hypothetical conserved gene.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001041816.1 (RefSeq);InterPro=Peptidase C48, SUMO/Sentrin/Ubl1 (IPR003653);GO=Biological Process: proteolysis (GO:0006508),Molecular Function: cysteine-type peptidase activity (GO:0008234);KEGG=Os01t0113000-00;PGFD=Os01t0113000-00;IDCGP=Os01t0113000-00
chr01	irgsp1_rep	CDS	706361	706399	-2.0934	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	706104	706302	-1.6826	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	705796	705841	-2.75864	-	2	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	704714	705677	-1.9109	-	1	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	704497	704640	-2.74709	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	704328	704414	-2.03523	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	703905	704239	-2.03523	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	703308	703548	-2.03523	-	1	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	703153	703227	-2.03523	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	702938	703078	-2.19138	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	702759	702853	-2.34401	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	702487	702559	-2.03523	-	1	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	701547	702373	-2.03523	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	701298	701469	-2.03523	-	1	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	701134	701220	-2.03523	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	700738	700827	-2.24688	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	CDS	700533	700643	-2.54661	-	0	Parent=Os01t0113000-00
chr01	irgsp1_rep	mRNA	710956	714232	.	+	.	ID=Os01t0113150-00;Name=Os01t0113150-00;Locus_id=Os01g0113150;Note=Disease resistance protein domain containing protein.;Transcript_evidence=AK367884 (DDBJ);ORF_evidence=A2ZNH1 (UniProt);InterPro=Disease resistance protein (IPR000767),NB-ARC (IPR002182);GO=Biological Process: defense response (GO:0006952),Molecular Function: ADP binding (GO:0043531)
chr01	irgsp1_rep	CDS	710956	712845	.	+	.	Parent=Os01t0113150-00
chr01	irgsp1_rep	three_prime_UTR	712846	713125	.	+	.	Parent=Os01t0113150-00
chr01	irgsp1_rep	three_prime_UTR	713531	714232	.	+	.	Parent=Os01t0113150-00
chr01	irgsp1_rep	mRNA	720673	723317	.	-	.	ID=Os01t0113200-01;Name=Os01t0113200-01;Locus_id=Os01g0113200;Note=Similar to Receptor serine/threonine kinase.;Transcript_evidence=AK241355 (DDBJ, Best hit);ORF_evidence=O49202 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0113200-01;NIAS_FLcDNA=J065150L24;PGFD=Os01t0113200-01;IDCGP=Os01t0113200-01
chr01	irgsp1_rep	five_prime_UTR	723284	723317	.	-	.	Parent=Os01t0113200-01
chr01	irgsp1_rep	CDS	722521	723283	.	-	.	Parent=Os01t0113200-01
chr01	irgsp1_rep	CDS	722042	722071	.	-	.	Parent=Os01t0113200-01
chr01	irgsp1_rep	CDS	721524	721902	.	-	.	Parent=Os01t0113200-01
chr01	irgsp1_rep	CDS	721386	721410	.	-	.	Parent=Os01t0113200-01
chr01	irgsp1_rep	three_prime_UTR	720673	721385	.	-	.	Parent=Os01t0113200-01
chr01	irgsp1_rep	mRNA	723693	726099	.	+	.	ID=Os01t0113300-01;Name=Os01t0113300-01;Locus_id=Os01g0113300;Note=Similar to ARK protein (Fragment).;Transcript_evidence=AK111565 (DDBJ, Best hit);ORF_evidence=Q9XGE8 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Concanavalin A-like lectin/glucanase, subgroup (IPR013320),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0113300-01;NIAS_FLcDNA=J013071F06;PGFD=Os01t0113300-01
chr01	irgsp1_rep	five_prime_UTR	723693	723743	.	+	.	Parent=Os01t0113300-01
chr01	irgsp1_rep	CDS	723744	724459	.	+	.	Parent=Os01t0113300-01
chr01	irgsp1_rep	CDS	724542	724711	.	+	.	Parent=Os01t0113300-01
chr01	irgsp1_rep	CDS	724792	725885	.	+	.	Parent=Os01t0113300-01
chr01	irgsp1_rep	three_prime_UTR	725886	726099	.	+	.	Parent=Os01t0113300-01
chr01	irgsp1_rep	mRNA	723736	725885	.	-	.	ID=Os01t0113325-00;Name=Os01t0113325-00;Locus_id=Os01g0113325;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	725854	725885	.	-	.	Parent=Os01t0113325-00
chr01	irgsp1_rep	CDS	725356	725853	.	-	.	Parent=Os01t0113325-00
chr01	irgsp1_rep	three_prime_UTR	724739	725355	.	-	.	Parent=Os01t0113325-00
chr01	irgsp1_rep	three_prime_UTR	723736	724674	.	-	.	Parent=Os01t0113325-00
chr01	irgsp1_rep	mRNA	728968	731172	.	+	.	ID=Os01t0113350-00;Name=Os01t0113350-00;Locus_id=Os01g0113350;Note=Hypothetical conserved gene.;Transcript_evidence=AK362159 (DDBJ);ORF_evidence=NP_001147808.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Thaumatin, pathogenesis-related (IPR001938),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);PGFD=Os01t0113350-00
chr01	irgsp1_rep	CDS	728968	730926	.	+	.	Parent=Os01t0113350-00
chr01	irgsp1_rep	three_prime_UTR	730927	731172	.	+	.	Parent=Os01t0113350-00
chr01	irgsp1_rep	mRNA	731303	738020	.	-	.	ID=Os01t0113400-01;Name=Os01t0113400-01;Locus_id=Os01g0113400;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK073168 (DDBJ, Best hit);ORF_evidence=Q9LL53 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);NIAS_FLcDNA=J033023H13
chr01	irgsp1_rep	five_prime_UTR	737730	738020	.	-	.	Parent=Os01t0113400-01
chr01	irgsp1_rep	five_prime_UTR	737550	737639	.	-	.	Parent=Os01t0113400-01
chr01	irgsp1_rep	five_prime_UTR	737375	737440	.	-	.	Parent=Os01t0113400-01
chr01	irgsp1_rep	CDS	737317	737374	.	-	.	Parent=Os01t0113400-01
chr01	irgsp1_rep	CDS	733030	733681	.	-	.	Parent=Os01t0113400-01
chr01	irgsp1_rep	CDS	732695	732921	.	-	.	Parent=Os01t0113400-01
chr01	irgsp1_rep	CDS	731484	732580	.	-	.	Parent=Os01t0113400-01
chr01	irgsp1_rep	three_prime_UTR	731303	731483	.	-	.	Parent=Os01t0113400-01
chr01	irgsp1_rep	mRNA	731150	732538	.	-	.	ID=Os01t0113400-02;Name=Os01t0113400-02;Locus_id=Os01g0113400;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK059374 (DDBJ, Best hit);ORF_evidence=Q9LL53 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0113400-02;NIAS_FLcDNA=001-026-F05;PGFD=Os01t0113400-02
chr01	irgsp1_rep	five_prime_UTR	732537	732538	.	-	.	Parent=Os01t0113400-02
chr01	irgsp1_rep	CDS	731484	732536	.	-	.	Parent=Os01t0113400-02
chr01	irgsp1_rep	three_prime_UTR	731150	731483	.	-	.	Parent=Os01t0113400-02
chr01	irgsp1_rep	mRNA	731489	733719	.	+	.	ID=Os01t0113450-00;Name=Os01t0113450-00;Locus_id=Os01g0113450;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	731489	732663	.	+	.	Parent=Os01t0113450-00
chr01	irgsp1_rep	five_prime_UTR	732844	733283	.	+	.	Parent=Os01t0113450-00
chr01	irgsp1_rep	CDS	733284	733556	.	+	.	Parent=Os01t0113450-00
chr01	irgsp1_rep	three_prime_UTR	733557	733719	.	+	.	Parent=Os01t0113450-00
chr01	irgsp1_rep	mRNA	734071	737556	.	+	.	ID=Os01t0113500-01;Name=Os01t0113500-01;Locus_id=Os01g0113500;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK243318 (DDBJ, Best hit);ORF_evidence=Q9LL57 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Concanavalin A-like lectin/glucanase, subgroup (IPR013320),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0113500-01;NIAS_FLcDNA=J100056K06;PGFD=Os01t0113500-01
chr01	irgsp1_rep	five_prime_UTR	734071	734243	.	+	.	Parent=Os01t0113500-01
chr01	irgsp1_rep	CDS	734244	735060	.	+	.	Parent=Os01t0113500-01
chr01	irgsp1_rep	CDS	735779	735802	.	+	.	Parent=Os01t0113500-01
chr01	irgsp1_rep	CDS	736029	737098	.	+	.	Parent=Os01t0113500-01
chr01	irgsp1_rep	three_prime_UTR	737099	737556	.	+	.	Parent=Os01t0113500-01
chr01	irgsp1_rep	mRNA	738283	741797	.	-	.	ID=Os01t0113600-01;Name=Os01t0113600-01;Locus_id=Os01g0113600;Note=Hypothetical protein.;Transcript_evidence=AK110685 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os01t0113600-01;NIAS_FLcDNA=002-169-H09;PGFD=Os01t0113600-01
chr01	irgsp1_rep	five_prime_UTR	741653	741797	.	-	.	Parent=Os01t0113600-01
chr01	irgsp1_rep	CDS	741507	741652	.	-	.	Parent=Os01t0113600-01
chr01	irgsp1_rep	CDS	740508	740601	.	-	.	Parent=Os01t0113600-01
chr01	irgsp1_rep	three_prime_UTR	740436	740507	.	-	.	Parent=Os01t0113600-01
chr01	irgsp1_rep	three_prime_UTR	738283	738481	.	-	.	Parent=Os01t0113600-01
chr01	irgsp1_rep	mRNA	738749	741763	.	-	.	ID=Os01t0113600-02;Name=Os01t0113600-02;Locus_id=Os01g0113600;Note=Hypothetical protein.;Transcript_evidence=AK106707 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os01t0113600-02;NIAS_FLcDNA=002-114-E12;PGFD=Os01t0113600-02
chr01	irgsp1_rep	five_prime_UTR	741653	741763	.	-	.	Parent=Os01t0113600-02
chr01	irgsp1_rep	CDS	741507	741652	.	-	.	Parent=Os01t0113600-02
chr01	irgsp1_rep	CDS	740508	740601	.	-	.	Parent=Os01t0113600-02
chr01	irgsp1_rep	three_prime_UTR	738749	740507	.	-	.	Parent=Os01t0113600-02
chr01	irgsp1_rep	mRNA	738908	740898	.	+	.	ID=Os01t0113650-00;Name=Os01t0113650-00;Locus_id=Os01g0113650;Note=Hypothetical conserved gene.;Transcript_evidence=FP098335 (DDBJ);ORF_evidence=NP_001147808.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Thaumatin, pathogenesis-related (IPR001938),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Thaumatin, conserved site (IPR017949);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);PGFD=Os01t0113650-00
chr01	irgsp1_rep	five_prime_UTR	738908	738927	.	+	.	Parent=Os01t0113650-00
chr01	irgsp1_rep	CDS	738928	740898	.	+	.	Parent=Os01t0113650-00
chr01	irgsp1_rep	mRNA	742860	745177	.	-	.	ID=Os01t0113700-00;Name=Os01t0113700-00;Locus_id=Os01g0113700;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK376475 (DDBJ);ORF_evidence=Q9LL53 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	744438	745177	.	-	.	Parent=Os01t0113700-00
chr01	irgsp1_rep	CDS	744100	744320	.	-	.	Parent=Os01t0113700-00
chr01	irgsp1_rep	CDS	742881	743977	.	-	.	Parent=Os01t0113700-00
chr01	irgsp1_rep	three_prime_UTR	742860	742880	.	-	.	Parent=Os01t0113700-00
chr01	irgsp1_rep	mRNA	742883	745165	.	+	.	ID=Os01t0113750-00;Name=Os01t0113750-00;Locus_id=Os01g0113750;Note=Non-protein coding transcript.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=NONE
chr01	irgsp1_rep	exon	742883	744189	.	+	.	Parent=Os01t0113750-00
chr01	irgsp1_rep	exon	744382	745165	.	+	.	Parent=Os01t0113750-00
chr01	irgsp1_rep	mRNA	745452	748945	.	+	.	ID=Os01t0113800-01;Name=Os01t0113800-01;Locus_id=Os01g0113800;Note=Protein kinase, core domain containing protein.;Transcript_evidence=AK111700 (DDBJ, Best hit);ORF_evidence=Q9LL57 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Concanavalin A-like lectin/glucanase, subgroup (IPR013320),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0113800-01;NIAS_FLcDNA=J023005G06;PGFD=Os01t0113800-01
chr01	irgsp1_rep	five_prime_UTR	745452	745581	.	+	.	Parent=Os01t0113800-01
chr01	irgsp1_rep	CDS	745582	746380	.	+	.	Parent=Os01t0113800-01
chr01	irgsp1_rep	CDS	747107	747130	.	+	.	Parent=Os01t0113800-01
chr01	irgsp1_rep	CDS	747500	748569	.	+	.	Parent=Os01t0113800-01
chr01	irgsp1_rep	three_prime_UTR	748570	748945	.	+	.	Parent=Os01t0113800-01
chr01	irgsp1_rep	mRNA	752080	754992	.	-	.	ID=Os01t0113900-01;Name=Os01t0113900-01;Locus_id=Os01g0113900;Note=Similar to Receptor-like protein kinase.;Transcript_evidence=AK068796 (DDBJ, Best hit);ORF_evidence=Q9M574 (UniProt);NIAS_FLcDNA=J013166D14
chr01	irgsp1_rep	five_prime_UTR	754946	754992	.	-	.	Parent=Os01t0113900-01
chr01	irgsp1_rep	CDS	754188	754945	.	-	.	Parent=Os01t0113900-01
chr01	irgsp1_rep	CDS	753866	754056	.	-	.	Parent=Os01t0113900-01
chr01	irgsp1_rep	CDS	752947	753275	.	-	.	Parent=Os01t0113900-01
chr01	irgsp1_rep	three_prime_UTR	752080	752946	.	-	.	Parent=Os01t0113900-01
chr01	irgsp1_rep	mRNA	752189	754829	.	+	.	ID=Os01t0113950-00;Name=Os01t0113950-00;Locus_id=Os01g0113950;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	752189	753421	.	+	.	Parent=Os01t0113950-00
chr01	irgsp1_rep	five_prime_UTR	753869	754033	.	+	.	Parent=Os01t0113950-00
chr01	irgsp1_rep	five_prime_UTR	754229	754404	.	+	.	Parent=Os01t0113950-00
chr01	irgsp1_rep	CDS	754405	754635	.	+	.	Parent=Os01t0113950-00
chr01	irgsp1_rep	three_prime_UTR	754636	754829	.	+	.	Parent=Os01t0113950-00
chr01	irgsp1_rep	mRNA	756221	756901	.	-	.	ID=Os01t0114000-00;Name=Os01t0114000-00;Locus_id=Os01g0114000;Note=Similar to H0315A08.1 protein.;Transcript_evidence=FP099421 (DDBJ);ORF_evidence=Q01I63 (UniProt);InterPro=Ribonuclease H1, N-terminal (IPR011320)
chr01	irgsp1_rep	five_prime_UTR	756710	756901	.	-	.	Parent=Os01t0114000-00
chr01	irgsp1_rep	CDS	756221	756709	.	-	.	Parent=Os01t0114000-00
chr01	irgsp1_rep	mRNA	760695	760756	.	+	.	ID=Os01t0114050-00;Name=Os01t0114050-00;Locus_id=Os01g0114050;Note=Non-protein coding transcript.;Transcript_evidence=EU941912 (DDBJ);ORF_evidence=NONE
chr01	irgsp1_rep	exon	760695	760756	.	+	.	Parent=Os01t0114050-00
chr01	irgsp1_rep	mRNA	767181	769673	.	-	.	ID=Os01t0114100-01;Name=Os01t0114100-01;Locus_id=Os01g0114100;Note=Similar to Protein kinase RLK17.;Transcript_evidence=AK068451 (DDBJ, Best hit);ORF_evidence=Q9LL54 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0114100-01;NIAS_FLcDNA=J013152M16;PGFD=Os01t0114100-01
chr01	irgsp1_rep	five_prime_UTR	769616	769673	.	-	.	Parent=Os01t0114100-01
chr01	irgsp1_rep	CDS	768900	769615	.	-	.	Parent=Os01t0114100-01
chr01	irgsp1_rep	CDS	768599	768756	.	-	.	Parent=Os01t0114100-01
chr01	irgsp1_rep	CDS	767382	768487	.	-	.	Parent=Os01t0114100-01
chr01	irgsp1_rep	three_prime_UTR	767181	767381	.	-	.	Parent=Os01t0114100-01
chr01	irgsp1_rep	mRNA	767384	769651	.	+	.	ID=Os01t0114150-00;Name=Os01t0114150-00;Locus_id=Os01g0114150;Note=Non-protein coding transcript.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=NONE
chr01	irgsp1_rep	exon	767384	768561	.	+	.	Parent=Os01t0114150-00
chr01	irgsp1_rep	exon	768681	769651	.	+	.	Parent=Os01t0114150-00
chr01	irgsp1_rep	mRNA	770284	774374	.	-	.	ID=Os01t0114200-01;Name=Os01t0114200-01;Locus_id=Os01g0114200;Note=Conserved hypothetical protein.;Transcript_evidence=AK099453 (DDBJ, Best hit);ORF_evidence=NP_001172142.1 (RefSeq);KEGG=Os01t0114200-01;NIAS_FLcDNA=J013022K11;PGFD=Os01t0114200-01
chr01	irgsp1_rep	five_prime_UTR	774076	774374	.	-	.	Parent=Os01t0114200-01
chr01	irgsp1_rep	five_prime_UTR	773843	773980	.	-	.	Parent=Os01t0114200-01
chr01	irgsp1_rep	five_prime_UTR	770669	770692	.	-	.	Parent=Os01t0114200-01
chr01	irgsp1_rep	CDS	770390	770668	.	-	.	Parent=Os01t0114200-01
chr01	irgsp1_rep	three_prime_UTR	770284	770389	.	-	.	Parent=Os01t0114200-01
chr01	irgsp1_rep	mRNA	770332	773829	.	+	.	ID=Os01t0114300-01;Name=Os01t0114300-01;Locus_id=Os01g0114300;Note=Similar to Receptor-like protein kinase (Fragment).;Transcript_evidence=AK120121 (DDBJ, Best hit);ORF_evidence=O49206 (UniProt);NIAS_FLcDNA=J013025P07
chr01	irgsp1_rep	five_prime_UTR	770332	771993	.	+	.	Parent=Os01t0114300-01
chr01	irgsp1_rep	CDS	771994	772236	.	+	.	Parent=Os01t0114300-01
chr01	irgsp1_rep	three_prime_UTR	772237	772363	.	+	.	Parent=Os01t0114300-01
chr01	irgsp1_rep	three_prime_UTR	772470	773829	.	+	.	Parent=Os01t0114300-01
chr01	irgsp1_rep	mRNA	774727	775743	.	-	.	ID=Os01t0114400-00;Name=Os01t0114400-00;Locus_id=Os01g0114400;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK376323 (DDBJ);ORF_evidence=Q9LL56 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0114400-00;PGFD=Os01t0114400-00
chr01	irgsp1_rep	CDS	774727	775743	.	-	.	Parent=Os01t0114400-00
chr01	irgsp1_rep	mRNA	774848	779158	.	+	.	ID=Os01t0114402-00;Name=Os01t0114402-00;Locus_id=Os01g0114402;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	774848	774857	.	+	.	Parent=Os01t0114402-00
chr01	irgsp1_rep	CDS	774858	775175	.	+	.	Parent=Os01t0114402-00
chr01	irgsp1_rep	three_prime_UTR	775176	776169	.	+	.	Parent=Os01t0114402-00
chr01	irgsp1_rep	three_prime_UTR	778457	779158	.	+	.	Parent=Os01t0114402-00
chr01	irgsp1_rep	mRNA	782765	784932	.	-	.	ID=Os01t0114550-01;Name=Os01t0114550-01;Locus_id=Os01g0114550;Note=Non-protein coding transcript.;Transcript_evidence=AK242624 (DDBJ, Best hit);ORF_evidence=NONE;NIAS_FLcDNA=J090020C13
chr01	irgsp1_rep	exon	782765	784932	.	-	.	Parent=Os01t0114550-01
chr01	irgsp1_rep	mRNA	786373	788619	-0.619441	-	.	ID=Os01t0114600-00;Name=Os01t0114600-00;Locus_id=Os01g0114600;Note=Similar to Receptor-like protein kinase.;Transcript_evidence=ab initio prediction;ORF_evidence=Q9M575 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	787844	788619	-0.140999	-	0	Parent=Os01t0114600-00
chr01	irgsp1_rep	CDS	787572	787756	-3.31732	-	1	Parent=Os01t0114600-00
chr01	irgsp1_rep	CDS	786373	787499	-0.650279	-	2	Parent=Os01t0114600-00
chr01	irgsp1_rep	mRNA	786401	788484	.	+	.	ID=Os01t0114650-00;Name=Os01t0114650-00;Locus_id=Os01g0114650;Note=Non-protein coding transcript.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=NONE
chr01	irgsp1_rep	exon	786401	787797	.	+	.	Parent=Os01t0114650-00
chr01	irgsp1_rep	exon	787899	788484	.	+	.	Parent=Os01t0114650-00
chr01	irgsp1_rep	mRNA	789714	792435	.	+	.	ID=Os01t0114700-00;Name=Os01t0114700-00;Locus_id=Os01g0114700;Note=Similar to Receptor-like kinase.;Transcript_evidence=BT067108 (DDBJ);ORF_evidence=Q9LKY7 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Concanavalin A-like lectin/glucanase, subgroup (IPR013320),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	five_prime_UTR	789714	789768	.	+	.	Parent=Os01t0114700-00
chr01	irgsp1_rep	CDS	789769	790555	.	+	.	Parent=Os01t0114700-00
chr01	irgsp1_rep	CDS	791139	791162	.	+	.	Parent=Os01t0114700-00
chr01	irgsp1_rep	CDS	791339	792411	.	+	.	Parent=Os01t0114700-00
chr01	irgsp1_rep	three_prime_UTR	792412	792435	.	+	.	Parent=Os01t0114700-00
chr01	irgsp1_rep	mRNA	792455	796419	.	-	.	ID=Os01t0114800-01;Name=Os01t0114800-01;Locus_id=Os01g0114800;Note=Similar to H0215A08.3 protein.;Transcript_evidence=AK070789 (DDBJ, Best hit);ORF_evidence=Q01N39 (UniProt);NIAS_FLcDNA=J023064F16
chr01	irgsp1_rep	five_prime_UTR	796137	796419	.	-	.	Parent=Os01t0114800-01
chr01	irgsp1_rep	five_prime_UTR	795590	795720	.	-	.	Parent=Os01t0114800-01
chr01	irgsp1_rep	five_prime_UTR	793939	793984	.	-	.	Parent=Os01t0114800-01
chr01	irgsp1_rep	five_prime_UTR	793625	793750	.	-	.	Parent=Os01t0114800-01
chr01	irgsp1_rep	CDS	793596	793624	.	-	.	Parent=Os01t0114800-01
chr01	irgsp1_rep	CDS	793088	793511	.	-	.	Parent=Os01t0114800-01
chr01	irgsp1_rep	three_prime_UTR	792455	793087	.	-	.	Parent=Os01t0114800-01
chr01	irgsp1_rep	mRNA	794499	795413	-1.30408	+	.	ID=Os01t0114900-00;Name=Os01t0114900-00;Locus_id=Os01g0114900;Note=Similar to LRK14.;Transcript_evidence=ab initio prediction;ORF_evidence=Q9LL57 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0114900-00;PGFD=Os01t0114900-00;IDCGP=Os01t0114900-00
chr01	irgsp1_rep	CDS	794499	795413	-1.30408	+	0	Parent=Os01t0114900-00
chr01	irgsp1_rep	mRNA	804097	806932	.	-	.	ID=Os01t0115100-01;Name=Os01t0115100-01;Locus_id=Os01g0115100;Note=Hypothetical conserved gene.;Transcript_evidence=AK242515 (DDBJ, Best hit);ORF_evidence=B9EYW8 (UniProt);KEGG=Os01t0115100-01;NIAS_FLcDNA=J080312D15;PGFD=Os01t0115100-01
chr01	irgsp1_rep	five_prime_UTR	806723	806932	.	-	.	Parent=Os01t0115100-01
chr01	irgsp1_rep	five_prime_UTR	806488	806564	.	-	.	Parent=Os01t0115100-01
chr01	irgsp1_rep	five_prime_UTR	805938	806412	.	-	.	Parent=Os01t0115100-01
chr01	irgsp1_rep	CDS	805599	805937	.	-	.	Parent=Os01t0115100-01
chr01	irgsp1_rep	CDS	804752	804815	.	-	.	Parent=Os01t0115100-01
chr01	irgsp1_rep	CDS	804299	804333	.	-	.	Parent=Os01t0115100-01
chr01	irgsp1_rep	three_prime_UTR	804097	804298	.	-	.	Parent=Os01t0115100-01
chr01	irgsp1_rep	mRNA	808373	808859	-1.06512	+	.	ID=Os01t0115200-00;Name=Os01t0115200-00;Locus_id=Os01g0115200;Note=Similar to OSIGBa0140C02.7 protein.;Transcript_evidence=ab initio prediction;ORF_evidence=B7ETP8 (UniProt);InterPro=Amidase (IPR000120),Amidase signature domain (IPR023631);GO=Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884);KEGG=Os01t0115200-00
chr01	irgsp1_rep	CDS	808373	808516	-1.64808	+	0	Parent=Os01t0115200-00
chr01	irgsp1_rep	CDS	808533	808859	-1.4056	+	0	Parent=Os01t0115200-00
chr01	irgsp1_rep	mRNA	808174	810139	.	-	.	ID=Os01t0115300-01;Name=Os01t0115300-01;Locus_id=Os01g0115300;Note=Hypothetical gene.;Transcript_evidence=AK107581 (DDBJ, Best hit);ORF_evidence=GeneMark;KEGG=Os01t0115300-01;NIAS_FLcDNA=002-130-E03
chr01	irgsp1_rep	five_prime_UTR	809301	810139	.	-	.	Parent=Os01t0115300-01
chr01	irgsp1_rep	CDS	809267	809300	.	-	.	Parent=Os01t0115300-01
chr01	irgsp1_rep	CDS	808874	809109	.	-	.	Parent=Os01t0115300-01
chr01	irgsp1_rep	three_prime_UTR	808174	808873	.	-	.	Parent=Os01t0115300-01
chr01	irgsp1_rep	mRNA	839809	840828	.	-	.	ID=Os01t0115500-00;Name=Os01t0115500-00;Locus_id=Os01g0115500;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK369477 (DDBJ);ORF_evidence=Q9LL53 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0115500-00;PGFD=Os01t0115500-00
chr01	irgsp1_rep	CDS	839809	840828	.	-	.	Parent=Os01t0115500-00
chr01	irgsp1_rep	mRNA	839879	842743	.	+	.	ID=Os01t0115533-00;Name=Os01t0115533-00;Locus_id=Os01g0115533;Note=Non-protein coding transcript.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=NONE
chr01	irgsp1_rep	exon	839879	841146	.	+	.	Parent=Os01t0115533-00
chr01	irgsp1_rep	exon	841969	842743	.	+	.	Parent=Os01t0115533-00
chr01	irgsp1_rep	mRNA	842002	842757	-0.621583	-	.	ID=Os01t0115566-00;Name=Os01t0115566-00;Locus_id=Os01g0115566;Note=Similar to Receptor-like kinase.;Transcript_evidence=ab initio prediction;ORF_evidence=Q9LL54 (UniProt)
chr01	irgsp1_rep	CDS	842002	842757	-0.621583	-	0	Parent=Os01t0115566-00
chr01	irgsp1_rep	mRNA	843530	847399	.	+	.	ID=Os01t0115600-01;Name=Os01t0115600-01;Locus_id=Os01g0115600;Note=Similar to LRK14.;Transcript_evidence=AK121074 (DDBJ, Best hit);ORF_evidence=Q9LL55 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0115600-01;NIAS_FLcDNA=J023061O14;PGFD=Os01t0115600-01
chr01	irgsp1_rep	five_prime_UTR	843530	843542	.	+	.	Parent=Os01t0115600-01
chr01	irgsp1_rep	CDS	843543	844311	.	+	.	Parent=Os01t0115600-01
chr01	irgsp1_rep	CDS	845964	845987	.	+	.	Parent=Os01t0115600-01
chr01	irgsp1_rep	CDS	846202	847274	.	+	.	Parent=Os01t0115600-01
chr01	irgsp1_rep	three_prime_UTR	847275	847399	.	+	.	Parent=Os01t0115600-01
chr01	irgsp1_rep	mRNA	852249	854568	.	-	.	ID=Os01t0115700-00;Name=Os01t0115700-00;Locus_id=Os01g0115700;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK353778 (DDBJ);ORF_evidence=Q9LL52 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	853922	854568	.	-	.	Parent=Os01t0115700-00
chr01	irgsp1_rep	CDS	852249	853488	.	-	.	Parent=Os01t0115700-00
chr01	irgsp1_rep	mRNA	852275	854570	.	+	.	ID=Os01t0115725-00;Name=Os01t0115725-00;Locus_id=Os01g0115725;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	852275	853405	.	+	.	Parent=Os01t0115725-00
chr01	irgsp1_rep	five_prime_UTR	853580	854223	.	+	.	Parent=Os01t0115725-00
chr01	irgsp1_rep	CDS	854224	854514	.	+	.	Parent=Os01t0115725-00
chr01	irgsp1_rep	three_prime_UTR	854515	854570	.	+	.	Parent=Os01t0115725-00
chr01	irgsp1_rep	mRNA	857897	860583	.	-	.	ID=Os01t0115750-00;Name=Os01t0115750-00;Locus_id=Os01g0115750;Note=Similar to Receptor-like protein kinase.;Transcript_evidence=AK331027 (DDBJ);ORF_evidence=Q9M574 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	859802	860583	.	-	.	Parent=Os01t0115750-00
chr01	irgsp1_rep	CDS	857957	859211	.	-	.	Parent=Os01t0115750-00
chr01	irgsp1_rep	three_prime_UTR	857897	857956	.	-	.	Parent=Os01t0115750-00
chr01	irgsp1_rep	mRNA	857905	860521	.	+	.	ID=Os01t0115752-00;Name=Os01t0115752-00;Locus_id=Os01g0115752;Note=Non-protein coding transcript.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=NONE
chr01	irgsp1_rep	exon	857905	859100	.	+	.	Parent=Os01t0115752-00
chr01	irgsp1_rep	exon	859587	860521	.	+	.	Parent=Os01t0115752-00
chr01	irgsp1_rep	mRNA	862579	865249	.	-	.	ID=Os01t0115800-01;Name=Os01t0115800-01;Locus_id=Os01g0115800;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK120293 (DDBJ, Best hit);ORF_evidence=Q9SWV0 (UniProt);NIAS_FLcDNA=J013050K22
chr01	irgsp1_rep	five_prime_UTR	865209	865249	.	-	.	Parent=Os01t0115800-01
chr01	irgsp1_rep	CDS	864490	865208	.	-	.	Parent=Os01t0115800-01
chr01	irgsp1_rep	CDS	864217	864386	.	-	.	Parent=Os01t0115800-01
chr01	irgsp1_rep	CDS	864121	864131	.	-	.	Parent=Os01t0115800-01
chr01	irgsp1_rep	three_prime_UTR	862579	864120	.	-	.	Parent=Os01t0115800-01
chr01	irgsp1_rep	mRNA	865938	869298	.	+	.	ID=Os01t0115900-00;Name=Os01t0115900-00;Locus_id=Os01g0115900;Note=Similar to Receptor-like protein kinase.;Transcript_evidence=AK120121 (DDBJ, Secondary hit);ORF_evidence=Q9M576 (UniProt)
chr01	irgsp1_rep	five_prime_UTR	865938	865965	.	+	.	Parent=Os01t0115900-00
chr01	irgsp1_rep	CDS	865966	866763	.	+	.	Parent=Os01t0115900-00
chr01	irgsp1_rep	three_prime_UTR	866764	867883	.	+	.	Parent=Os01t0115900-00
chr01	irgsp1_rep	three_prime_UTR	867991	869175	.	+	.	Parent=Os01t0115900-00
chr01	irgsp1_rep	three_prime_UTR	869182	869298	.	+	.	Parent=Os01t0115900-00
chr01	irgsp1_rep	mRNA	863115	865183	.	+	.	ID=Os01t0115950-00;Name=Os01t0115950-00;Locus_id=Os01g0115950;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	863115	863815	.	+	.	Parent=Os01t0115950-00
chr01	irgsp1_rep	CDS	863816	864262	.	+	.	Parent=Os01t0115950-00
chr01	irgsp1_rep	three_prime_UTR	864263	864362	.	+	.	Parent=Os01t0115950-00
chr01	irgsp1_rep	three_prime_UTR	864425	865183	.	+	.	Parent=Os01t0115950-00
chr01	irgsp1_rep	mRNA	872458	874817	.	-	.	ID=Os01t0116000-00;Name=Os01t0116000-00;Locus_id=Os01g0116000;Note=Similar to Receptor-like protein kinase.;Transcript_evidence=AK364903 (DDBJ);ORF_evidence=Q9M577 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	874051	874817	.	-	.	Parent=Os01t0116000-00
chr01	irgsp1_rep	CDS	873799	873950	.	-	.	Parent=Os01t0116000-00
chr01	irgsp1_rep	CDS	872481	873616	.	-	.	Parent=Os01t0116000-00
chr01	irgsp1_rep	three_prime_UTR	872458	872480	.	-	.	Parent=Os01t0116000-00
chr01	irgsp1_rep	mRNA	865786	869533	.	-	.	ID=Os01t0116100-01;Name=Os01t0116100-01;Locus_id=Os01g0116100;Note=Conserved hypothetical protein.;Transcript_evidence=AK318568 (DDBJ, Best hit);ORF_evidence=NP_001172142.1 (RefSeq);KEGG=Os01t0116100-01;NIAS_FLcDNA=J080093F08;PGFD=Os01t0116100-01
chr01	irgsp1_rep	five_prime_UTR	869364	869533	.	-	.	Parent=Os01t0116100-01
chr01	irgsp1_rep	five_prime_UTR	866193	866216	.	-	.	Parent=Os01t0116100-01
chr01	irgsp1_rep	CDS	865917	866192	.	-	.	Parent=Os01t0116100-01
chr01	irgsp1_rep	three_prime_UTR	865786	865916	.	-	.	Parent=Os01t0116100-01
chr01	irgsp1_rep	mRNA	872509	874697	.	+	.	ID=Os01t0116101-00;Name=Os01t0116101-00;Locus_id=Os01g0116101;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	872509	873290	.	+	.	Parent=Os01t0116101-00
chr01	irgsp1_rep	CDS	873291	873671	.	+	.	Parent=Os01t0116101-00
chr01	irgsp1_rep	three_prime_UTR	873672	873762	.	+	.	Parent=Os01t0116101-00
chr01	irgsp1_rep	three_prime_UTR	873877	874697	.	+	.	Parent=Os01t0116101-00
chr01	irgsp1_rep	mRNA	911735	914246	.	-	.	ID=Os01t0116200-01;Name=Os01t0116200-01;Locus_id=Os01g0116200;Note=Protein kinase, core domain containing protein.;Transcript_evidence=AK074011 (DDBJ, Best hit);ORF_evidence=Q9SWV0 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0116200-01;NIAS_FLcDNA=J033074L11;PGFD=Os01t0116200-01
chr01	irgsp1_rep	five_prime_UTR	914220	914246	.	-	.	Parent=Os01t0116200-01
chr01	irgsp1_rep	CDS	913462	914219	.	-	.	Parent=Os01t0116200-01
chr01	irgsp1_rep	CDS	913112	913338	.	-	.	Parent=Os01t0116200-01
chr01	irgsp1_rep	CDS	911857	913004	.	-	.	Parent=Os01t0116200-01
chr01	irgsp1_rep	three_prime_UTR	911735	911856	.	-	.	Parent=Os01t0116200-01
chr01	irgsp1_rep	mRNA	911978	914143	.	+	.	ID=Os01t0116250-00;Name=Os01t0116250-00;Locus_id=Os01g0116250;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	911978	911987	.	+	.	Parent=Os01t0116250-00
chr01	irgsp1_rep	CDS	911988	912305	.	+	.	Parent=Os01t0116250-00
chr01	irgsp1_rep	three_prime_UTR	912306	913225	.	+	.	Parent=Os01t0116250-00
chr01	irgsp1_rep	three_prime_UTR	913416	914143	.	+	.	Parent=Os01t0116250-00
chr01	irgsp1_rep	mRNA	915605	917636	.	+	.	ID=Os01t0116300-01;Name=Os01t0116300-01;Locus_id=Os01g0116300;Note=Similar to Receptor-like kinase.;Transcript_evidence=AK241651 (DDBJ, Best hit);ORF_evidence=Q9LL57 (UniProt);KEGG=Os01t0116300-01;NIAS_FLcDNA=J065191A02;PGFD=Os01t0116300-01;IDCGP=Os01t0116300-01
chr01	irgsp1_rep	five_prime_UTR	915605	915638	.	+	.	Parent=Os01t0116300-01
chr01	irgsp1_rep	CDS	915639	916571	.	+	.	Parent=Os01t0116300-01
chr01	irgsp1_rep	three_prime_UTR	916572	917636	.	+	.	Parent=Os01t0116300-01
chr01	irgsp1_rep	mRNA	921078	923630	.	-	.	ID=Os01t0116400-01;Name=Os01t0116400-01;Locus_id=Os01g0116400;Note=Protein kinase, core domain containing protein.;Transcript_evidence=AK066041 (DDBJ, Best hit);ORF_evidence=B8ACX8 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0116400-01;NIAS_FLcDNA=J013046E24;PGFD=Os01t0116400-01
chr01	irgsp1_rep	five_prime_UTR	923583	923630	.	-	.	Parent=Os01t0116400-01
chr01	irgsp1_rep	CDS	922834	923582	.	-	.	Parent=Os01t0116400-01
chr01	irgsp1_rep	CDS	922519	922682	.	-	.	Parent=Os01t0116400-01
chr01	irgsp1_rep	CDS	921271	922391	.	-	.	Parent=Os01t0116400-01
chr01	irgsp1_rep	three_prime_UTR	921078	921270	.	-	.	Parent=Os01t0116400-01
chr01	irgsp1_rep	mRNA	929884	934458	.	-	.	ID=Os01t0116600-01;Name=Os01t0116600-01;Locus_id=Os01g0116600;Note=Protein synthesis factor, GTP-binding domain containing protein.;Transcript_evidence=AK073254 (DDBJ, Best hit);ORF_evidence=B9EZ78 (UniProt);InterPro=Protein synthesis factor, GTP-binding (IPR000795),Zinc finger, RanBP2-type (IPR001876),Translation elongation factor EFTu/EF1A, C-terminal (IPR004160),Translation elongation factor EFTu/EF1A, domain 2 (IPR004161),Translation elongation/initiation factor/Ribosomal, beta-barrel (IPR009000),Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (IPR009001);GO=Cellular Component: intracellular (GO:0005622),Molecular Function: GTPase activity (GO:0003924),Molecular Function: GTP binding (GO:0005525),Molecular Function: zinc ion binding (GO:0008270);NIAS_FLcDNA=J033022J22
chr01	irgsp1_rep	CDS	934269	934458	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	933304	933453	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	933069	933203	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	932547	932599	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	932268	932474	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	932047	932157	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	931461	931960	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	931038	931206	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	930534	930773	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	930328	930459	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	CDS	930107	930241	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	three_prime_UTR	929884	930106	.	-	.	Parent=Os01t0116600-01
chr01	irgsp1_rep	mRNA	929884	932368	.	-	.	ID=Os01t0116600-02;Name=Os01t0116600-02;Locus_id=Os01g0116600;Note=Similar to predicted protein.;Transcript_evidence=AK121811 (DDBJ, Best hit);ORF_evidence=Q259E7 (UniProt);InterPro=Protein synthesis factor, GTP-binding (IPR000795),Translation elongation factor EFTu/EF1A, C-terminal (IPR004160),Translation elongation factor EFTu/EF1A, domain 2 (IPR004161),Translation elongation/initiation factor/Ribosomal, beta-barrel (IPR009000),Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (IPR009001);GO=Molecular Function: GTPase activity (GO:0003924),Molecular Function: GTP binding (GO:0005525);KEGG=Os01t0116600-02;NIAS_FLcDNA=J033098B11;PGFD=Os01t0116600-02
chr01	irgsp1_rep	five_prime_UTR	932367	932368	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	CDS	932268	932366	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	CDS	932047	932157	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	CDS	931461	931960	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	CDS	931038	931206	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	CDS	930534	930773	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	CDS	930328	930459	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	CDS	930107	930241	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	three_prime_UTR	929884	930106	.	-	.	Parent=Os01t0116600-02
chr01	irgsp1_rep	mRNA	921296	923591	.	+	.	ID=Os01t0116650-00;Name=Os01t0116650-00;Locus_id=Os01g0116650;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	921296	921581	.	+	.	Parent=Os01t0116650-00
chr01	irgsp1_rep	CDS	921582	921857	.	+	.	Parent=Os01t0116650-00
chr01	irgsp1_rep	three_prime_UTR	921858	922742	.	+	.	Parent=Os01t0116650-00
chr01	irgsp1_rep	three_prime_UTR	922880	923591	.	+	.	Parent=Os01t0116650-00
chr01	irgsp1_rep	mRNA	935574	936704	-1.98506	-	.	ID=Os01t0116800-00;Name=Os01t0116800-00;Locus_id=Os01g0116800;Note=Similar to Receptor-like kinase.;Transcript_evidence=ab initio prediction;ORF_evidence=Q9LL58 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	935574	936704	-1.98506	-	0	Parent=Os01t0116800-00
chr01	irgsp1_rep	mRNA	924451	956639	.	+	.	ID=Os01t0116900-00;Name=Os01t0116900-00;Locus_id=Os01g0116900;Note=Protein kinase, catalytic domain domain containing protein.;Transcript_evidence=AK356501 (DDBJ);ORF_evidence=NP_001041839.2 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	924451	924840	.	+	.	Parent=Os01t0116900-00
chr01	irgsp1_rep	CDS	939350	939434	.	+	.	Parent=Os01t0116900-00
chr01	irgsp1_rep	CDS	955567	956639	.	+	.	Parent=Os01t0116900-00
chr01	irgsp1_rep	mRNA	935618	938250	.	+	.	ID=Os01t0116901-00;Name=Os01t0116901-00;Locus_id=Os01g0116901;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	935618	935656	.	+	.	Parent=Os01t0116901-00
chr01	irgsp1_rep	CDS	935657	936181	.	+	.	Parent=Os01t0116901-00
chr01	irgsp1_rep	three_prime_UTR	936182	936985	.	+	.	Parent=Os01t0116901-00
chr01	irgsp1_rep	three_prime_UTR	937593	938250	.	+	.	Parent=Os01t0116901-00
chr01	irgsp1_rep	mRNA	957907	960626	-0.802331	-	.	ID=Os01t0117000-00;Name=Os01t0117000-00;Locus_id=Os01g0117000;Note=Similar to Receptor-like kinase ARK1AS.;Transcript_evidence=ab initio prediction;ORF_evidence=Q9XGE8 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	959875	960626	-1.06902	-	0	Parent=Os01t0117000-00
chr01	irgsp1_rep	CDS	959587	959756	-2.03869	-	1	Parent=Os01t0117000-00
chr01	irgsp1_rep	CDS	958768	959486	-2.63476	-	2	Parent=Os01t0117000-00
chr01	irgsp1_rep	CDS	958408	958676	-2.11648	-	0	Parent=Os01t0117000-00
chr01	irgsp1_rep	CDS	957907	958219	-0.906125	-	1	Parent=Os01t0117000-00
chr01	irgsp1_rep	mRNA	957952	960545	.	+	.	ID=Os01t0117025-00;Name=Os01t0117025-00;Locus_id=Os01g0117025;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	957952	957983	.	+	.	Parent=Os01t0117025-00
chr01	irgsp1_rep	CDS	957984	958210	.	+	.	Parent=Os01t0117025-00
chr01	irgsp1_rep	CDS	958650	958680	.	+	.	Parent=Os01t0117025-00
chr01	irgsp1_rep	three_prime_UTR	958681	959571	.	+	.	Parent=Os01t0117025-00
chr01	irgsp1_rep	three_prime_UTR	959700	960545	.	+	.	Parent=Os01t0117025-00
chr01	irgsp1_rep	mRNA	961335	961973	.	-	.	ID=Os01t0117050-01;Name=Os01t0117050-01;Locus_id=Os01g0117050;Note=Non-protein coding transcript.;Transcript_evidence=AK242962 (DDBJ, Best hit);ORF_evidence=NONE;NIAS_FLcDNA=J090090J23
chr01	irgsp1_rep	exon	961335	961973	.	-	.	Parent=Os01t0117050-01
chr01	irgsp1_rep	mRNA	961799	965151	.	+	.	ID=Os01t0117100-00;Name=Os01t0117100-00;Locus_id=Os01g0117100;Note=Similar to Receptor kinase LRK10.;Transcript_evidence=AK356501 (DDBJ);ORF_evidence=Q84K89 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	five_prime_UTR	961799	962086	.	+	.	Parent=Os01t0117100-00
chr01	irgsp1_rep	five_prime_UTR	962505	962569	.	+	.	Parent=Os01t0117100-00
chr01	irgsp1_rep	five_prime_UTR	964038	964056	.	+	.	Parent=Os01t0117100-00
chr01	irgsp1_rep	CDS	964057	965151	.	+	.	Parent=Os01t0117100-00
chr01	irgsp1_rep	mRNA	969340	973327	.	-	.	ID=Os01t0117200-01;Name=Os01t0117200-01;Locus_id=Os01g0117200;Note=Similar to ARK protein (Fragment).;Transcript_evidence=AK120089 (DDBJ, Best hit);ORF_evidence=Q9ATQ4 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os01t0117200-01;NIAS_FLcDNA=J013020P18;PGFD=Os01t0117200-01
chr01	irgsp1_rep	five_prime_UTR	973306	973327	.	-	.	Parent=Os01t0117200-01
chr01	irgsp1_rep	CDS	972485	973305	.	-	.	Parent=Os01t0117200-01
chr01	irgsp1_rep	CDS	972191	972363	.	-	.	Parent=Os01t0117200-01
chr01	irgsp1_rep	CDS	969487	970664	.	-	.	Parent=Os01t0117200-01
chr01	irgsp1_rep	three_prime_UTR	969340	969486	.	-	.	Parent=Os01t0117200-01
chr01	irgsp1_rep	mRNA	969539	970666	.	+	.	ID=Os01t0117233-00;Name=Os01t0117233-00;Locus_id=Os01g0117233;Note=Non-protein coding transcript.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=NONE
chr01	irgsp1_rep	exon	969539	970666	.	+	.	Parent=Os01t0117233-00
chr01	irgsp1_rep	mRNA	976766	977218	-1.28219	+	.	ID=Os01t0117266-00;Name=Os01t0117266-00;Locus_id=Os01g0117266;Note=Conserved hypothetical protein.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001041850.1 (RefSeq)
chr01	irgsp1_rep	CDS	976766	977218	-1.28219	+	0	Parent=Os01t0117266-00
chr01	irgsp1_rep	mRNA	979238	980546	.	+	.	ID=Os01t0117300-00;Name=Os01t0117300-00;Locus_id=Os01g0117300;Note=Similar to Receptor kinase LRK10.;Transcript_evidence=AK356501 (DDBJ);ORF_evidence=Q84K89 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	979238	980431	.	+	.	Parent=Os01t0117300-00
chr01	irgsp1_rep	three_prime_UTR	980432	980546	.	+	.	Parent=Os01t0117300-00
chr01	irgsp1_rep	mRNA	984510	985133	-1.50271	-	.	ID=Os01t0117400-00;Name=Os01t0117400-00;Locus_id=Os01g0117400;Note=Similar to Receptor-like kinase.;Transcript_evidence=ab initio prediction;ORF_evidence=Q9LL58 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	CDS	984510	985133	-1.50271	-	0	Parent=Os01t0117400-00
chr01	irgsp1_rep	mRNA	984536	986741	.	+	.	ID=Os01t0117450-00;Name=Os01t0117450-00;Locus_id=Os01g0117450;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	984536	984586	.	+	.	Parent=Os01t0117450-00
chr01	irgsp1_rep	CDS	984587	984949	.	+	.	Parent=Os01t0117450-00
chr01	irgsp1_rep	three_prime_UTR	984950	985744	.	+	.	Parent=Os01t0117450-00
chr01	irgsp1_rep	three_prime_UTR	985866	986741	.	+	.	Parent=Os01t0117450-00
chr01	irgsp1_rep	mRNA	987676	990745	.	+	.	ID=Os01t0117500-00;Name=Os01t0117500-00;Locus_id=Os01g0117500;Note=Similar to Receptor kinase LRK10.;Transcript_evidence=AK368350 (DDBJ);ORF_evidence=Q84K89 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Concanavalin A-like lectin/glucanase, subgroup (IPR013320),Protein kinase, ATP binding site (IPR017441),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
chr01	irgsp1_rep	five_prime_UTR	987676	987999	.	+	.	Parent=Os01t0117500-00
chr01	irgsp1_rep	five_prime_UTR	988060	988104	.	+	.	Parent=Os01t0117500-00
chr01	irgsp1_rep	CDS	988105	988450	.	+	.	Parent=Os01t0117500-00
chr01	irgsp1_rep	CDS	989575	990647	.	+	.	Parent=Os01t0117500-00
chr01	irgsp1_rep	three_prime_UTR	990648	990745	.	+	.	Parent=Os01t0117500-00
chr01	irgsp1_rep	mRNA	994712	997262	.	-	.	ID=Os01t0117600-01;Name=Os01t0117600-01;Locus_id=Os01g0117600;Note=Protein kinase, catalytic domain domain containing protein.;Transcript_evidence=AK065867 (DDBJ, Best hit);ORF_evidence=B9EZ80 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);NIAS_FLcDNA=J013044O08
chr01	irgsp1_rep	CDS	996412	997262	.	-	.	Parent=Os01t0117600-01
chr01	irgsp1_rep	CDS	996153	996322	.	-	.	Parent=Os01t0117600-01
chr01	irgsp1_rep	CDS	994910	996048	.	-	.	Parent=Os01t0117600-01
chr01	irgsp1_rep	three_prime_UTR	994712	994909	.	-	.	Parent=Os01t0117600-01
chr01	irgsp1_rep	mRNA	994955	997150	.	+	.	ID=Os01t0117650-00;Name=Os01t0117650-00;Locus_id=Os01g0117650;Note=Hypothetical protein.;Transcript_evidence=tplb0030a05 (Wheat FLcDNA);ORF_evidence=longestORF
chr01	irgsp1_rep	five_prime_UTR	994955	994986	.	+	.	Parent=Os01t0117650-00
chr01	irgsp1_rep	CDS	994987	995349	.	+	.	Parent=Os01t0117650-00
chr01	irgsp1_rep	three_prime_UTR	995350	996144	.	+	.	Parent=Os01t0117650-00
chr01	irgsp1_rep	three_prime_UTR	996266	997150	.	+	.	Parent=Os01t0117650-00
chr02	irgsp1_rep	mRNA	392	2696	.	+	.	ID=Os02t0100050-00;Name=Os02t0100050-00;Locus_id=Os02g0100050;Note=Conserved hypothetical protein.;Transcript_evidence=AK108592 (DDBJ, Secondary hit);ORF_evidence=Q67IX7 (UniProt)
chr02	irgsp1_rep	five_prime_UTR	392	516	.	+	.	Parent=Os02t0100050-00
chr02	irgsp1_rep	five_prime_UTR	527	595	.	+	.	Parent=Os02t0100050-00
chr02	irgsp1_rep	five_prime_UTR	610	626	.	+	.	Parent=Os02t0100050-00
chr02	irgsp1_rep	CDS	627	800	.	+	.	Parent=Os02t0100050-00
chr02	irgsp1_rep	three_prime_UTR	801	2696	.	+	.	Parent=Os02t0100050-00
chr02	irgsp1_rep	mRNA	3634	8377	.	-	.	ID=Os02t0100100-01;Name=Os02t0100100-01;Locus_id=Os02g0100100;Note=Thioredoxin domain domain containing protein.;Transcript_evidence=AK071514 (DDBJ, Best hit);ORF_evidence=Q67IX6 (UniProt);InterPro=Thioredoxin (IPR005746),Disulphide isomerase (IPR005788),Protein disulphide isomerase (IPR005792),Thioredoxin-like fold (IPR012336),Thioredoxin domain (IPR013766),Thioredoxin, conserved site (IPR017937);GO=Biological Process: glycerol ether metabolic process (GO:0006662),Biological Process: cell redox homeostasis (GO:0045454),Cellular Component: endoplasmic reticulum (GO:0005783),Molecular Function: electron carrier activity (GO:0009055),Molecular Function: protein disulfide oxidoreductase activity (GO:0015035),Molecular Function: isomerase activity (GO:0016853);KEGG=Os02t0100100-01 (EC:5.3.4.1);NIAS_FLcDNA=J023095I04;Oryzabase=9284;CGSNL Gene Symbol=_;CGSNL Gene Name=_;CGSNL Gene Symbol Synonym(s)=PDIL1%3B4;CGSNL Gene Name Synonym(s)=PROTEIN DISULFIDE ISOMERASE-LIKE 1%3B4;PGFD=Os02t0100100-01;IDCGP=Os02t0100100-01
chr02	irgsp1_rep	five_prime_UTR	8256	8377	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	7753	8255	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	7538	7667	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	7262	7430	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	7045	7163	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	6873	6953	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	6619	6705	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	6419	6493	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	5884	5952	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	5728	5808	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	5514	5648	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	4861	4917	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	CDS	3864	4049	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	three_prime_UTR	3634	3863	.	-	.	Parent=Os02t0100100-01
chr02	irgsp1_rep	mRNA	8609	9927	.	+	.	ID=Os02t0100150-01;Name=Os02t0100150-01;Locus_id=Os02g0100150;Note=Hypothetical conserved gene.;Transcript_evidence=AK241037 (DDBJ, Best hit);ORF_evidence=NP_001056336.1 (RefSeq);KEGG=Os02t0100150-01;NIAS_FLcDNA=J065059D09
chr02	irgsp1_rep	five_prime_UTR	8609	8609	.	+	.	Parent=Os02t0100150-01
chr02	irgsp1_rep	CDS	8610	8777	.	+	.	Parent=Os02t0100150-01
chr02	irgsp1_rep	three_prime_UTR	8778	9927	.	+	.	Parent=Os02t0100150-01
chr02	irgsp1_rep	mRNA	9298	13896	.	-	.	ID=Os02t0100200-01;Name=Os02t0100200-01;Locus_id=Os02g0100200;Note=Steroid nuclear receptor, ligand-binding domain containing protein.;Transcript_evidence=AK121311 (DDBJ, Best hit);ORF_evidence=B8AGU3 (UniProt);InterPro=Enhancer of polycomb-like, N-terminal (IPR019542);KEGG=Os02t0100200-01;NIAS_FLcDNA=J023112F22;PGFD=Os02t0100200-01;IDCGP=Os02t0100200-01
chr02	irgsp1_rep	five_prime_UTR	13625	13896	.	-	.	Parent=Os02t0100200-01
chr02	irgsp1_rep	CDS	12830	13624	.	-	.	Parent=Os02t0100200-01
chr02	irgsp1_rep	CDS	11328	12749	.	-	.	Parent=Os02t0100200-01
chr02	irgsp1_rep	CDS	11085	11196	.	-	.	Parent=Os02t0100200-01
chr02	irgsp1_rep	CDS	9542	9762	.	-	.	Parent=Os02t0100200-01
chr02	irgsp1_rep	three_prime_UTR	9298	9541	.	-	.	Parent=Os02t0100200-01
chr02	irgsp1_rep	mRNA	12563	13520	.	+	.	ID=Os02t0100250-00;Name=Os02t0100250-00;Locus_id=Os02g0100250;Note=Hypothetical protein.;Transcript_evidence=BT083581 (DDBJ);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	12563	12736	.	+	.	Parent=Os02t0100250-00
chr02	irgsp1_rep	five_prime_UTR	12814	13078	.	+	.	Parent=Os02t0100250-00
chr02	irgsp1_rep	CDS	13079	13520	.	+	.	Parent=Os02t0100250-00
chr02	irgsp1_rep	mRNA	14095	18477	.	+	.	ID=Os02t0100300-01;Name=Os02t0100300-01;Locus_id=Os02g0100300;Note=Similar to HSP associated protein like.;Transcript_evidence=AK102264 (DDBJ, Best hit);ORF_evidence=NP_001150109.1 (RefSeq);InterPro=Heat shock chaperonin-binding (IPR006636),Tetratricopeptide-like helical (IPR011990),Tetratricopeptide repeat-containing (IPR013026),Tetratricopeptide repeat (IPR019734);GO=Molecular Function: binding (GO:0005488),Molecular Function: protein binding (GO:0005515);KEGG=Os02t0100300-01;NIAS_FLcDNA=J033088M02;PGFD=Os02t0100300-01
chr02	irgsp1_rep	five_prime_UTR	14095	14147	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	14148	14312	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	14379	14549	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	14620	14707	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	14807	14887	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	14980	15044	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	15357	15497	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	15578	15694	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	15995	16237	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	16326	16383	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	CDS	18127	18224	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	three_prime_UTR	18225	18477	.	+	.	Parent=Os02t0100300-01
chr02	irgsp1_rep	mRNA	14146	18232	.	-	.	ID=Os02t0100333-00;Name=Os02t0100333-00;Locus_id=Os02g0100333;Note=Hypothetical gene.;Transcript_evidence=BT018368 (DDBJ);ORF_evidence=longestORF;KEGG=Os02t0100333-00
chr02	irgsp1_rep	five_prime_UTR	18231	18232	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	CDS	18135	18230	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	CDS	16324	16388	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	CDS	16000	16231	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	three_prime_UTR	15993	15999	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	three_prime_UTR	15562	15697	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	three_prime_UTR	15363	15483	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	three_prime_UTR	14978	15052	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	three_prime_UTR	14813	14885	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	three_prime_UTR	14605	14712	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	three_prime_UTR	14397	14538	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	three_prime_UTR	14146	14323	.	-	.	Parent=Os02t0100333-00
chr02	irgsp1_rep	mRNA	33032	33966	.	+	.	ID=Os02t0100600-01;Name=Os02t0100600-01;Locus_id=Os02g0100600;Note=Harpin-induced 1 domain containing protein.;Transcript_evidence=AK062483 (DDBJ, Best hit);ORF_evidence=A2WZQ6 (UniProt);InterPro=Late embryogenesis abundant protein, LEA-14 (IPR004864);KEGG=Os02t0100600-01;NIAS_FLcDNA=001-103-G07;PGFD=Os02t0100600-01;IDCGP=Os02t0100600-01
chr02	irgsp1_rep	five_prime_UTR	33032	33107	.	+	.	Parent=Os02t0100600-01
chr02	irgsp1_rep	CDS	33108	33752	.	+	.	Parent=Os02t0100600-01
chr02	irgsp1_rep	three_prime_UTR	33753	33966	.	+	.	Parent=Os02t0100600-01
chr02	irgsp1_rep	mRNA	34262	40938	.	+	.	ID=Os02t0100700-01;Name=Os02t0100700-01;Locus_id=Os02g0100700;Note=FG-GAP repeat containing protein.;Transcript_evidence=AK068943 (DDBJ, Best hit);ORF_evidence=XP_002876065.1 (RefSeq);InterPro=Quinonprotein alcohol dehydrogenase-like (IPR011047);KEGG=Os02t0100700-01;NIAS_FLcDNA=J013170D03;PGFD=Os02t0100700-01
chr02	irgsp1_rep	five_prime_UTR	34262	34435	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	34436	34498	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	34578	35120	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	35566	35643	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	35823	35915	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	36086	36181	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	36709	36762	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	36856	37059	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	38577	38708	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	39042	39107	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	39885	40184	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	CDS	40332	40808	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	three_prime_UTR	40809	40938	.	+	.	Parent=Os02t0100700-01
chr02	irgsp1_rep	mRNA	34575	37640	.	+	.	ID=Os02t0100700-02;Name=Os02t0100700-02;Locus_id=Os02g0100700;Note=Similar to predicted protein.;Transcript_evidence=AK070106 (DDBJ, Best hit);ORF_evidence=XP_002876065.1 (RefSeq);InterPro=Quinonprotein alcohol dehydrogenase-like (IPR011047);KEGG=Os02t0100700-02;NIAS_FLcDNA=J023044K08;PGFD=Os02t0100700-02
chr02	irgsp1_rep	CDS	34575	35120	.	+	.	Parent=Os02t0100700-02
chr02	irgsp1_rep	CDS	35566	35643	.	+	.	Parent=Os02t0100700-02
chr02	irgsp1_rep	CDS	35823	35915	.	+	.	Parent=Os02t0100700-02
chr02	irgsp1_rep	CDS	36086	36181	.	+	.	Parent=Os02t0100700-02
chr02	irgsp1_rep	CDS	36709	36762	.	+	.	Parent=Os02t0100700-02
chr02	irgsp1_rep	CDS	36856	37065	.	+	.	Parent=Os02t0100700-02
chr02	irgsp1_rep	three_prime_UTR	37066	37640	.	+	.	Parent=Os02t0100700-02
chr02	irgsp1_rep	mRNA	42347	43012	.	-	.	ID=Os02t0100800-01;Name=Os02t0100800-01;Locus_id=Os02g0100800;Note=Conserved hypothetical protein.;Transcript_evidence=AK062555 (DDBJ, Best hit);ORF_evidence=B9F1N0 (UniProt);NIAS_FLcDNA=001-104-H07
chr02	irgsp1_rep	CDS	42752	43012	.	-	.	Parent=Os02t0100800-01
chr02	irgsp1_rep	three_prime_UTR	42347	42751	.	-	.	Parent=Os02t0100800-01
chr02	irgsp1_rep	mRNA	50308	55886	.	-	.	ID=Os02t0101000-01;Name=Os02t0101000-01;Locus_id=Os02g0101000;Note=Amino acid transporter, transmembrane domain containing protein.;Transcript_evidence=AK074023 (DDBJ, Best hit);ORF_evidence=NP_001150669.1 (RefSeq);InterPro=Amino acid transporter, transmembrane (IPR013057);KEGG=Os02t0101000-01;NIAS_FLcDNA=J033075N18;PGFD=Os02t0101000-01
chr02	irgsp1_rep	five_prime_UTR	55762	55886	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	five_prime_UTR	55627	55675	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	55397	55626	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	54804	55147	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	53585	53799	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	53452	53475	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	52780	52960	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	52435	52654	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	52205	52340	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	51606	51629	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	51048	51186	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	50918	50961	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	50767	50829	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	CDS	50576	50671	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	three_prime_UTR	50308	50575	.	-	.	Parent=Os02t0101000-01
chr02	irgsp1_rep	mRNA	50407	55683	.	-	.	ID=Os02t0101000-02;Name=Os02t0101000-02;Locus_id=Os02g0101000;Note=Similar to amino acid permease.;Transcript_evidence=AK061115 (DDBJ, Best hit);ORF_evidence=Q25AF7 (UniProt);KEGG=Os02t0101000-02;NIAS_FLcDNA=006-207-E03
chr02	irgsp1_rep	five_prime_UTR	55627	55683	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	CDS	55397	55626	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	CDS	54804	55147	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	CDS	53760	53799	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	CDS	51048	51074	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	CDS	50918	50961	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	CDS	50789	50829	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	three_prime_UTR	50767	50788	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	three_prime_UTR	50407	50671	.	-	.	Parent=Os02t0101000-02
chr02	irgsp1_rep	mRNA	59323	64707	.	+	.	ID=Os02t0101100-01;Name=Os02t0101100-01;Locus_id=Os02g0101100;Note=Initiation factor 3 family protein.;Transcript_evidence=AK068038 (DDBJ, Best hit);ORF_evidence=B8AGU7 (UniProt);InterPro=Translation initiation factor 3 (IPR001288),Translation initiation factor 3, N-terminal (IPR019814),Translation initiation factor 3, C-terminal (IPR019815);GO=Biological Process: translational initiation (GO:0006413),Molecular Function: translation initiation factor activity (GO:0003743);KEGG=Os02t0101100-01;NIAS_FLcDNA=J013129P11;PGFD=Os02t0101100-01
chr02	irgsp1_rep	five_prime_UTR	59323	59370	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	CDS	59371	59523	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	CDS	59632	59725	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	CDS	59797	59864	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	CDS	60145	60243	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	CDS	60538	60594	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	CDS	60943	61011	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	CDS	63161	63229	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	CDS	63372	64322	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	three_prime_UTR	64323	64707	.	+	.	Parent=Os02t0101100-01
chr02	irgsp1_rep	mRNA	73183	73864	.	-	.	ID=Os02t0101300-01;Name=Os02t0101300-01;Locus_id=Os02g0101300;Note=Similar to OSIGBa0159F11.8 protein.;Transcript_evidence=AK105715 (DDBJ, Best hit);ORF_evidence=Q01IQ6 (UniProt);NIAS_FLcDNA=001-201-F03
chr02	irgsp1_rep	five_prime_UTR	73420	73864	.	-	.	Parent=Os02t0101300-01
chr02	irgsp1_rep	CDS	73183	73419	.	-	.	Parent=Os02t0101300-01
chr02	irgsp1_rep	mRNA	78461	79533	.	+	.	ID=Os02t0101400-01;Name=Os02t0101400-01;Locus_id=Os02g0101400;Note=Lipase, GDSL domain containing protein.;Transcript_evidence=AK067036 (DDBJ, Best hit);ORF_evidence=B6T2M4 (UniProt);InterPro=Lipase, GDSL (IPR001087);GO=Biological Process: lipid metabolic process (GO:0006629),Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);KEGG=Os02t0101400-01;NIAS_FLcDNA=J013092C19;PGFD=Os02t0101400-01;IDCGP=Os02t0101400-01
chr02	irgsp1_rep	five_prime_UTR	78461	78462	.	+	.	Parent=Os02t0101400-01
chr02	irgsp1_rep	CDS	78463	78487	.	+	.	Parent=Os02t0101400-01
chr02	irgsp1_rep	CDS	78594	79417	.	+	.	Parent=Os02t0101400-01
chr02	irgsp1_rep	three_prime_UTR	79418	79533	.	+	.	Parent=Os02t0101400-01
chr02	irgsp1_rep	mRNA	79729	82952	.	-	.	ID=Os02t0101500-01;Name=Os02t0101500-01;Locus_id=Os02g0101500;Note=Similar to NADH-dependent hydroxypyruvate reductase (EC 1.1.1.29) (Fragment).;Transcript_evidence=AK067642 (DDBJ, Best hit);ORF_evidence=Q93XV7 (UniProt);InterPro=D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (IPR006139),D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (IPR006140),NAD(P)-binding domain (IPR016040);GO=Biological Process: metabolic process (GO:0008152),Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: nucleotide binding (GO:0000166),Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616),Molecular Function: cofactor binding (GO:0048037),Molecular Function: NAD binding (GO:0051287);KEGG=Os02t0101500-01 (EC:1.1.1.29);NIAS_FLcDNA=J013108J23;PGFD=Os02t0101500-01
chr02	irgsp1_rep	five_prime_UTR	82805	82952	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	82682	82804	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	82509	82592	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	82300	82440	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	82096	82217	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	81923	82004	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	81731	81803	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	81213	81304	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	81027	81101	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	80726	80911	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	80480	80524	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	80194	80308	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	CDS	80082	80104	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	three_prime_UTR	79729	80081	.	-	.	Parent=Os02t0101500-01
chr02	irgsp1_rep	mRNA	78483	82880	.	-	.	ID=Os02t0101500-02;Name=Os02t0101500-02;Locus_id=Os02g0101500;Note=Similar to NADH-dependent hydroxypyruvate reductase (EC 1.1.1.29) (Fragment).;Transcript_evidence=AK072105 (DDBJ, Best hit);ORF_evidence=Q93XV7 (UniProt);InterPro=D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (IPR006139),D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (IPR006140),NAD(P)-binding domain (IPR016040);GO=Biological Process: metabolic process (GO:0008152),Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: nucleotide binding (GO:0000166),Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616),Molecular Function: cofactor binding (GO:0048037),Molecular Function: NAD binding (GO:0051287);KEGG=Os02t0101500-02 (EC:1.1.1.29);NIAS_FLcDNA=J013119J12;PGFD=Os02t0101500-02
chr02	irgsp1_rep	five_prime_UTR	82805	82880	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	82682	82804	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	82509	82592	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	82300	82440	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	82096	82217	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	81923	82004	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	81731	81803	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	81213	81304	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	81027	81101	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	80726	80911	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	80480	80524	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	80194	80308	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	CDS	80082	80104	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	three_prime_UTR	78483	80081	.	-	.	Parent=Os02t0101500-02
chr02	irgsp1_rep	mRNA	83413	85637	.	-	.	ID=Os02t0101600-00;Name=Os02t0101600-00;Locus_id=Os02g0101600;Note=Similar to SKP1-like protein 1A.;Transcript_evidence=AK248186 (DDBJ);ORF_evidence=B6T1N1 (UniProt);InterPro=SKP1 component (IPR001232),BTB/POZ fold (IPR011333),SKP1 component, POZ (IPR016073);GO=Biological Process: ubiquitin-dependent protein catabolic process (GO:0006511)
chr02	irgsp1_rep	CDS	85336	85637	.	-	.	Parent=Os02t0101600-00
chr02	irgsp1_rep	CDS	85214	85263	.	-	.	Parent=Os02t0101600-00
chr02	irgsp1_rep	CDS	83499	83632	.	-	.	Parent=Os02t0101600-00
chr02	irgsp1_rep	three_prime_UTR	83413	83498	.	-	.	Parent=Os02t0101600-00
chr02	irgsp1_rep	mRNA	86724	90020	.	-	.	ID=Os02t0101700-01;Name=Os02t0101700-01;Locus_id=Os02g0101700;Note=Similar to KAK (KAKTUS)%3B ubiquitin-protein ligase.;Transcript_evidence=AK105706 (DDBJ, Best hit);ORF_evidence=NP_849567.2 (RefSeq);InterPro=HECT (IPR000569);GO=Biological Process: protein modification process (GO:0006464),Cellular Component: intracellular (GO:0005622),Molecular Function: acid-amino acid ligase activity (GO:0016881);NIAS_FLcDNA=001-201-E03
chr02	irgsp1_rep	CDS	88665	90020	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	CDS	88338	88568	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	CDS	88133	88237	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	CDS	87962	88042	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	CDS	87801	87869	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	CDS	87593	87721	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	CDS	87376	87495	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	CDS	87215	87280	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	three_prime_UTR	87064	87214	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	three_prime_UTR	86724	86976	.	-	.	Parent=Os02t0101700-01
chr02	irgsp1_rep	mRNA	89109	89819	.	-	.	ID=Os02t0101700-02;Name=Os02t0101700-02;Locus_id=Os02g0101700;Note=Similar to predicted protein.;Transcript_evidence=AK072570 (DDBJ, Best hit);ORF_evidence=NP_195572.2 (RefSeq);KEGG=Os02t0101700-02 (EC:6.3.2.19);NIAS_FLcDNA=J023126M20;PGFD=Os02t0101700-02;IDCGP=Os02t0101700-02
chr02	irgsp1_rep	CDS	89109	89819	.	-	.	Parent=Os02t0101700-02
chr02	irgsp1_rep	mRNA	91535	93712	.	+	.	ID=Os02t0101750-00;Name=Os02t0101750-00;Locus_id=Os02g0101750;Note=Hypothetical gene.;Transcript_evidence=AM750004 (DDBJ);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	91535	92163	.	+	.	Parent=Os02t0101750-00
chr02	irgsp1_rep	five_prime_UTR	92406	92564	.	+	.	Parent=Os02t0101750-00
chr02	irgsp1_rep	five_prime_UTR	92661	92931	.	+	.	Parent=Os02t0101750-00
chr02	irgsp1_rep	five_prime_UTR	93168	93357	.	+	.	Parent=Os02t0101750-00
chr02	irgsp1_rep	five_prime_UTR	93434	93488	.	+	.	Parent=Os02t0101750-00
chr02	irgsp1_rep	CDS	93489	93712	.	+	.	Parent=Os02t0101750-00
chr02	irgsp1_rep	mRNA	98001	107811	.	-	.	ID=Os02t0101800-01;Name=Os02t0101800-01;Locus_id=Os02g0101800;Note=Kinesin, motor domain domain containing protein.;Transcript_evidence=AK102833 (DDBJ, Best hit);ORF_evidence=B9F1N7 (UniProt);InterPro=Kinesin, motor domain (IPR001752);GO=Biological Process: microtubule-based movement (GO:0007018),Molecular Function: microtubule motor activity (GO:0003777),Molecular Function: ATP binding (GO:0005524);NIAS_FLcDNA=J033109J12
chr02	irgsp1_rep	CDS	107434	107811	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	107138	107340	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	106844	106964	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	106497	106591	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	106144	106279	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	105945	106010	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	105740	105802	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	105182	105232	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	104497	104579	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	103399	103498	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	102993	103047	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	102636	102757	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	101915	102151	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	101226	101301	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	101064	101143	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	100853	100918	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	100541	100655	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	100169	100315	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	100008	100093	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	99363	99432	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	99139	99230	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	98830	98921	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	98635	98707	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	CDS	98311	98412	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	three_prime_UTR	98001	98310	.	-	.	Parent=Os02t0101800-01
chr02	irgsp1_rep	mRNA	110806	112358	.	+	.	ID=Os02t0101900-01;Name=Os02t0101900-01;Locus_id=Os02g0101900;Note=Conserved hypothetical protein.;Transcript_evidence=AK106664 (DDBJ, Best hit);ORF_evidence=A3A255 (UniProt);NIAS_FLcDNA=002-113-H05
chr02	irgsp1_rep	five_prime_UTR	110806	110807	.	+	.	Parent=Os02t0101900-01
chr02	irgsp1_rep	CDS	110808	111023	.	+	.	Parent=Os02t0101900-01
chr02	irgsp1_rep	three_prime_UTR	111024	111768	.	+	.	Parent=Os02t0101900-01
chr02	irgsp1_rep	three_prime_UTR	111847	112358	.	+	.	Parent=Os02t0101900-01
chr02	irgsp1_rep	mRNA	112766	115204	.	-	.	ID=Os02t0102000-00;Name=Os02t0102000-00;Locus_id=Os02g0102000;Note=Similar to OSIGBa0134P10.4 protein.;Transcript_evidence=BT061316 (DDBJ);ORF_evidence=Q01IT2 (UniProt);InterPro=Glutaredoxin (IPR002109),Thioredoxin-like fold (IPR012336);GO=Biological Process: cell redox homeostasis (GO:0045454),Molecular Function: electron carrier activity (GO:0009055),Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
chr02	irgsp1_rep	CDS	114777	115204	.	-	.	Parent=Os02t0102000-00
chr02	irgsp1_rep	CDS	112766	113306	.	-	.	Parent=Os02t0102000-00
chr02	irgsp1_rep	mRNA	119391	121684	.	+	.	ID=Os02t0102200-01;Name=Os02t0102200-01;Locus_id=Os02g0102200;Note=Similar to Transmembrane amino acid transporter protein.;Transcript_evidence=AK060685 (DDBJ, Best hit);ORF_evidence=Q9ARG2 (UniProt);InterPro=Amino acid transporter, transmembrane (IPR013057);KEGG=Os02t0102200-01;NIAS_FLcDNA=001-029-G03;PGFD=Os02t0102200-01
chr02	irgsp1_rep	five_prime_UTR	119391	119441	.	+	.	Parent=Os02t0102200-01
chr02	irgsp1_rep	five_prime_UTR	119629	119679	.	+	.	Parent=Os02t0102200-01
chr02	irgsp1_rep	CDS	119680	119733	.	+	.	Parent=Os02t0102200-01
chr02	irgsp1_rep	CDS	119842	120238	.	+	.	Parent=Os02t0102200-01
chr02	irgsp1_rep	CDS	120331	120424	.	+	.	Parent=Os02t0102200-01
chr02	irgsp1_rep	CDS	120518	121529	.	+	.	Parent=Os02t0102200-01
chr02	irgsp1_rep	three_prime_UTR	121530	121684	.	+	.	Parent=Os02t0102200-01
chr02	irgsp1_rep	mRNA	119975	121517	.	-	.	ID=Os02t0102250-00;Name=Os02t0102250-00;Locus_id=Os02g0102250;Note=Hypothetical protein.;Transcript_evidence=tplb0036o08 (Wheat FLcDNA);ORF_evidence=longestORF
chr02	irgsp1_rep	CDS	120516	121517	.	-	.	Parent=Os02t0102250-00
chr02	irgsp1_rep	CDS	120330	120422	.	-	.	Parent=Os02t0102250-00
chr02	irgsp1_rep	CDS	120052	120237	.	-	.	Parent=Os02t0102250-00
chr02	irgsp1_rep	three_prime_UTR	119975	120051	.	-	.	Parent=Os02t0102250-00
chr02	irgsp1_rep	mRNA	124645	127131	.	+	.	ID=Os02t0102300-01;Name=Os02t0102300-01;Locus_id=Os02g0102300;Note=Similar to Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese) (Senescence- associated protein) (Sulfurtransferase protein 16) (AtStr16).;Transcript_evidence=AK067143 (DDBJ, Best hit);ORF_evidence=NP_001152690.1 (RefSeq);InterPro=Rhodanese-like (IPR001763);KEGG=Os02t0102300-01 (EC:2.8.1.1);NIAS_FLcDNA=J013095M22;PGFD=Os02t0102300-01;IDCGP=Os02t0102300-01
chr02	irgsp1_rep	five_prime_UTR	124645	124870	.	+	.	Parent=Os02t0102300-01
chr02	irgsp1_rep	CDS	124871	124893	.	+	.	Parent=Os02t0102300-01
chr02	irgsp1_rep	CDS	125030	125128	.	+	.	Parent=Os02t0102300-01
chr02	irgsp1_rep	CDS	125379	125456	.	+	.	Parent=Os02t0102300-01
chr02	irgsp1_rep	CDS	125854	125920	.	+	.	Parent=Os02t0102300-01
chr02	irgsp1_rep	CDS	126038	126091	.	+	.	Parent=Os02t0102300-01
chr02	irgsp1_rep	CDS	126816	126908	.	+	.	Parent=Os02t0102300-01
chr02	irgsp1_rep	three_prime_UTR	126909	127131	.	+	.	Parent=Os02t0102300-01
chr02	irgsp1_rep	mRNA	126773	130152	.	-	.	ID=Os02t0102400-01;Name=Os02t0102400-01;Locus_id=Os02g0102400;Note=Ribosomal protein S5 family protein.;Transcript_evidence=AK288693 (DDBJ, Best hit);ORF_evidence=B6SVP3 (UniProt);InterPro=Ribosomal protein S5 (IPR000851),Ribosomal protein S5, C-terminal (IPR005324),Ribosomal protein S5, N-terminal (IPR013810),Double-stranded RNA-binding-like (IPR014720),Ribosomal protein S5 domain 2-type fold, subgroup (IPR014721),Ribosomal protein S5 domain 2-type fold (IPR020568);GO=Biological Process: translation (GO:0006412),Cellular Component: intracellular (GO:0005622),Cellular Component: ribosome (GO:0005840),Molecular Function: RNA binding (GO:0003723),Molecular Function: structural constituent of ribosome (GO:0003735);KEGG=Os02t0102400-01;NIAS_FLcDNA=J090060M06;PGFD=Os02t0102400-01
chr02	irgsp1_rep	five_prime_UTR	130119	130152	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	CDS	129623	130118	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	CDS	129018	129544	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	CDS	128849	128899	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	CDS	128649	128756	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	CDS	128099	128194	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	CDS	127903	128004	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	CDS	127760	127819	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	CDS	127572	127637	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	three_prime_UTR	126773	127571	.	-	.	Parent=Os02t0102400-01
chr02	irgsp1_rep	mRNA	127079	130126	.	-	.	ID=Os02t0102400-02;Name=Os02t0102400-02;Locus_id=Os02g0102400;Note=Ribosomal protein S5 family protein.;Transcript_evidence=AK122073 (DDBJ, Best hit);ORF_evidence=B6SVP3 (UniProt);InterPro=Ribosomal protein S5 (IPR000851),Ribosomal protein S5, C-terminal (IPR005324),Ribosomal protein S5, N-terminal (IPR013810),Double-stranded RNA-binding-like (IPR014720),Ribosomal protein S5 domain 2-type fold, subgroup (IPR014721),Ribosomal protein S5 domain 2-type fold (IPR020568);GO=Biological Process: translation (GO:0006412),Cellular Component: intracellular (GO:0005622),Cellular Component: ribosome (GO:0005840),Molecular Function: RNA binding (GO:0003723),Molecular Function: structural constituent of ribosome (GO:0003735);KEGG=Os02t0102400-02;NIAS_FLcDNA=J033117P11;PGFD=Os02t0102400-02
chr02	irgsp1_rep	five_prime_UTR	130119	130126	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	CDS	129623	130118	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	CDS	129018	129544	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	CDS	128849	128899	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	CDS	128649	128756	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	CDS	128099	128194	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	CDS	127903	128004	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	CDS	127760	127819	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	CDS	127572	127637	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	three_prime_UTR	127079	127571	.	-	.	Parent=Os02t0102400-02
chr02	irgsp1_rep	mRNA	127169	127967	.	-	.	ID=Os02t0102400-03;Name=Os02t0102400-03;Locus_id=Os02g0102400;Note=Ribosomal protein S5 family protein.;Transcript_evidence=AK059054 (DDBJ, Best hit);ORF_evidence=B6SVP3 (UniProt);InterPro=Ribosomal protein S5 (IPR000851),Ribosomal protein S5, C-terminal (IPR005324),Ribosomal protein S5 domain 2-type fold, subgroup (IPR014721),Ribosomal protein S5 domain 2-type fold (IPR020568);GO=Biological Process: translation (GO:0006412),Cellular Component: intracellular (GO:0005622),Cellular Component: ribosome (GO:0005840),Molecular Function: structural constituent of ribosome (GO:0003735);KEGG=Os02t0102400-03;NIAS_FLcDNA=001-021-F01;PGFD=Os02t0102400-03
chr02	irgsp1_rep	five_prime_UTR	127966	127967	.	-	.	Parent=Os02t0102400-03
chr02	irgsp1_rep	CDS	127903	127965	.	-	.	Parent=Os02t0102400-03
chr02	irgsp1_rep	CDS	127760	127819	.	-	.	Parent=Os02t0102400-03
chr02	irgsp1_rep	CDS	127572	127637	.	-	.	Parent=Os02t0102400-03
chr02	irgsp1_rep	three_prime_UTR	127169	127571	.	-	.	Parent=Os02t0102400-03
chr02	irgsp1_rep	mRNA	132984	135144	.	+	.	ID=Os02t0102600-01;Name=Os02t0102600-01;Locus_id=Os02g0102600;Note=Ankyrin repeat containing protein.;Transcript_evidence=AK103103 (DDBJ, Best hit),AK060523 (DDBJ, Best hit);ORF_evidence=B4FRA5 (UniProt);InterPro=Ankyrin repeat (IPR002110),Ankyrin repeat-containing domain (IPR020683);GO=Molecular Function: protein binding (GO:0005515);NIAS_FLcDNA=J033118O11,001-020-E05;PGFD=Os02t0102600-01;IDCGP=Os02t0102600-01
chr02	irgsp1_rep	five_prime_UTR	132984	133472	.	+	.	Parent=Os02t0102600-01
chr02	irgsp1_rep	CDS	133473	133589	.	+	.	Parent=Os02t0102600-01
chr02	irgsp1_rep	CDS	133936	134107	.	+	.	Parent=Os02t0102600-01
chr02	irgsp1_rep	CDS	134662	134873	.	+	.	Parent=Os02t0102600-01
chr02	irgsp1_rep	three_prime_UTR	134874	135144	.	+	.	Parent=Os02t0102600-01
chr02	irgsp1_rep	mRNA	135305	138097	.	-	.	ID=Os02t0102700-01;Name=Os02t0102700-01;Locus_id=Os02g0102700;Note=Similar to AGL157Cp.;Transcript_evidence=AK061193 (DDBJ, Best hit),AK103689 (DDBJ, Best hit);ORF_evidence=B6UGP6 (UniProt);NIAS_FLcDNA=006-209-F11,J033136G21;PGFD=Os02t0102700-01;IDCGP=Os02t0102700-01
chr02	irgsp1_rep	five_prime_UTR	137921	138097	.	-	.	Parent=Os02t0102700-01
chr02	irgsp1_rep	CDS	137762	137920	.	-	.	Parent=Os02t0102700-01
chr02	irgsp1_rep	CDS	137559	137678	.	-	.	Parent=Os02t0102700-01
chr02	irgsp1_rep	CDS	137426	137482	.	-	.	Parent=Os02t0102700-01
chr02	irgsp1_rep	CDS	135655	135717	.	-	.	Parent=Os02t0102700-01
chr02	irgsp1_rep	three_prime_UTR	135305	135654	.	-	.	Parent=Os02t0102700-01
chr02	irgsp1_rep	mRNA	135302	138075	.	-	.	ID=Os02t0102700-02;Name=Os02t0102700-02;Locus_id=Os02g0102700;Note=Similar to AGL157Cp.;Transcript_evidence=AK061558 (DDBJ, Best hit);ORF_evidence=B6UGP6 (UniProt);InterPro=Like-Sm ribonucleoprotein (LSM) domain (IPR001163),Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (IPR006649),Like-Sm ribonucleoprotein (LSM)-related domain (IPR010920);NIAS_FLcDNA=006-311-C12
chr02	irgsp1_rep	five_prime_UTR	137921	138075	.	-	.	Parent=Os02t0102700-02
chr02	irgsp1_rep	CDS	137762	137920	.	-	.	Parent=Os02t0102700-02
chr02	irgsp1_rep	CDS	137559	137678	.	-	.	Parent=Os02t0102700-02
chr02	irgsp1_rep	CDS	137426	137482	.	-	.	Parent=Os02t0102700-02
chr02	irgsp1_rep	CDS	135655	135717	.	-	.	Parent=Os02t0102700-02
chr02	irgsp1_rep	three_prime_UTR	135302	135654	.	-	.	Parent=Os02t0102700-02
chr02	irgsp1_rep	mRNA	146494	152581	.	+	.	ID=Os02t0102800-01;Name=Os02t0102800-01;Locus_id=Os02g0102800;Note=Pleckstrin homology-type domain containing protein.;Transcript_evidence=AK070607 (DDBJ, Best hit);ORF_evidence=Q5K2M9 (UniProt);InterPro=Pleckstrin homology domain (IPR001849),Lipid-binding START (IPR002913),Domain of unknown function DUF1336 (IPR009769),Pleckstrin homology-type (IPR011993),START-like domain (IPR023393);GO=Molecular Function: protein binding (GO:0005515);KEGG=Os02t0102800-01;NIAS_FLcDNA=J023059B18;PGFD=Os02t0102800-01
chr02	irgsp1_rep	five_prime_UTR	146494	146663	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	146664	147002	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	147962	148036	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	148181	148234	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	148323	148388	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	148739	148836	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	148937	148992	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	149082	149197	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	149283	149324	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	149427	149527	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	149629	149724	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	149905	149969	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	150048	150119	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	150279	150434	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	150537	150772	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	150874	150904	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	151020	151165	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	151264	151365	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	151469	151513	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	151614	151754	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	CDS	151837	152214	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	three_prime_UTR	152215	152581	.	+	.	Parent=Os02t0102800-01
chr02	irgsp1_rep	mRNA	149946	152456	.	+	.	ID=Os02t0102800-02;Name=Os02t0102800-02;Locus_id=Os02g0102800;Note=Similar to START domain-containing protein.;Transcript_evidence=AK070993 (DDBJ, Best hit);ORF_evidence=Q5K2M9 (UniProt);InterPro=Lipid-binding START (IPR002913),Domain of unknown function DUF1336 (IPR009769),START-like domain (IPR023393);KEGG=Os02t0102800-02;NIAS_FLcDNA=J023078M16;PGFD=Os02t0102800-02
chr02	irgsp1_rep	five_prime_UTR	149946	149947	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	149948	149969	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	150048	150119	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	150279	150434	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	150537	150772	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	150874	150904	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	151020	151165	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	151264	151365	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	151469	151513	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	151614	151754	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	151837	151875	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	CDS	152169	152189	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	three_prime_UTR	152190	152456	.	+	.	Parent=Os02t0102800-02
chr02	irgsp1_rep	mRNA	152793	156036	.	+	.	ID=Os02t0102850-01;Name=Os02t0102850-01;Locus_id=Os02g0102850;Note=Conserved hypothetical protein.;Transcript_evidence=AK242995 (DDBJ, Best hit);ORF_evidence=NP_001172768.1 (RefSeq);KEGG=Os02t0102850-01;NIAS_FLcDNA=J090095I02;PGFD=Os02t0102850-01
chr02	irgsp1_rep	five_prime_UTR	152793	153338	.	+	.	Parent=Os02t0102850-01
chr02	irgsp1_rep	CDS	153339	153638	.	+	.	Parent=Os02t0102850-01
chr02	irgsp1_rep	three_prime_UTR	153639	153745	.	+	.	Parent=Os02t0102850-01
chr02	irgsp1_rep	three_prime_UTR	153992	154106	.	+	.	Parent=Os02t0102850-01
chr02	irgsp1_rep	three_prime_UTR	154324	156036	.	+	.	Parent=Os02t0102850-01
chr02	irgsp1_rep	mRNA	158662	163728	.	+	.	ID=Os02t0102900-01;Name=Os02t0102900-01;Locus_id=Os02g0102900;Note=Similar to RuBisCO subunit binding-protein beta subunit, chloroplast (60 kDa chaperonin beta subunit) (CPN-60 beta) (Fragment).;Transcript_evidence=AK070603 (DDBJ, Best hit),AK101537 (DDBJ, Best hit);ORF_evidence=B6THN2 (UniProt);InterPro=Chaperonin Cpn60 (IPR001844),Chaperonin Cpn60/TCP-1 (IPR002423),Chaperonin Cpn60, conserved site (IPR018370);GO=Biological Process: protein folding (GO:0006457),Biological Process: protein refolding (GO:0042026),Biological Process: cellular protein metabolic process (GO:0044267),Cellular Component: cytoplasm (GO:0005737),Molecular Function: ATP binding (GO:0005524);NIAS_FLcDNA=J023059D06,J033048E22;PGFD=Os02t0102900-01;IDCGP=Os02t0102900-01
chr02	irgsp1_rep	five_prime_UTR	158662	158770	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	five_prime_UTR	159590	159594	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	159595	159801	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	159892	160017	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	160201	160338	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	160431	160526	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	160958	161200	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	161303	161537	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	161612	161781	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	161975	162052	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	162156	162227	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	162345	162449	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	162555	162647	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	162737	162829	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	163109	163235	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	CDS	163317	163330	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	three_prime_UTR	163331	163728	.	+	.	Parent=Os02t0102900-01
chr02	irgsp1_rep	mRNA	159579	163226	.	-	.	ID=Os02t0102950-00;Name=Os02t0102950-00;Locus_id=Os02g0102950;Note=Hypothetical protein.;Transcript_evidence=tplb0058a16 (Wheat FLcDNA);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	163107	163226	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	five_prime_UTR	162723	162827	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	five_prime_UTR	162561	162639	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	five_prime_UTR	162419	162455	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	CDS	162343	162418	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	CDS	162145	162225	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	CDS	161985	162041	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	CDS	161704	161783	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	three_prime_UTR	161584	161703	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	three_prime_UTR	161318	161509	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	three_prime_UTR	160974	161212	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	three_prime_UTR	160429	160538	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	three_prime_UTR	160199	160336	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	three_prime_UTR	159890	160014	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	three_prime_UTR	159579	159795	.	-	.	Parent=Os02t0102950-00
chr02	irgsp1_rep	mRNA	163662	164372	.	-	.	ID=Os02t0103000-01;Name=Os02t0103000-01;Locus_id=Os02g0103000;Note=Conserved hypothetical protein.;Transcript_evidence=AK110906 (DDBJ, Best hit);ORF_evidence=A2WZS8 (UniProt);KEGG=Os02t0103000-01;NIAS_FLcDNA=002-173-B08;PGFD=Os02t0103000-01
chr02	irgsp1_rep	five_prime_UTR	164330	164372	.	-	.	Parent=Os02t0103000-01
chr02	irgsp1_rep	CDS	163859	164329	.	-	.	Parent=Os02t0103000-01
chr02	irgsp1_rep	three_prime_UTR	163662	163858	.	-	.	Parent=Os02t0103000-01
chr02	irgsp1_rep	mRNA	163892	174036	.	+	.	ID=Os02t0103100-01;Name=Os02t0103100-01;Locus_id=Os02g0103100;Note=Hypothetical protein.;Transcript_evidence=AK071040 (DDBJ, Best hit);ORF_evidence=longestORF;NIAS_FLcDNA=J023079H22
chr02	irgsp1_rep	CDS	163892	164311	.	+	.	Parent=Os02t0103100-01
chr02	irgsp1_rep	CDS	172263	172283	.	+	.	Parent=Os02t0103100-01
chr02	irgsp1_rep	three_prime_UTR	172284	174036	.	+	.	Parent=Os02t0103100-01
chr02	irgsp1_rep	mRNA	165493	166232	.	-	.	ID=Os02t0103200-00;Name=Os02t0103200-00;Locus_id=Os02g0103200;Note=Hypothetical conserved gene.;Transcript_evidence=CT835329 (DDBJ, Best hit);ORF_evidence=A3A265 (UniProt);InterPro=Pectinesterase inhibitor (IPR006501);GO=Molecular Function: enzyme inhibitor activity (GO:0004857),Molecular Function: pectinesterase activity (GO:0030599);KEGG=Os02t0103200-00;PGFD=Os02t0103200-00;IDCGP=Os02t0103200-00
chr02	irgsp1_rep	five_prime_UTR	166186	166232	.	-	.	Parent=Os02t0103200-00
chr02	irgsp1_rep	CDS	165640	166185	.	-	.	Parent=Os02t0103200-00
chr02	irgsp1_rep	three_prime_UTR	165493	165639	.	-	.	Parent=Os02t0103200-00
chr02	irgsp1_rep	mRNA	168443	169528	.	-	.	ID=Os02t0103300-01;Name=Os02t0103300-01;Locus_id=Os02g0103300;Note=Pectinesterase inhibitor domain containing protein.;Transcript_evidence=AK069788 (DDBJ, Best hit);ORF_evidence=B6T2U1 (UniProt);InterPro=Pectinesterase inhibitor (IPR006501);GO=Molecular Function: enzyme inhibitor activity (GO:0004857),Molecular Function: pectinesterase activity (GO:0030599);KEGG=Os02t0103300-01;NIAS_FLcDNA=J023030J21;PGFD=Os02t0103300-01;IDCGP=Os02t0103300-01
chr02	irgsp1_rep	five_prime_UTR	169311	169528	.	-	.	Parent=Os02t0103300-01
chr02	irgsp1_rep	CDS	168684	169310	.	-	.	Parent=Os02t0103300-01
chr02	irgsp1_rep	three_prime_UTR	168443	168683	.	-	.	Parent=Os02t0103300-01
chr02	irgsp1_rep	mRNA	172243	173824	-0.760671	-	.	ID=Os02t0103500-00;Name=Os02t0103500-00;Locus_id=Os02g0103500;Note=Similar to nodulin protein.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001151682.1 (RefSeq);InterPro=Drug/metabolite transporter (IPR000620);GO=Cellular Component: membrane (GO:0016020);KEGG=Os02t0103500-00;PGFD=Os02t0103500-00
chr02	irgsp1_rep	CDS	173640	173824	-1.99442	-	0	Parent=Os02t0103500-00
chr02	irgsp1_rep	CDS	173482	173544	-2.78149	-	1	Parent=Os02t0103500-00
chr02	irgsp1_rep	CDS	172801	173341	-2.03523	-	1	Parent=Os02t0103500-00
chr02	irgsp1_rep	CDS	172550	172701	-2.03523	-	0	Parent=Os02t0103500-00
chr02	irgsp1_rep	CDS	172243	172435	-2.04628	-	1	Parent=Os02t0103500-00
chr02	irgsp1_rep	mRNA	175818	179370	.	-	.	ID=Os02t0103600-01;Name=Os02t0103600-01;Locus_id=Os02g0103600;Note=Protein of unknown function DUF6, transmembrane domain containing protein.;Transcript_evidence=AK070945 (DDBJ, Best hit);ORF_evidence=NP_001151682.1 (RefSeq);InterPro=Drug/metabolite transporter (IPR000620);GO=Cellular Component: membrane (GO:0016020);KEGG=Os02t0103600-01;NIAS_FLcDNA=J023072N08;PGFD=Os02t0103600-01
chr02	irgsp1_rep	five_prime_UTR	179146	179370	.	-	.	Parent=Os02t0103600-01
chr02	irgsp1_rep	CDS	178964	179145	.	-	.	Parent=Os02t0103600-01
chr02	irgsp1_rep	CDS	178260	178322	.	-	.	Parent=Os02t0103600-01
chr02	irgsp1_rep	CDS	178010	178126	.	-	.	Parent=Os02t0103600-01
chr02	irgsp1_rep	CDS	177166	177577	.	-	.	Parent=Os02t0103600-01
chr02	irgsp1_rep	CDS	176495	176646	.	-	.	Parent=Os02t0103600-01
chr02	irgsp1_rep	CDS	176002	176137	.	-	.	Parent=Os02t0103600-01
chr02	irgsp1_rep	three_prime_UTR	175818	176001	.	-	.	Parent=Os02t0103600-01
chr02	irgsp1_rep	mRNA	180352	183440	.	-	.	ID=Os02t0103700-01;Name=Os02t0103700-01;Locus_id=Os02g0103700;Note=Similar to 60S ribosomal protein L9 (Gibberellin-regulated protein GA).;Transcript_evidence=AK102186 (DDBJ, Best hit),AK062502 (DDBJ, Best hit);ORF_evidence=A2Z2J3 (UniProt);InterPro=Ribosomal protein L6 (IPR000702),Ribosomal protein L6, conserved site-2 (IPR002359),Ribosomal protein L6, alpha-beta domain (IPR020040);GO=Biological Process: translation (GO:0006412),Cellular Component: intracellular (GO:0005622),Cellular Component: ribosome (GO:0005840),Molecular Function: structural constituent of ribosome (GO:0003735),Molecular Function: rRNA binding (GO:0019843);KEGG=Os02t0103700-01;NIAS_FLcDNA=J033086N17,001-104-A12;PGFD=Os02t0103700-01;IDCGP=Os02t0103700-01
chr02	irgsp1_rep	five_prime_UTR	183356	183440	.	-	.	Parent=Os02t0103700-01
chr02	irgsp1_rep	CDS	182987	183355	.	-	.	Parent=Os02t0103700-01
chr02	irgsp1_rep	CDS	182394	182516	.	-	.	Parent=Os02t0103700-01
chr02	irgsp1_rep	CDS	180601	180687	.	-	.	Parent=Os02t0103700-01
chr02	irgsp1_rep	three_prime_UTR	180352	180600	.	-	.	Parent=Os02t0103700-01
chr02	irgsp1_rep	mRNA	183655	185325	.	-	.	ID=Os02t0103800-01;Name=Os02t0103800-01;Locus_id=Os02g0103800;Note=Similar to Ferredoxin--NADP reductase.;Transcript_evidence=AK065309 (DDBJ, Best hit);ORF_evidence=Q8RVZ8 (UniProt);InterPro=Oxidoreductase FAD/NAD(P)-binding (IPR001433),Flavoprotein pyridine nucleotide cytochrome reductase (IPR001709),Oxidoreductase, FAD-binding domain (IPR008333),Ferredoxin--NADP reductase (IPR012146),Ferredoxin Reductase (IPR015701),Ferredoxin reductase-type FAD-binding domain (IPR017927),Riboflavin synthase-like beta-barrel (IPR017938);GO=Biological Process: oxidation-reduction process (GO:0055114),Cellular Component: thylakoid membrane (GO:0042651),Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324),Molecular Function: oxidoreductase activity (GO:0016491),Molecular Function: flavin adenine dinucleotide binding (GO:0050660),Molecular Function: NADP binding (GO:0050661);NIAS_FLcDNA=J013002O13;Oryzabase=9584;CGSNL Gene Symbol=_;CGSNL Gene Name=_;CGSNL Gene Symbol Synonym(s)=OsLFNR1, LFNR1;CGSNL Gene Name Synonym(s)=leaf-type ferredoxin-NADP+-oxidoreductase 1, leaf-type FNR 1, Fd NADP+ oxidoreductase 1;PGFD=Os02t0103800-01;IDCGP=Os02t0103800-01
chr02	irgsp1_rep	five_prime_UTR	185184	185325	.	-	.	Parent=Os02t0103800-01
chr02	irgsp1_rep	CDS	184698	185183	.	-	.	Parent=Os02t0103800-01
chr02	irgsp1_rep	CDS	184526	184604	.	-	.	Parent=Os02t0103800-01
chr02	irgsp1_rep	CDS	183986	184453	.	-	.	Parent=Os02t0103800-01
chr02	irgsp1_rep	CDS	183836	183903	.	-	.	Parent=Os02t0103800-01
chr02	irgsp1_rep	three_prime_UTR	183655	183835	.	-	.	Parent=Os02t0103800-01
chr02	irgsp1_rep	mRNA	183609	185249	.	-	.	ID=Os02t0103800-02;Name=Os02t0103800-02;Locus_id=Os02g0103800;Note=Similar to Ferredoxin NADP+ reductase (EC 1.18.1.2) (Fragment).;Transcript_evidence=AK106213 (DDBJ, Best hit);ORF_evidence=Q8RVZ8 (UniProt);InterPro=Oxidoreductase FAD/NAD(P)-binding (IPR001433),Flavoprotein pyridine nucleotide cytochrome reductase (IPR001709),Oxidoreductase, FAD-binding domain (IPR008333),Ferredoxin--NADP reductase (IPR012146),Ferredoxin Reductase (IPR015701),Ferredoxin reductase-type FAD-binding domain (IPR017927),Riboflavin synthase-like beta-barrel (IPR017938);GO=Biological Process: oxidation-reduction process (GO:0055114),Cellular Component: thylakoid membrane (GO:0042651),Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324),Molecular Function: oxidoreductase activity (GO:0016491),Molecular Function: flavin adenine dinucleotide binding (GO:0050660),Molecular Function: NADP binding (GO:0050661);KEGG=Os02t0103800-02 (EC:1.18.1.2);NIAS_FLcDNA=001-208-G10;PGFD=Os02t0103800-02
chr02	irgsp1_rep	five_prime_UTR	185184	185249	.	-	.	Parent=Os02t0103800-02
chr02	irgsp1_rep	CDS	184698	185183	.	-	.	Parent=Os02t0103800-02
chr02	irgsp1_rep	CDS	184526	184604	.	-	.	Parent=Os02t0103800-02
chr02	irgsp1_rep	CDS	184199	184453	.	-	.	Parent=Os02t0103800-02
chr02	irgsp1_rep	CDS	183986	184150	.	-	.	Parent=Os02t0103800-02
chr02	irgsp1_rep	CDS	183836	183903	.	-	.	Parent=Os02t0103800-02
chr02	irgsp1_rep	three_prime_UTR	183609	183835	.	-	.	Parent=Os02t0103800-02
chr02	irgsp1_rep	mRNA	183661	185222	.	-	.	ID=Os02t0103800-03;Name=Os02t0103800-03;Locus_id=Os02g0103800;Note=Similar to Ferredoxin--NADP reductase.;Transcript_evidence=AK061774 (DDBJ, Best hit);ORF_evidence=Q8RVZ8 (UniProt);InterPro=Oxidoreductase FAD/NAD(P)-binding (IPR001433),Flavoprotein pyridine nucleotide cytochrome reductase (IPR001709),Oxidoreductase, FAD-binding domain (IPR008333),Ferredoxin--NADP reductase (IPR012146),Ferredoxin Reductase (IPR015701),Ferredoxin reductase-type FAD-binding domain (IPR017927),Riboflavin synthase-like beta-barrel (IPR017938);GO=Biological Process: oxidation-reduction process (GO:0055114),Cellular Component: thylakoid membrane (GO:0042651),Molecular Function: ferredoxin-NADP+ reductase activity (GO:0004324),Molecular Function: oxidoreductase activity (GO:0016491),Molecular Function: flavin adenine dinucleotide binding (GO:0050660),Molecular Function: NADP binding (GO:0050661);NIAS_FLcDNA=001-039-D02
chr02	irgsp1_rep	five_prime_UTR	185184	185222	.	-	.	Parent=Os02t0103800-03
chr02	irgsp1_rep	CDS	184698	185183	.	-	.	Parent=Os02t0103800-03
chr02	irgsp1_rep	CDS	184526	184604	.	-	.	Parent=Os02t0103800-03
chr02	irgsp1_rep	CDS	183986	184453	.	-	.	Parent=Os02t0103800-03
chr02	irgsp1_rep	CDS	183836	183903	.	-	.	Parent=Os02t0103800-03
chr02	irgsp1_rep	three_prime_UTR	183661	183835	.	-	.	Parent=Os02t0103800-03
chr02	irgsp1_rep	mRNA	183835	185184	.	+	.	ID=Os02t0103850-00;Name=Os02t0103850-00;Locus_id=Os02g0103850;Note=Hypothetical protein.;Transcript_evidence=tplb0050d18 (Wheat FLcDNA);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	183835	183835	.	+	.	Parent=Os02t0103850-00
chr02	irgsp1_rep	CDS	183836	183895	.	+	.	Parent=Os02t0103850-00
chr02	irgsp1_rep	CDS	183978	184448	.	+	.	Parent=Os02t0103850-00
chr02	irgsp1_rep	CDS	184521	184601	.	+	.	Parent=Os02t0103850-00
chr02	irgsp1_rep	CDS	184695	185184	.	+	.	Parent=Os02t0103850-00
chr02	irgsp1_rep	mRNA	187508	192121	.	-	.	ID=Os02t0103900-01;Name=Os02t0103900-01;Locus_id=Os02g0103900;Note=U3 small nucleolar RNA-associated protein 6 domain containing protein.;Transcript_evidence=AK070601 (DDBJ, Best hit);ORF_evidence=B8AGW0 (UniProt);InterPro=RNA-processing protein, HAT helix (IPR003107),Tetratricopeptide-like helical (IPR011990),U3 small nucleolar RNA-associated protein 6 (IPR013949);GO=Biological Process: RNA processing (GO:0006396),Cellular Component: intracellular (GO:0005622),Molecular Function: binding (GO:0005488);KEGG=Os02t0103900-01;NIAS_FLcDNA=J023057B08;PGFD=Os02t0103900-01
chr02	irgsp1_rep	five_prime_UTR	192042	192121	.	-	.	Parent=Os02t0103900-01
chr02	irgsp1_rep	CDS	191566	192041	.	-	.	Parent=Os02t0103900-01
chr02	irgsp1_rep	CDS	189557	190211	.	-	.	Parent=Os02t0103900-01
chr02	irgsp1_rep	CDS	188917	189399	.	-	.	Parent=Os02t0103900-01
chr02	irgsp1_rep	CDS	188468	188640	.	-	.	Parent=Os02t0103900-01
chr02	irgsp1_rep	CDS	187996	188179	.	-	.	Parent=Os02t0103900-01
chr02	irgsp1_rep	CDS	187798	187887	.	-	.	Parent=Os02t0103900-01
chr02	irgsp1_rep	three_prime_UTR	187508	187797	.	-	.	Parent=Os02t0103900-01
chr02	irgsp1_rep	mRNA	187520	189391	.	-	.	ID=Os02t0103900-02;Name=Os02t0103900-02;Locus_id=Os02g0103900;Note=Hypothetical conserved gene.;Transcript_evidence=AK059499 (DDBJ, Best hit);ORF_evidence=A3A269 (UniProt);InterPro=RNA-processing protein, HAT helix (IPR003107),Tetratricopeptide-like helical (IPR011990);GO=Biological Process: RNA processing (GO:0006396),Cellular Component: intracellular (GO:0005622),Molecular Function: binding (GO:0005488);KEGG=Os02t0103900-02;NIAS_FLcDNA=001-028-H12;PGFD=Os02t0103900-02
chr02	irgsp1_rep	five_prime_UTR	189391	189391	.	-	.	Parent=Os02t0103900-02
chr02	irgsp1_rep	CDS	188917	189390	.	-	.	Parent=Os02t0103900-02
chr02	irgsp1_rep	CDS	188468	188640	.	-	.	Parent=Os02t0103900-02
chr02	irgsp1_rep	CDS	187996	188179	.	-	.	Parent=Os02t0103900-02
chr02	irgsp1_rep	CDS	187798	187887	.	-	.	Parent=Os02t0103900-02
chr02	irgsp1_rep	three_prime_UTR	187520	187797	.	-	.	Parent=Os02t0103900-02
chr02	irgsp1_rep	mRNA	199223	204482	.	+	.	ID=Os02t0104100-00;Name=Os02t0104100-00;Locus_id=Os02g0104100;Note=Similar to MADS-box transcription factor TaAGL18.;Transcript_evidence=FP098509 (DDBJ);ORF_evidence=Q1G190 (UniProt);InterPro=Transcription factor, MADS-box (IPR002100),Transcription factor, K-box (IPR002487);GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355),Cellular Component: nucleus (GO:0005634),Molecular Function: DNA binding (GO:0003677),Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700),Molecular Function: protein dimerization activity (GO:0046983)
chr02	irgsp1_rep	five_prime_UTR	199223	199223	.	+	.	Parent=Os02t0104100-00
chr02	irgsp1_rep	CDS	199224	199531	.	+	.	Parent=Os02t0104100-00
chr02	irgsp1_rep	CDS	202806	202887	.	+	.	Parent=Os02t0104100-00
chr02	irgsp1_rep	CDS	203397	203458	.	+	.	Parent=Os02t0104100-00
chr02	irgsp1_rep	CDS	203566	203665	.	+	.	Parent=Os02t0104100-00
chr02	irgsp1_rep	CDS	203875	203916	.	+	.	Parent=Os02t0104100-00
chr02	irgsp1_rep	CDS	204264	204482	.	+	.	Parent=Os02t0104100-00
chr02	irgsp1_rep	mRNA	204578	204914	.	+	.	ID=Os02t0104150-00;Name=Os02t0104150-00;Locus_id=Os02g0104150;Note=Non-protein coding transcript.;Transcript_evidence=CT835343 (DDBJ, Best hit);ORF_evidence=NONE
chr02	irgsp1_rep	exon	204578	204914	.	+	.	Parent=Os02t0104150-00
chr02	irgsp1_rep	mRNA	205432	207453	.	+	.	ID=Os02t0104200-01;Name=Os02t0104200-01;Locus_id=Os02g0104200;Note=Conserved hypothetical protein.;Transcript_evidence=AK060830 (DDBJ, Best hit);ORF_evidence=B8AGW2 (UniProt);KEGG=Os02t0104200-01;NIAS_FLcDNA=001-034-C03;PGFD=Os02t0104200-01;IDCGP=Os02t0104200-01
chr02	irgsp1_rep	five_prime_UTR	205432	205621	.	+	.	Parent=Os02t0104200-01
chr02	irgsp1_rep	five_prime_UTR	206179	206549	.	+	.	Parent=Os02t0104200-01
chr02	irgsp1_rep	CDS	206550	207221	.	+	.	Parent=Os02t0104200-01
chr02	irgsp1_rep	three_prime_UTR	207222	207453	.	+	.	Parent=Os02t0104200-01
chr02	irgsp1_rep	mRNA	205458	207444	.	+	.	ID=Os02t0104200-02;Name=Os02t0104200-02;Locus_id=Os02g0104200;Note=Conserved hypothetical protein.;Transcript_evidence=AK121824 (DDBJ, Best hit);ORF_evidence=B8AGW2 (UniProt);KEGG=Os02t0104200-02;NIAS_FLcDNA=J033099F22;PGFD=Os02t0104200-02
chr02	irgsp1_rep	five_prime_UTR	205458	205621	.	+	.	Parent=Os02t0104200-02
chr02	irgsp1_rep	five_prime_UTR	206179	206549	.	+	.	Parent=Os02t0104200-02
chr02	irgsp1_rep	CDS	206550	207221	.	+	.	Parent=Os02t0104200-02
chr02	irgsp1_rep	three_prime_UTR	207222	207444	.	+	.	Parent=Os02t0104200-02
chr02	irgsp1_rep	mRNA	219736	221602	.	-	.	ID=Os02t0104500-01;Name=Os02t0104500-01;Locus_id=Os02g0104500;Note=MYB-like domain containing protein.;Transcript_evidence=AK120063 (DDBJ, Best hit);ORF_evidence=A3A272 (UniProt);InterPro=MYB-like (IPR017877);NIAS_FLcDNA=J013001K22
chr02	irgsp1_rep	five_prime_UTR	221479	221602	.	-	.	Parent=Os02t0104500-01
chr02	irgsp1_rep	CDS	220036	221478	.	-	.	Parent=Os02t0104500-01
chr02	irgsp1_rep	three_prime_UTR	219736	220035	.	-	.	Parent=Os02t0104500-01
chr02	irgsp1_rep	mRNA	261348	265491	.	+	.	ID=Os02t0104700-01;Name=Os02t0104700-01;Locus_id=Os02g0104700;Note=Nitric oxide synthase, Chloroplast ribosome biogenesis and/or translation;Transcript_evidence=Inferred from literature;ORF_evidence=Q6YPG5 (UniProt),Q0E4R0 (UniProt);CGSNL Gene Symbol Synonym(s)=OsNOA1/RIF1, OsNOA1, NOA1, NOS1;CGSNL Gene Name Synonym(s)=Oryza sativa nitric oxide associated protein 1 (NOA1)/resistant to inhibition with FSM 1(RIF1), Nitric Oxide-Associated1, Nitric oxide synthase 1;Literature_PMID=20456051;Manual Curation=July 2, 2010;Oryzabase=9403;InterPro=GTP binding domain (IPR006073);GO=Molecular Function: GTP binding (GO:0005525)
chr02	irgsp1_rep	five_prime_UTR	261348	261404	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	261405	261779	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	261880	262065	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	262185	262271	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	262341	262420	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	262518	262599	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	262794	262814	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	263204	263249	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	263365	263483	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	263685	263798	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	263885	263959	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	264068	264157	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	264604	264713	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	CDS	264902	265160	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	three_prime_UTR	265161	265491	.	+	.	Parent=Os02t0104700-01
chr02	irgsp1_rep	mRNA	261338	265329	.	+	.	ID=Os02t0104700-02;Name=Os02t0104700-02;Locus_id=Os02g0104700;Note=Similar to Nitric oxide associated 1.;Transcript_evidence=AK288268 (DDBJ, Best hit);ORF_evidence=A8R0L3 (UniProt);InterPro=GTP-binding protein, riobosome biogenesis, YqeH (IPR019988);NIAS_FLcDNA=J090016N14;PGFD=Os02t0104700-02
chr02	irgsp1_rep	five_prime_UTR	261338	261404	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	CDS	261405	261779	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	CDS	261880	262065	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	CDS	262185	262271	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	CDS	262341	262420	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	CDS	262518	262644	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	three_prime_UTR	262645	263483	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	three_prime_UTR	263685	263798	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	three_prime_UTR	263898	263959	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	three_prime_UTR	264068	264713	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	three_prime_UTR	264902	265329	.	+	.	Parent=Os02t0104700-02
chr02	irgsp1_rep	mRNA	265795	268839	.	+	.	ID=Os02t0104800-01;Name=Os02t0104800-01;Locus_id=Os02g0104800;Note=Uncharacterised conserved protein UCP022280 domain containing protein.;Transcript_evidence=AK070860 (DDBJ, Best hit);ORF_evidence=B8AGW4 (UniProt);InterPro=Uncharacterised conserved protein UCP022280 (IPR016803);KEGG=Os02t0104800-01;NIAS_FLcDNA=J023067K03;PGFD=Os02t0104800-01;IDCGP=Os02t0104800-01
chr02	irgsp1_rep	five_prime_UTR	265795	265846	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	265847	266137	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	266241	266307	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	266489	266566	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	267141	267193	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	267579	267662	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	267762	267810	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	267898	267966	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	268073	268131	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	CDS	268467	268556	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	three_prime_UTR	268557	268839	.	+	.	Parent=Os02t0104800-01
chr02	irgsp1_rep	mRNA	274455	277232	.	+	.	ID=Os02t0105000-01;Name=Os02t0105000-01;Locus_id=Os02g0105000;Note=Nucleotide-binding, alpha-beta plait domain containing protein.;Transcript_evidence=AK060064 (DDBJ, Best hit);ORF_evidence=NP_001146882.1 (RefSeq);InterPro=RNA recognition motif domain (IPR000504),Nucleotide-binding, alpha-beta plait (IPR012677);GO=Molecular Function: nucleotide binding (GO:0000166),Molecular Function: nucleic acid binding (GO:0003676);KEGG=Os02t0105000-01;NIAS_FLcDNA=006-305-H01;PGFD=Os02t0105000-01;IDCGP=Os02t0105000-01
chr02	irgsp1_rep	five_prime_UTR	274455	274709	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	CDS	274710	274762	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	CDS	274834	274917	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	CDS	274990	275070	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	CDS	275366	275505	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	CDS	275655	275748	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	CDS	276393	276462	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	CDS	276783	276845	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	CDS	276935	277012	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	three_prime_UTR	277013	277232	.	+	.	Parent=Os02t0105000-01
chr02	irgsp1_rep	mRNA	274460	277289	.	+	.	ID=Os02t0105000-02;Name=Os02t0105000-02;Locus_id=Os02g0105000;Note=Similar to nucleic acid binding protein.;Transcript_evidence=AK103456 (DDBJ, Best hit);ORF_evidence=NP_001146882.1 (RefSeq);NIAS_FLcDNA=J033129K17
chr02	irgsp1_rep	five_prime_UTR	274460	274762	.	+	.	Parent=Os02t0105000-02
chr02	irgsp1_rep	five_prime_UTR	274834	275273	.	+	.	Parent=Os02t0105000-02
chr02	irgsp1_rep	CDS	275274	275573	.	+	.	Parent=Os02t0105000-02
chr02	irgsp1_rep	three_prime_UTR	275574	276845	.	+	.	Parent=Os02t0105000-02
chr02	irgsp1_rep	three_prime_UTR	276935	277289	.	+	.	Parent=Os02t0105000-02
chr02	irgsp1_rep	mRNA	279365	286448	.	+	.	ID=Os02t0105100-01;Name=Os02t0105100-01;Locus_id=Os02g0105100;Note=Sec16, central conserved domain domain containing protein.;Transcript_evidence=AK122164 (DDBJ, Best hit);ORF_evidence=B9F1Q3 (UniProt);InterPro=Sec16, central conserved domain (IPR024340);NIAS_FLcDNA=J033147K10
chr02	irgsp1_rep	five_prime_UTR	279365	279582	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	CDS	279583	281622	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	CDS	281724	282047	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	CDS	282315	282473	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	282474	282648	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	282768	282923	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	283224	283349	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	283426	283560	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	283815	283942	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	284037	284148	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	284233	284547	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	284655	284771	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	284871	285166	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	three_prime_UTR	285252	286448	.	+	.	Parent=Os02t0105100-01
chr02	irgsp1_rep	mRNA	284510	286448	.	+	.	ID=Os02t0105100-02;Name=Os02t0105100-02;Locus_id=Os02g0105100;Note=Hypothetical conserved gene.;Transcript_evidence=AK106550 (DDBJ, Best hit);ORF_evidence=B9F1Q3 (UniProt);KEGG=Os02t0105100-02;NIAS_FLcDNA=002-108-G03;PGFD=Os02t0105100-02
chr02	irgsp1_rep	five_prime_UTR	284510	284511	.	+	.	Parent=Os02t0105100-02
chr02	irgsp1_rep	CDS	284512	284547	.	+	.	Parent=Os02t0105100-02
chr02	irgsp1_rep	CDS	284655	284771	.	+	.	Parent=Os02t0105100-02
chr02	irgsp1_rep	CDS	284871	285166	.	+	.	Parent=Os02t0105100-02
chr02	irgsp1_rep	CDS	285252	285795	.	+	.	Parent=Os02t0105100-02
chr02	irgsp1_rep	three_prime_UTR	285796	286448	.	+	.	Parent=Os02t0105100-02
chr02	irgsp1_rep	mRNA	287571	293885	.	+	.	ID=Os02t0105200-01;Name=Os02t0105200-01;Locus_id=Os02g0105200;Note=Similar to Dihydrolipoamide S-acetyltransferase (EC 2.3.1.12).;Transcript_evidence=AK063525 (DDBJ, Best hit);ORF_evidence=NP_001104936.1 (RefSeq);InterPro=Biotin/lipoyl attachment (IPR000089),2-oxoacid dehydrogenase acyltransferase, catalytic domain (IPR001078),2-oxo acid dehydrogenase, lipoyl-binding site (IPR003016),E3 binding (IPR004167),Dihydrolipoamide acetyltransferase, long form (IPR006257),Single hybrid motif (IPR011053),Chloramphenicol acetyltransferase-like domain (IPR023213);GO=Biological Process: pyruvate metabolic process (GO:0006090),Biological Process: metabolic process (GO:0008152),Cellular Component: pyruvate dehydrogenase complex (GO:0045254),Molecular Function: dihydrolipoyllysine-residue acetyltransferase activity (GO:0004742),Molecular Function: transferase activity, transferring acyl groups (GO:0016746);KEGG=Os02t0105200-01 (EC:2.3.1.12);NIAS_FLcDNA=001-117-A04;PGFD=Os02t0105200-01
chr02	irgsp1_rep	five_prime_UTR	287571	287727	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	287728	287763	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	287980	288082	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	288808	288881	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	288965	289062	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	289340	289380	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	289977	290032	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	290170	290244	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	290377	290469	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	290602	290850	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	290930	291002	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	291681	291766	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	291853	291938	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	292067	292142	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	292280	292347	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	292430	292496	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	292570	292665	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	292741	292843	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	293214	293309	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	CDS	293396	293466	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	three_prime_UTR	293467	293885	.	+	.	Parent=Os02t0105200-01
chr02	irgsp1_rep	mRNA	295303	298942	.	-	.	ID=Os02t0105300-01;Name=Os02t0105300-01;Locus_id=Os02g0105300;Note=Conserved hypothetical protein.;Transcript_evidence=AK106891 (DDBJ, Best hit);ORF_evidence=Q6YPG1 (UniProt);NIAS_FLcDNA=002-118-G06
chr02	irgsp1_rep	five_prime_UTR	298485	298942	.	-	.	Parent=Os02t0105300-01
chr02	irgsp1_rep	five_prime_UTR	296330	296446	.	-	.	Parent=Os02t0105300-01
chr02	irgsp1_rep	CDS	295562	296329	.	-	.	Parent=Os02t0105300-01
chr02	irgsp1_rep	three_prime_UTR	295303	295561	.	-	.	Parent=Os02t0105300-01
chr02	irgsp1_rep	mRNA	295324	299087	.	+	.	ID=Os02t0105400-01;Name=Os02t0105400-01;Locus_id=Os02g0105400;Note=Similar to L-lactate dehydrogenase A (EC 1.1.1.27) (LDH-A).;Transcript_evidence=AK103257 (DDBJ, Best hit);ORF_evidence=A2WZU6 (UniProt);InterPro=Lactate/malate dehydrogenase, N-terminal (IPR001236),L-lactate/malate dehydrogenase (IPR001557),L-lactate dehydrogenase (IPR011304),Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (IPR015955),NAD(P)-binding domain (IPR016040),L-lactate dehydrogenase, active site (IPR018177),Lactate/malate dehydrogenase, C-terminal (IPR022383);GO=Biological Process: carbohydrate metabolic process (GO:0005975),Biological Process: glycolysis (GO:0006096),Biological Process: cellular carbohydrate metabolic process (GO:0044262),Biological Process: oxidation-reduction process (GO:0055114),Cellular Component: cytoplasm (GO:0005737),Molecular Function: nucleotide binding (GO:0000166),Molecular Function: catalytic activity (GO:0003824),Molecular Function: L-lactate dehydrogenase activity (GO:0004459),Molecular Function: oxidoreductase activity (GO:0016491),Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);KEGG=Os02t0105400-01 (EC:1.1.1.27);NIAS_FLcDNA=J033124A12;PGFD=Os02t0105400-01;IDCGP=Os02t0105400-01
chr02	irgsp1_rep	five_prime_UTR	295324	295490	.	+	.	Parent=Os02t0105400-01
chr02	irgsp1_rep	CDS	295491	296222	.	+	.	Parent=Os02t0105400-01
chr02	irgsp1_rep	CDS	298479	298925	.	+	.	Parent=Os02t0105400-01
chr02	irgsp1_rep	three_prime_UTR	298926	299087	.	+	.	Parent=Os02t0105400-01
chr02	irgsp1_rep	mRNA	295498	299167	.	+	.	ID=Os02t0105400-02;Name=Os02t0105400-02;Locus_id=Os02g0105400;Note=Similar to L-lactate dehydrogenase.;Transcript_evidence=AK105416 (DDBJ, Best hit);ORF_evidence=A2WZU6 (UniProt);InterPro=Lactate/malate dehydrogenase, N-terminal (IPR001236),L-lactate/malate dehydrogenase (IPR001557),L-lactate dehydrogenase (IPR011304),Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal (IPR015955),NAD(P)-binding domain (IPR016040),L-lactate dehydrogenase, active site (IPR018177),Lactate/malate dehydrogenase, C-terminal (IPR022383);GO=Biological Process: carbohydrate metabolic process (GO:0005975),Biological Process: glycolysis (GO:0006096),Biological Process: cellular carbohydrate metabolic process (GO:0044262),Biological Process: oxidation-reduction process (GO:0055114),Cellular Component: cytoplasm (GO:0005737),Molecular Function: nucleotide binding (GO:0000166),Molecular Function: catalytic activity (GO:0003824),Molecular Function: L-lactate dehydrogenase activity (GO:0004459),Molecular Function: oxidoreductase activity (GO:0016491),Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616);KEGG=Os02t0105400-02 (EC:1.1.1.27);NIAS_FLcDNA=001-124-A01;PGFD=Os02t0105400-02
chr02	irgsp1_rep	five_prime_UTR	295498	295607	.	+	.	Parent=Os02t0105400-02
chr02	irgsp1_rep	CDS	295608	296222	.	+	.	Parent=Os02t0105400-02
chr02	irgsp1_rep	CDS	298479	298925	.	+	.	Parent=Os02t0105400-02
chr02	irgsp1_rep	three_prime_UTR	298926	299167	.	+	.	Parent=Os02t0105400-02
chr02	irgsp1_rep	mRNA	299744	300802	.	-	.	ID=Os02t0105450-01;Name=Os02t0105450-01;Locus_id=Os02g0105450;Note=Non-protein coding transcript.;Transcript_evidence=AK120505 (DDBJ, Best hit);ORF_evidence=NONE;NIAS_FLcDNA=J013123A20
chr02	irgsp1_rep	exon	299744	300802	.	-	.	Parent=Os02t0105450-01
chr02	irgsp1_rep	mRNA	300074	302799	.	+	.	ID=Os02t0105500-01;Name=Os02t0105500-01;Locus_id=Os02g0105500;Note=IQ calmodulin-binding region domain containing protein.;Transcript_evidence=AK102953 (DDBJ, Best hit);ORF_evidence=B6T2R4 (UniProt);KEGG=Os02t0105500-01;NIAS_FLcDNA=J033115E12;PGFD=Os02t0105500-01;IDCGP=Os02t0105500-01
chr02	irgsp1_rep	five_prime_UTR	300074	300121	.	+	.	Parent=Os02t0105500-01
chr02	irgsp1_rep	CDS	300122	300907	.	+	.	Parent=Os02t0105500-01
chr02	irgsp1_rep	CDS	301447	301722	.	+	.	Parent=Os02t0105500-01
chr02	irgsp1_rep	CDS	302347	302481	.	+	.	Parent=Os02t0105500-01
chr02	irgsp1_rep	three_prime_UTR	302482	302799	.	+	.	Parent=Os02t0105500-01
chr02	irgsp1_rep	mRNA	300109	302819	.	+	.	ID=Os02t0105500-02;Name=Os02t0105500-02;Locus_id=Os02g0105500;Note=IQ calmodulin-binding region domain containing protein.;Transcript_evidence=AK063929 (DDBJ, Best hit);ORF_evidence=B6T2R4 (UniProt);KEGG=Os02t0105500-02;NIAS_FLcDNA=001-123-C12;PGFD=Os02t0105500-02
chr02	irgsp1_rep	five_prime_UTR	300109	300121	.	+	.	Parent=Os02t0105500-02
chr02	irgsp1_rep	CDS	300122	300907	.	+	.	Parent=Os02t0105500-02
chr02	irgsp1_rep	CDS	301447	301722	.	+	.	Parent=Os02t0105500-02
chr02	irgsp1_rep	CDS	302347	302481	.	+	.	Parent=Os02t0105500-02
chr02	irgsp1_rep	three_prime_UTR	302482	302819	.	+	.	Parent=Os02t0105500-02
chr02	irgsp1_rep	mRNA	304089	304849	-0.922131	-	.	ID=Os02t0105600-00;Name=Os02t0105600-00;Locus_id=Os02g0105600;Note=Similar to OSIGBa0158F13.2 protein.;Transcript_evidence=ab initio prediction;ORF_evidence=Q01K45 (UniProt)
chr02	irgsp1_rep	CDS	304826	304849	-4.25602	-	0	Parent=Os02t0105600-00
chr02	irgsp1_rep	CDS	304089	304478	-1.29668	-	0	Parent=Os02t0105600-00
chr02	irgsp1_rep	mRNA	311537	316458	.	-	.	ID=Os02t0105800-01;Name=Os02t0105800-01;Locus_id=Os02g0105800;Note=Cyclin-like F-box domain containing protein.;Transcript_evidence=AK102217 (DDBJ, Best hit);ORF_evidence=B8AGX0 (UniProt);KEGG=Os02t0105800-01;NIAS_FLcDNA=J033087L07;PGFD=Os02t0105800-01
chr02	irgsp1_rep	five_prime_UTR	316296	316458	.	-	.	Parent=Os02t0105800-01
chr02	irgsp1_rep	CDS	316148	316295	.	-	.	Parent=Os02t0105800-01
chr02	irgsp1_rep	CDS	314722	314819	.	-	.	Parent=Os02t0105800-01
chr02	irgsp1_rep	CDS	312458	313255	.	-	.	Parent=Os02t0105800-01
chr02	irgsp1_rep	CDS	312220	312372	.	-	.	Parent=Os02t0105800-01
chr02	irgsp1_rep	CDS	311752	312138	.	-	.	Parent=Os02t0105800-01
chr02	irgsp1_rep	three_prime_UTR	311537	311751	.	-	.	Parent=Os02t0105800-01
chr02	irgsp1_rep	mRNA	316837	319120	.	-	.	ID=Os02t0105900-01;Name=Os02t0105900-01;Locus_id=Os02g0105900;Note=Similar to 40S ribosomal protein S4.;Transcript_evidence=AK103949 (DDBJ, Best hit),AK061776 (DDBJ, Best hit),AK102423 (DDBJ, Best hit);ORF_evidence=P49398 (UniProt);InterPro=Ribosomal protein S4e (IPR000876),RNA-binding S4 (IPR002942),KOW (IPR005824),Ribosomal protein S4e, N-terminal (IPR013843),Ribosomal protein S4e, central (IPR013845),Ribosomal protein S4e, N-terminal, conserved site (IPR018199);GO=Biological Process: translation (GO:0006412),Cellular Component: intracellular (GO:0005622),Cellular Component: ribosome (GO:0005840),Molecular Function: RNA binding (GO:0003723),Molecular Function: structural constituent of ribosome (GO:0003735);KEGG=Os02t0105900-01;NIAS_FLcDNA=001-014-B09,001-039-D06,J033093E13;PGFD=Os02t0105900-01
chr02	irgsp1_rep	five_prime_UTR	319026	319120	.	-	.	Parent=Os02t0105900-01
chr02	irgsp1_rep	CDS	319023	319025	.	-	.	Parent=Os02t0105900-01
chr02	irgsp1_rep	CDS	318122	318199	.	-	.	Parent=Os02t0105900-01
chr02	irgsp1_rep	CDS	317837	318017	.	-	.	Parent=Os02t0105900-01
chr02	irgsp1_rep	CDS	317647	317744	.	-	.	Parent=Os02t0105900-01
chr02	irgsp1_rep	CDS	316960	317397	.	-	.	Parent=Os02t0105900-01
chr02	irgsp1_rep	three_prime_UTR	316837	316959	.	-	.	Parent=Os02t0105900-01
chr02	irgsp1_rep	mRNA	316819	319099	.	+	.	ID=Os02t0106001-00;Name=Os02t0106001-00;Locus_id=Os02g0106001;Note=Conserved hypothetical protein.;Transcript_evidence=BT017558 (DDBJ);ORF_evidence=NP_001170255.1 (RefSeq)
chr02	irgsp1_rep	five_prime_UTR	316819	317011	.	+	.	Parent=Os02t0106001-00
chr02	irgsp1_rep	CDS	317012	317314	.	+	.	Parent=Os02t0106001-00
chr02	irgsp1_rep	three_prime_UTR	317315	317399	.	+	.	Parent=Os02t0106001-00
chr02	irgsp1_rep	three_prime_UTR	317652	318022	.	+	.	Parent=Os02t0106001-00
chr02	irgsp1_rep	three_prime_UTR	318127	318210	.	+	.	Parent=Os02t0106001-00
chr02	irgsp1_rep	three_prime_UTR	319035	319099	.	+	.	Parent=Os02t0106001-00
chr02	irgsp1_rep	mRNA	343057	346875	.	+	.	ID=Os02t0106100-01;Name=Os02t0106100-01;Locus_id=Os02g0106100;Note=Similar to Fructosyltransferase.;Transcript_evidence=AK072245 (DDBJ, Best hit);ORF_evidence=Q9LKI9 (UniProt);InterPro=Glycoside hydrolase, family 32 (IPR001362),Concanavalin A-like lectin/glucanase (IPR008985),Glycosyl hydrolases family 32, N-terminal (IPR013148),Glycosyl hydrolase family 32, C-terminal (IPR013189),Glycoside hydrolase, family 32, active site (IPR018053),Beta-fructofuranosidase (IPR021792),Glycosyl hydrolase family 43, five-bladed beta-propellor domain (IPR023296);GO=Biological Process: carbohydrate metabolic process (GO:0005975),Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553),Molecular Function: beta-fructofuranosidase activity (GO:0004564),Molecular Function: sucrose alpha-glucosidase activity (GO:0004575);KEGG=Os02t0106100-01 (EC:3.2.1.26);NIAS_FLcDNA=J023002K22;PGFD=Os02t0106100-01;IDCGP=Os02t0106100-01
chr02	irgsp1_rep	five_prime_UTR	343057	343153	.	+	.	Parent=Os02t0106100-01
chr02	irgsp1_rep	CDS	343154	343580	.	+	.	Parent=Os02t0106100-01
chr02	irgsp1_rep	CDS	343956	344827	.	+	.	Parent=Os02t0106100-01
chr02	irgsp1_rep	CDS	345830	346519	.	+	.	Parent=Os02t0106100-01
chr02	irgsp1_rep	three_prime_UTR	346520	346875	.	+	.	Parent=Os02t0106100-01
chr02	irgsp1_rep	mRNA	343383	346491	.	-	.	ID=Os02t0106201-00;Name=Os02t0106201-00;Locus_id=Os02g0106201;Note=Hypothetical protein.;Transcript_evidence=tplb0027b15 (Wheat FLcDNA);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	345940	346491	.	-	.	Parent=Os02t0106201-00
chr02	irgsp1_rep	CDS	345844	345939	.	-	.	Parent=Os02t0106201-00
chr02	irgsp1_rep	CDS	343938	344842	.	-	.	Parent=Os02t0106201-00
chr02	irgsp1_rep	CDS	343383	343560	.	-	.	Parent=Os02t0106201-00
chr02	irgsp1_rep	mRNA	350795	354294	.	-	.	ID=Os02t0106300-01;Name=Os02t0106300-01;Locus_id=Os02g0106300;Note=Pentatricopeptide repeat domain containing protein.;Transcript_evidence=AK110347 (DDBJ, Best hit);ORF_evidence=A2WZV4 (UniProt);InterPro=Calponin homology domain (IPR001715),Pentatricopeptide repeat (IPR002885),Tetratricopeptide-like helical (IPR011990);GO=Molecular Function: binding (GO:0005488),Molecular Function: protein binding (GO:0005515);KEGG=Os02t0106300-01;NIAS_FLcDNA=002-164-G08;PGFD=Os02t0106300-01
chr02	irgsp1_rep	five_prime_UTR	354273	354294	.	-	.	Parent=Os02t0106300-01
chr02	irgsp1_rep	CDS	352017	354272	.	-	.	Parent=Os02t0106300-01
chr02	irgsp1_rep	three_prime_UTR	351825	352016	.	-	.	Parent=Os02t0106300-01
chr02	irgsp1_rep	three_prime_UTR	351540	351723	.	-	.	Parent=Os02t0106300-01
chr02	irgsp1_rep	three_prime_UTR	350795	351133	.	-	.	Parent=Os02t0106300-01
chr02	irgsp1_rep	mRNA	385998	386946	.	-	.	ID=Os02t0106600-01;Name=Os02t0106600-01;Locus_id=Os02g0106600;Note=Zinc finger, RING/FYVE/PHD-type domain containing protein.;Transcript_evidence=AK107830 (DDBJ, Best hit);ORF_evidence=NP_001152282.1 (RefSeq);InterPro=Zinc finger, RING-type (IPR001841),Zinc finger, RING/FYVE/PHD-type (IPR013083),Zinc finger, RING-H2-type (IPR024766);GO=Molecular Function: protein binding (GO:0005515),Molecular Function: zinc ion binding (GO:0008270);KEGG=Os02t0106600-01;NIAS_FLcDNA=002-133-G11;PGFD=Os02t0106600-01;IDCGP=Os02t0106600-01
chr02	irgsp1_rep	five_prime_UTR	386865	386946	.	-	.	Parent=Os02t0106600-01
chr02	irgsp1_rep	CDS	386298	386864	.	-	.	Parent=Os02t0106600-01
chr02	irgsp1_rep	three_prime_UTR	385998	386297	.	-	.	Parent=Os02t0106600-01
chr02	irgsp1_rep	mRNA	391819	395616	.	+	.	ID=Os02t0106700-01;Name=Os02t0106700-01;Locus_id=Os02g0106700;Note=Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 domain containing protein.;Transcript_evidence=AK073056 (DDBJ, Best hit);ORF_evidence=NP_001130919.1 (RefSeq);InterPro=Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2 (IPR012462);NIAS_FLcDNA=J033020O16
chr02	irgsp1_rep	five_prime_UTR	391819	391879	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	CDS	391880	392148	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	CDS	392296	392395	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	CDS	392604	393400	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	CDS	393520	393634	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	CDS	393831	393926	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	CDS	394008	394091	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	three_prime_UTR	394092	394098	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	three_prime_UTR	394366	395616	.	+	.	Parent=Os02t0106700-01
chr02	irgsp1_rep	mRNA	397365	403411	.	+	.	ID=Os02t0106800-01;Name=Os02t0106800-01;Locus_id=Os02g0106800;Note=TMPIT-like family protein.;Transcript_evidence=AK060675 (DDBJ, Best hit);ORF_evidence=B8AGX3 (UniProt);InterPro=TMPIT-like (IPR012926);GO=Cellular Component: integral to membrane (GO:0016021);KEGG=Os02t0106800-01;NIAS_FLcDNA=001-029-A04;PGFD=Os02t0106800-01;IDCGP=Os02t0106800-01
chr02	irgsp1_rep	five_prime_UTR	397365	397405	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	397406	397609	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	398483	398561	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	398648	398742	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	399289	399393	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	399496	399575	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	399832	399922	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	400021	400128	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	400529	400615	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	400862	400927	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	CDS	403039	403188	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	three_prime_UTR	403189	403411	.	+	.	Parent=Os02t0106800-01
chr02	irgsp1_rep	mRNA	404250	406672	.	-	.	ID=Os02t0106900-01;Name=Os02t0106900-01;Locus_id=Os02g0106900;Note=Protein kinase, core domain containing protein.;Transcript_evidence=AK099892 (DDBJ, Best hit);ORF_evidence=NP_001148054.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Tyrosine-protein kinase, active site (IPR008266),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os02t0106900-01;NIAS_FLcDNA=J013113C03;PGFD=Os02t0106900-01;IDCGP=Os02t0106900-01
chr02	irgsp1_rep	five_prime_UTR	406619	406672	.	-	.	Parent=Os02t0106900-01
chr02	irgsp1_rep	CDS	406087	406618	.	-	.	Parent=Os02t0106900-01
chr02	irgsp1_rep	CDS	404464	405152	.	-	.	Parent=Os02t0106900-01
chr02	irgsp1_rep	three_prime_UTR	404250	404463	.	-	.	Parent=Os02t0106900-01
chr02	irgsp1_rep	mRNA	406058	406216	.	+	.	ID=Os02t0106933-00;Name=Os02t0106933-00;Locus_id=Os02g0106933;Note=Non-protein coding transcript.;Transcript_evidence=BT087207 (DDBJ);ORF_evidence=NONE
chr02	irgsp1_rep	exon	406058	406216	.	+	.	Parent=Os02t0106933-00
chr02	irgsp1_rep	mRNA	410645	411491	.	+	.	ID=Os02t0106966-00;Name=Os02t0106966-00;Locus_id=Os02g0106966;Note=Similar to emb1507 (embryo defective 1507)%3B ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding / nucleoside-triphosphatase/ nucleotide binding.;Transcript_evidence=AK376310 (DDBJ);ORF_evidence=NP_173520.1 (RefSeq)
chr02	irgsp1_rep	five_prime_UTR	410645	410660	.	+	.	Parent=Os02t0106966-00
chr02	irgsp1_rep	CDS	410661	411491	.	+	.	Parent=Os02t0106966-00
chr02	irgsp1_rep	mRNA	416973	418387	.	+	.	ID=Os02t0107000-01;Name=Os02t0107000-01;Locus_id=Os02g0107000;Note=Sec63 domain domain containing protein.;Transcript_evidence=AK059539 (DDBJ, Best hit);ORF_evidence=B9F1R2 (UniProt);InterPro=Sec63 domain (IPR004179);NIAS_FLcDNA=001-029-E06
chr02	irgsp1_rep	five_prime_UTR	416973	416974	.	+	.	Parent=Os02t0107000-01
chr02	irgsp1_rep	CDS	416975	418153	.	+	.	Parent=Os02t0107000-01
chr02	irgsp1_rep	three_prime_UTR	418154	418387	.	+	.	Parent=Os02t0107000-01
chr02	irgsp1_rep	mRNA	422507	424238	.	+	.	ID=Os02t0107200-01;Name=Os02t0107200-01;Locus_id=Os02g0107200;Note=Similar to diphosphomevalonate decarboxylase.;Transcript_evidence=AK241754 (DDBJ, Best hit);ORF_evidence=B6TCA9 (UniProt);InterPro=Diphosphomevalonate decarboxylase (IPR005935),GHMP kinase (IPR006204),Ribosomal protein S5 domain 2-type fold, subgroup (IPR014721),Ribosomal protein S5 domain 2-type fold (IPR020568);GO=Biological Process: isoprenoid biosynthetic process (GO:0008299),Biological Process: phosphorylation (GO:0016310),Molecular Function: diphosphomevalonate decarboxylase activity (GO:0004163),Molecular Function: ATP binding (GO:0005524),Molecular Function: kinase activity (GO:0016301);KEGG=Os02t0107200-01 (EC:4.1.1.33);NIAS_FLcDNA=J065204B19;PGFD=Os02t0107200-01;IDCGP=Os02t0107200-01
chr02	irgsp1_rep	five_prime_UTR	422507	422597	.	+	.	Parent=Os02t0107200-01
chr02	irgsp1_rep	five_prime_UTR	422680	422693	.	+	.	Parent=Os02t0107200-01
chr02	irgsp1_rep	CDS	422694	422912	.	+	.	Parent=Os02t0107200-01
chr02	irgsp1_rep	CDS	423357	423555	.	+	.	Parent=Os02t0107200-01
chr02	irgsp1_rep	CDS	423737	423800	.	+	.	Parent=Os02t0107200-01
chr02	irgsp1_rep	CDS	423894	423978	.	+	.	Parent=Os02t0107200-01
chr02	irgsp1_rep	three_prime_UTR	423979	424238	.	+	.	Parent=Os02t0107200-01
chr02	irgsp1_rep	mRNA	424941	426159	.	-	.	ID=Os02t0107251-01;Name=Os02t0107251-01;Locus_id=Os02g0107251;Note=Conserved hypothetical protein.;Transcript_evidence=AK288063 (DDBJ, Best hit);ORF_evidence=Q7EXZ7 (UniProt);NIAS_FLcDNA=J075155C04
chr02	irgsp1_rep	five_prime_UTR	426045	426159	.	-	.	Parent=Os02t0107251-01
chr02	irgsp1_rep	CDS	425058	426044	.	-	.	Parent=Os02t0107251-01
chr02	irgsp1_rep	three_prime_UTR	424941	425057	.	-	.	Parent=Os02t0107251-01
chr02	irgsp1_rep	mRNA	425109	426481	.	+	.	ID=Os02t0107300-01;Name=Os02t0107300-01;Locus_id=Os02g0107300;Note=Conserved hypothetical protein.;Transcript_evidence=AK060506 (DDBJ, Best hit);ORF_evidence=Q6ZG21 (UniProt);KEGG=Os02t0107300-01;NIAS_FLcDNA=001-019-A02;PGFD=Os02t0107300-01
chr02	irgsp1_rep	five_prime_UTR	425109	425464	.	+	.	Parent=Os02t0107300-01
chr02	irgsp1_rep	CDS	425465	425926	.	+	.	Parent=Os02t0107300-01
chr02	irgsp1_rep	three_prime_UTR	425927	426481	.	+	.	Parent=Os02t0107300-01
chr02	irgsp1_rep	mRNA	426505	426768	-2.3226	+	.	ID=Os02t0107350-00;Name=Os02t0107350-00;Locus_id=Os02g0107350;Note=Conserved hypothetical protein.;Transcript_evidence=ab initio prediction;ORF_evidence=B8AGX4 (UniProt)
chr02	irgsp1_rep	CDS	426505	426768	-2.3226	+	0	Parent=Os02t0107350-00
chr02	irgsp1_rep	mRNA	434565	436081	.	-	.	ID=Os02t0107600-01;Name=Os02t0107600-01;Locus_id=Os02g0107600;Note=Protein of unknown function DUF1677, Oryza sativa family protein.;Transcript_evidence=AK067983 (DDBJ, Best hit),AK102128 (DDBJ, Best hit);ORF_evidence=A2WZW3 (UniProt);InterPro=Protein of unknown function DUF1677, Oryza sativa (IPR012871);KEGG=Os02t0107600-01;NIAS_FLcDNA=J013124E14,J033084P16;PGFD=Os02t0107600-01;IDCGP=Os02t0107600-01
chr02	irgsp1_rep	five_prime_UTR	435880	436081	.	-	.	Parent=Os02t0107600-01
chr02	irgsp1_rep	CDS	434731	435879	.	-	.	Parent=Os02t0107600-01
chr02	irgsp1_rep	three_prime_UTR	434565	434730	.	-	.	Parent=Os02t0107600-01
chr02	irgsp1_rep	mRNA	449100	449841	-0.515806	-	.	ID=Os02t0107800-00;Name=Os02t0107800-00;Locus_id=Os02g0107800;Note=Conserved hypothetical protein.;Transcript_evidence=ab initio prediction;ORF_evidence=Q6ETT6 (UniProt)
chr02	irgsp1_rep	CDS	449664	449841	-1.00553	-	0	Parent=Os02t0107800-00
chr02	irgsp1_rep	CDS	449100	449278	-2.35969	-	2	Parent=Os02t0107800-00
chr02	irgsp1_rep	mRNA	451471	453156	-0.747189	-	.	ID=Os02t0107900-00;Name=Os02t0107900-00;Locus_id=Os02g0107900;Note=Similar to ABC transporter family, cholesterol/phospholipid flippase.;Transcript_evidence=ab initio prediction;ORF_evidence=XP_002318606.1 (RefSeq);InterPro=ABC transporter-like (IPR003439);GO=Molecular Function: ATP binding (GO:0005524),Molecular Function: ATPase activity (GO:0016887);KEGG=Os02t0107900-00
chr02	irgsp1_rep	CDS	453095	453156	-3.89401	-	0	Parent=Os02t0107900-00
chr02	irgsp1_rep	CDS	452886	452970	-2.03523	-	1	Parent=Os02t0107900-00
chr02	irgsp1_rep	CDS	452214	452342	-2.03523	-	0	Parent=Os02t0107900-00
chr02	irgsp1_rep	CDS	452028	452133	-2.03523	-	0	Parent=Os02t0107900-00
chr02	irgsp1_rep	CDS	451825	451913	-2.03523	-	2	Parent=Os02t0107900-00
chr02	irgsp1_rep	CDS	451471	451725	-2.04628	-	0	Parent=Os02t0107900-00
chr02	irgsp1_rep	mRNA	458781	459988	.	-	.	ID=Os02t0108000-01;Name=Os02t0108000-01;Locus_id=Os02g0108000;Note=Hypothetical protein.;Transcript_evidence=AK065886 (DDBJ, Best hit);ORF_evidence=longestORF;NIAS_FLcDNA=J013043M07
chr02	irgsp1_rep	five_prime_UTR	459443	459988	.	-	.	Parent=Os02t0108000-01
chr02	irgsp1_rep	CDS	458987	459442	.	-	.	Parent=Os02t0108000-01
chr02	irgsp1_rep	three_prime_UTR	458781	458986	.	-	.	Parent=Os02t0108000-01
chr02	irgsp1_rep	mRNA	458901	460810	.	+	.	ID=Os02t0108100-01;Name=Os02t0108100-01;Locus_id=Os02g0108100;Note=Conserved hypothetical protein.;Transcript_evidence=AK106287 (DDBJ, Best hit);ORF_evidence=Q10LY3 (UniProt);KEGG=Os02t0108100-01;NIAS_FLcDNA=002-101-A11
chr02	irgsp1_rep	five_prime_UTR	458901	458914	.	+	.	Parent=Os02t0108100-01
chr02	irgsp1_rep	CDS	458915	460087	.	+	.	Parent=Os02t0108100-01
chr02	irgsp1_rep	three_prime_UTR	460088	460810	.	+	.	Parent=Os02t0108100-01
chr02	irgsp1_rep	mRNA	482360	483874	.	-	.	ID=Os02t0108302-01;Name=Os02t0108302-01;Locus_id=Os02g0108302;Note=Hypothetical gene.;Transcript_evidence=AK241203 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os02t0108302-01;NIAS_FLcDNA=J065122D12
chr02	irgsp1_rep	five_prime_UTR	483387	483874	.	-	.	Parent=Os02t0108302-01
chr02	irgsp1_rep	CDS	483045	483386	.	-	.	Parent=Os02t0108302-01
chr02	irgsp1_rep	three_prime_UTR	482593	483044	.	-	.	Parent=Os02t0108302-01
chr02	irgsp1_rep	three_prime_UTR	482360	482501	.	-	.	Parent=Os02t0108302-01
chr02	irgsp1_rep	mRNA	482598	483761	-2.73456	+	.	ID=Os02t0108400-00;Name=Os02t0108400-00;Locus_id=Os02g0108400;Note=Protein of unknown function DUF1677, Oryza sativa family protein.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001045638.1 (RefSeq);InterPro=Protein of unknown function DUF1677, Oryza sativa (IPR012871);KEGG=Os02t0108400-00;PGFD=Os02t0108400-00;IDCGP=Os02t0108400-00
chr02	irgsp1_rep	CDS	482598	483761	-2.73456	+	0	Parent=Os02t0108400-00
chr02	irgsp1_rep	mRNA	484413	485397	.	-	.	ID=Os02t0108500-01;Name=Os02t0108500-01;Locus_id=Os02g0108500;Note=Non-protein coding transcript.;Transcript_evidence=AK063089 (DDBJ, Best hit);ORF_evidence=NONE;NIAS_FLcDNA=001-111-A11
chr02	irgsp1_rep	exon	484413	485397	.	-	.	Parent=Os02t0108500-01
chr02	irgsp1_rep	mRNA	487231	487548	-1.58949	+	.	ID=Os02t0108700-00;Name=Os02t0108700-00;Locus_id=Os02g0108700;Note=Similar to predicted protein.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_173520.1 (RefSeq);InterPro=Sec63 domain (IPR004179);KEGG=Os02t0108700-00 (EC:3.6.1.-);PGFD=Os02t0108700-00
chr02	irgsp1_rep	CDS	487231	487548	-1.58949	+	0	Parent=Os02t0108700-00
chr02	irgsp1_rep	mRNA	488913	490611	.	+	.	ID=Os02t0108800-01;Name=Os02t0108800-01;Locus_id=Os02g0108800;Note=Cytochrome P450 domain containing protein.;Transcript_evidence=AK099951 (DDBJ, Best hit);ORF_evidence=A2WZY4 (UniProt);InterPro=Cytochrome P450 (IPR001128),Cytochrome P450, E-class, group I (IPR002401),Cytochrome P450, conserved site (IPR017972);GO=Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: iron ion binding (GO:0005506),Molecular Function: electron carrier activity (GO:0009055),Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705),Molecular Function: heme binding (GO:0020037);NIAS_FLcDNA=J013123G02
chr02	irgsp1_rep	five_prime_UTR	488913	488942	.	+	.	Parent=Os02t0108800-01
chr02	irgsp1_rep	CDS	488943	490457	.	+	.	Parent=Os02t0108800-01
chr02	irgsp1_rep	three_prime_UTR	490458	490611	.	+	.	Parent=Os02t0108800-01
chr02	irgsp1_rep	mRNA	491452	492594	-1.98506	+	.	ID=Os02t0108900-00;Name=Os02t0108900-00;Locus_id=Os02g0108900;Note=Protein of unknown function DUF1677, Oryza sativa family protein.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001172772.1 (RefSeq);InterPro=Protein of unknown function DUF1677, Oryza sativa (IPR012871);KEGG=Os02t0108900-00;PGFD=Os02t0108900-00;IDCGP=Os02t0108900-00
chr02	irgsp1_rep	CDS	491452	492594	-1.98506	+	0	Parent=Os02t0108900-00
chr02	irgsp1_rep	mRNA	496768	500351	.	-	.	ID=Os02t0109100-01;Name=Os02t0109100-01;Locus_id=Os02g0109100;Note=Similar to diphosphomevalonate decarboxylase.;Transcript_evidence=AK243049 (DDBJ, Best hit);ORF_evidence=B6TCA9 (UniProt);InterPro=Diphosphomevalonate decarboxylase (IPR005935),GHMP kinase (IPR006204),Ribosomal protein S5 domain 2-type fold, subgroup (IPR014721),Ribosomal protein S5 domain 2-type fold (IPR020568);GO=Biological Process: isoprenoid biosynthetic process (GO:0008299),Biological Process: phosphorylation (GO:0016310),Molecular Function: diphosphomevalonate decarboxylase activity (GO:0004163),Molecular Function: ATP binding (GO:0005524),Molecular Function: kinase activity (GO:0016301);KEGG=Os02t0109100-01 (EC:4.1.1.33);NIAS_FLcDNA=J100010I02;PGFD=Os02t0109100-01;IDCGP=Os02t0109100-01
chr02	irgsp1_rep	five_prime_UTR	500232	500351	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	five_prime_UTR	500135	500148	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	499916	500134	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	499246	499444	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	498994	499057	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	498838	498901	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	498660	498740	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	498368	498454	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	498054	498211	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	497918	497966	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	497231	497352	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	CDS	496936	497158	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	three_prime_UTR	496768	496935	.	-	.	Parent=Os02t0109100-01
chr02	irgsp1_rep	mRNA	502493	504146	.	-	.	ID=Os02t0109200-01;Name=Os02t0109200-01;Locus_id=Os02g0109200;Note=Protein of unknown function DUF793 family protein.;Transcript_evidence=AK108815 (DDBJ, Best hit);ORF_evidence=B8AG56 (UniProt);InterPro=Protein BYPASS-related (IPR008511);KEGG=Os02t0109200-01;NIAS_FLcDNA=002-151-E05;PGFD=Os02t0109200-01
chr02	irgsp1_rep	five_prime_UTR	504039	504146	.	-	.	Parent=Os02t0109200-01
chr02	irgsp1_rep	CDS	502785	504038	.	-	.	Parent=Os02t0109200-01
chr02	irgsp1_rep	three_prime_UTR	502493	502784	.	-	.	Parent=Os02t0109200-01
chr02	irgsp1_rep	mRNA	500469	503078	.	-	.	ID=Os02t0109200-02;Name=Os02t0109200-02;Locus_id=Os02g0109200;Note=Protein of unknown function DUF793 family protein.;Transcript_evidence=AK120727 (DDBJ, Best hit);ORF_evidence=Q6ETS7 (UniProt);InterPro=Protein BYPASS-related (IPR008511);KEGG=Os02t0109200-02;NIAS_FLcDNA=J023002P17;PGFD=Os02t0109200-02
chr02	irgsp1_rep	CDS	502785	503078	.	-	.	Parent=Os02t0109200-02
chr02	irgsp1_rep	three_prime_UTR	500469	502784	.	-	.	Parent=Os02t0109200-02
chr02	irgsp1_rep	mRNA	509377	512956	-0.711112	-	.	ID=Os02t0109400-00;Name=Os02t0109400-00;Locus_id=Os02g0109400;Note=Transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein.;Transcript_evidence=ab initio prediction;ORF_evidence=B9F1R8 (UniProt);InterPro=Transcription factor jumonji/aspartyl beta-hydroxylase (IPR003347),Transcription factor jumonji (IPR013129);GO=Molecular Function: protein binding (GO:0005515)
chr02	irgsp1_rep	CDS	512942	512956	-5.94219	-	0	Parent=Os02t0109400-00
chr02	irgsp1_rep	CDS	510996	511718	-2.03523	-	0	Parent=Os02t0109400-00
chr02	irgsp1_rep	CDS	510843	510915	-2.03523	-	0	Parent=Os02t0109400-00
chr02	irgsp1_rep	CDS	510684	510769	-2.03523	-	2	Parent=Os02t0109400-00
chr02	irgsp1_rep	CDS	510420	510539	-2.03523	-	0	Parent=Os02t0109400-00
chr02	irgsp1_rep	CDS	510200	510270	-2.03523	-	0	Parent=Os02t0109400-00
chr02	irgsp1_rep	CDS	509377	509425	-2.06247	-	1	Parent=Os02t0109400-00
chr02	irgsp1_rep	mRNA	513740	517148	-0.66658	-	.	ID=Os02t0109501-00;Name=Os02t0109501-00;Locus_id=Os02g0109501;Note=Hypothetical conserved gene.;Transcript_evidence=ab initio prediction;ORF_evidence=B8AG57 (UniProt);KEGG=Os02t0109501-00;PGFD=Os02t0109501-00
chr02	irgsp1_rep	CDS	517083	517148	-1.99442	-	0	Parent=Os02t0109501-00
chr02	irgsp1_rep	CDS	516428	516478	-2.03523	-	0	Parent=Os02t0109501-00
chr02	irgsp1_rep	CDS	516195	516341	-2.03523	-	0	Parent=Os02t0109501-00
chr02	irgsp1_rep	CDS	515952	516088	-2.03523	-	0	Parent=Os02t0109501-00
chr02	irgsp1_rep	CDS	515702	515801	-2.03523	-	1	Parent=Os02t0109501-00
chr02	irgsp1_rep	CDS	515477	515609	-2.03523	-	0	Parent=Os02t0109501-00
chr02	irgsp1_rep	CDS	515336	515399	-2.03523	-	2	Parent=Os02t0109501-00
chr02	irgsp1_rep	CDS	514494	515250	-1.20972	-	1	Parent=Os02t0109501-00
chr02	irgsp1_rep	CDS	513740	514081	-1.29798	-	0	Parent=Os02t0109501-00
chr02	irgsp1_rep	mRNA	534963	538203	.	-	.	ID=Os02t0109800-01;Name=Os02t0109800-01;Locus_id=Os02g0109800;Note=Tetratricopeptide-like helical domain containing protein.;Transcript_evidence=AK069014 (DDBJ, Best hit);ORF_evidence=B6SKU4 (UniProt);InterPro=Tetratricopeptide-like helical (IPR011990),Tetratricopeptide repeat-containing (IPR013026),Tetratricopeptide TPR2 (IPR013105),Tetratricopeptide repeat (IPR019734);GO=Molecular Function: binding (GO:0005488),Molecular Function: protein binding (GO:0005515);KEGG=Os02t0109800-01;NIAS_FLcDNA=J013170A02;PGFD=Os02t0109800-01;IDCGP=Os02t0109800-01
chr02	irgsp1_rep	five_prime_UTR	538159	538203	.	-	.	Parent=Os02t0109800-01
chr02	irgsp1_rep	CDS	537503	538158	.	-	.	Parent=Os02t0109800-01
chr02	irgsp1_rep	CDS	536318	537226	.	-	.	Parent=Os02t0109800-01
chr02	irgsp1_rep	CDS	535275	535509	.	-	.	Parent=Os02t0109800-01
chr02	irgsp1_rep	three_prime_UTR	534963	535274	.	-	.	Parent=Os02t0109800-01
chr02	irgsp1_rep	mRNA	540110	547449	.	+	.	ID=Os02t0109900-01;Name=Os02t0109900-01;Locus_id=Os02g0109900;Note=Hypothetical conserved gene.;Transcript_evidence=AK287671 (DDBJ, Best hit);ORF_evidence=Q6Z900 (UniProt);KEGG=Os02t0109900-01;NIAS_FLcDNA=J065120M01;PGFD=Os02t0109900-01
chr02	irgsp1_rep	five_prime_UTR	540110	540181	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	CDS	540182	540583	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	CDS	541266	541475	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	CDS	541557	542018	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	CDS	542112	542222	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	CDS	542309	542488	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	CDS	543083	543367	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	CDS	544581	544701	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	CDS	544802	544923	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	three_prime_UTR	544924	544928	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	three_prime_UTR	545285	545563	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	three_prime_UTR	547154	547449	.	+	.	Parent=Os02t0109900-01
chr02	irgsp1_rep	mRNA	545700	548055	.	-	.	ID=Os02t0110000-01;Name=Os02t0110000-01;Locus_id=Os02g0110000;Note=Lipase, GDSL domain containing protein.;Transcript_evidence=AK106946 (DDBJ, Best hit);ORF_evidence=B8AG69 (UniProt);InterPro=Lipase, GDSL (IPR001087);GO=Biological Process: lipid metabolic process (GO:0006629),Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788);KEGG=Os02t0110000-01;NIAS_FLcDNA=002-119-D11;PGFD=Os02t0110000-01
chr02	irgsp1_rep	five_prime_UTR	548009	548055	.	-	.	Parent=Os02t0110000-01
chr02	irgsp1_rep	CDS	547453	548008	.	-	.	Parent=Os02t0110000-01
chr02	irgsp1_rep	CDS	547165	547295	.	-	.	Parent=Os02t0110000-01
chr02	irgsp1_rep	CDS	546635	546865	.	-	.	Parent=Os02t0110000-01
chr02	irgsp1_rep	CDS	546314	546566	.	-	.	Parent=Os02t0110000-01
chr02	irgsp1_rep	CDS	546033	546223	.	-	.	Parent=Os02t0110000-01
chr02	irgsp1_rep	three_prime_UTR	545700	546032	.	-	.	Parent=Os02t0110000-01
chr02	irgsp1_rep	mRNA	554511	556079	.	-	.	ID=Os02t0110101-00;Name=Os02t0110101-00;Locus_id=Os02g0110101;Note=Hypothetical gene.;Transcript_evidence=EU972984 (DDBJ);ORF_evidence=longestORF;KEGG=Os02t0110101-00
chr02	irgsp1_rep	five_prime_UTR	556005	556079	.	-	.	Parent=Os02t0110101-00
chr02	irgsp1_rep	CDS	555399	556004	.	-	.	Parent=Os02t0110101-00
chr02	irgsp1_rep	three_prime_UTR	554511	555398	.	-	.	Parent=Os02t0110101-00
chr02	irgsp1_rep	mRNA	554579	556320	.	+	.	ID=Os02t0110200-01;Name=Os02t0110200-01;Locus_id=Os02g0110200;Note=Similar to Hydroperoxide lyase.;Transcript_evidence=AK105694 (DDBJ, Best hit);ORF_evidence=Q7X9C2 (UniProt);InterPro=Cytochrome P450 (IPR001128),Cytochrome P450, E-class, group IV (IPR002403);GO=Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: monooxygenase activity (GO:0004497),Molecular Function: iron ion binding (GO:0005506),Molecular Function: electron carrier activity (GO:0009055),Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705),Molecular Function: heme binding (GO:0020037);KEGG=Os02t0110200-01 (EC:4.1.2.-);NIAS_FLcDNA=001-201-C08;PGFD=Os02t0110200-01;IDCGP=Os02t0110200-01
chr02	irgsp1_rep	five_prime_UTR	554579	554634	.	+	.	Parent=Os02t0110200-01
chr02	irgsp1_rep	CDS	554635	556098	.	+	.	Parent=Os02t0110200-01
chr02	irgsp1_rep	three_prime_UTR	556099	556320	.	+	.	Parent=Os02t0110200-01
chr02	irgsp1_rep	mRNA	554637	556281	.	+	.	ID=Os02t0110200-02;Name=Os02t0110200-02;Locus_id=Os02g0110200;Note=Similar to Hydroperoxide lyase.;Transcript_evidence=AK100012 (DDBJ, Best hit);ORF_evidence=Q7X9C2 (UniProt);InterPro=Cytochrome P450 (IPR001128),Cytochrome P450, E-class, group IV (IPR002403);GO=Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: monooxygenase activity (GO:0004497),Molecular Function: iron ion binding (GO:0005506),Molecular Function: electron carrier activity (GO:0009055),Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705),Molecular Function: heme binding (GO:0020037);KEGG=Os02t0110200-02 (EC:4.1.2.-);NIAS_FLcDNA=J013140G07;PGFD=Os02t0110200-02
chr02	irgsp1_rep	five_prime_UTR	554637	554637	.	+	.	Parent=Os02t0110200-02
chr02	irgsp1_rep	CDS	554638	556098	.	+	.	Parent=Os02t0110200-02
chr02	irgsp1_rep	three_prime_UTR	556099	556281	.	+	.	Parent=Os02t0110200-02
chr02	irgsp1_rep	mRNA	558906	559965	-0.733672	+	.	ID=Os02t0110300-00;Name=Os02t0110300-00;Locus_id=Os02g0110300;Note=Conserved hypothetical protein.;Transcript_evidence=ab initio prediction;ORF_evidence=Q6Z8Z6 (UniProt)
chr02	irgsp1_rep	CDS	558906	558962	-1.77148	+	0	Parent=Os02t0110300-00
chr02	irgsp1_rep	CDS	559139	559209	-4.94806	+	0	Parent=Os02t0110300-00
chr02	irgsp1_rep	CDS	559644	559965	-2.04628	+	1	Parent=Os02t0110300-00
chr02	irgsp1_rep	mRNA	561897	564428	.	-	.	ID=Os02t0110400-01;Name=Os02t0110400-01;Locus_id=Os02g0110400;Note=Sugar transporter, conserved site domain containing protein.;Transcript_evidence=AK073200 (DDBJ, Best hit);ORF_evidence=B5RHT1 (UniProt);InterPro=Pentatricopeptide repeat (IPR002885),Tetratricopeptide-like helical (IPR011990);GO=Molecular Function: binding (GO:0005488);KEGG=Os02t0110400-01;NIAS_FLcDNA=J033023K10;PGFD=Os02t0110400-01
chr02	irgsp1_rep	five_prime_UTR	564407	564428	.	-	.	Parent=Os02t0110400-01
chr02	irgsp1_rep	CDS	562163	564406	.	-	.	Parent=Os02t0110400-01
chr02	irgsp1_rep	three_prime_UTR	561897	562162	.	-	.	Parent=Os02t0110400-01
chr02	irgsp1_rep	mRNA	564717	565953	.	-	.	ID=Os02t0110500-01;Name=Os02t0110500-01;Locus_id=Os02g0110500;Note=Conserved hypothetical protein.;Transcript_evidence=AK063061 (DDBJ, Best hit);ORF_evidence=A3A2C2 (UniProt);KEGG=Os02t0110500-01;NIAS_FLcDNA=001-110-F10
chr02	irgsp1_rep	five_prime_UTR	565917	565953	.	-	.	Parent=Os02t0110500-01
chr02	irgsp1_rep	CDS	565602	565916	.	-	.	Parent=Os02t0110500-01
chr02	irgsp1_rep	three_prime_UTR	565463	565601	.	-	.	Parent=Os02t0110500-01
chr02	irgsp1_rep	three_prime_UTR	565164	565384	.	-	.	Parent=Os02t0110500-01
chr02	irgsp1_rep	three_prime_UTR	564717	565075	.	-	.	Parent=Os02t0110500-01
chr02	irgsp1_rep	mRNA	566089	572447	.	-	.	ID=Os02t0110600-01;Name=Os02t0110600-01;Locus_id=Os02g0110600;Note=Similar to protein kinase.;Transcript_evidence=AK061840 (DDBJ, Best hit);ORF_evidence=NP_001152055.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os02t0110600-01 (EC:2.7.11.1);NIAS_FLcDNA=001-040-E02;PGFD=Os02t0110600-01
chr02	irgsp1_rep	five_prime_UTR	572349	572447	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	five_prime_UTR	568490	568542	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	CDS	568420	568489	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	CDS	568173	568298	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	CDS	567981	568097	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	CDS	567623	567880	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	CDS	567223	567464	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	CDS	566641	567127	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	CDS	566552	566579	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	CDS	566434	566521	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	three_prime_UTR	566089	566433	.	-	.	Parent=Os02t0110600-01
chr02	irgsp1_rep	mRNA	566089	572430	.	-	.	ID=Os02t0110600-02;Name=Os02t0110600-02;Locus_id=Os02g0110600;Note=Similar to protein kinase.;Transcript_evidence=AK069727 (DDBJ, Best hit);ORF_evidence=NP_001152055.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);NIAS_FLcDNA=J023027K11
chr02	irgsp1_rep	five_prime_UTR	572370	572430	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	CDS	572349	572369	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	CDS	568420	568492	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	CDS	568173	568298	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	CDS	567981	568100	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	CDS	567623	567880	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	CDS	567223	567464	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	CDS	566201	567127	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	three_prime_UTR	566089	566200	.	-	.	Parent=Os02t0110600-02
chr02	irgsp1_rep	mRNA	566089	569267	.	-	.	ID=Os02t0110600-03;Name=Os02t0110600-03;Locus_id=Os02g0110600;Note=Similar to protein kinase.;Transcript_evidence=AK099755 (DDBJ, Best hit);ORF_evidence=NP_001152055.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);NIAS_FLcDNA=J013093A22
chr02	irgsp1_rep	five_prime_UTR	568897	569267	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	five_prime_UTR	568490	568542	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	CDS	568420	568489	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	CDS	568173	568298	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	CDS	567981	568097	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	CDS	567623	567880	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	CDS	567223	567464	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	CDS	566201	567127	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	three_prime_UTR	566089	566200	.	-	.	Parent=Os02t0110600-03
chr02	irgsp1_rep	mRNA	571882	573253	.	+	.	ID=Os02t0110650-01;Name=Os02t0110650-01;Locus_id=Os02g0110650;Note=Hypothetical gene.;Transcript_evidence=AK288654 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os02t0110650-01;NIAS_FLcDNA=J090057B03
chr02	irgsp1_rep	five_prime_UTR	571882	572584	.	+	.	Parent=Os02t0110650-01
chr02	irgsp1_rep	CDS	572585	572935	.	+	.	Parent=Os02t0110650-01
chr02	irgsp1_rep	three_prime_UTR	572936	573253	.	+	.	Parent=Os02t0110650-01
chr02	irgsp1_rep	mRNA	573376	575525	.	-	.	ID=Os02t0110700-01;Name=Os02t0110700-01;Locus_id=Os02g0110700;Note=Conserved hypothetical protein.;Transcript_evidence=AK058383 (DDBJ, Best hit);ORF_evidence=B9F1S4 (UniProt);NIAS_FLcDNA=001-014-H09
chr02	irgsp1_rep	five_prime_UTR	575525	575525	.	-	.	Parent=Os02t0110700-01
chr02	irgsp1_rep	CDS	574997	575524	.	-	.	Parent=Os02t0110700-01
chr02	irgsp1_rep	CDS	574705	574900	.	-	.	Parent=Os02t0110700-01
chr02	irgsp1_rep	CDS	573638	574305	.	-	.	Parent=Os02t0110700-01
chr02	irgsp1_rep	three_prime_UTR	573376	573637	.	-	.	Parent=Os02t0110700-01
chr02	irgsp1_rep	mRNA	573103	574170	.	-	.	ID=Os02t0110700-02;Name=Os02t0110700-02;Locus_id=Os02g0110700;Note=Hypothetical conserved gene.;Transcript_evidence=AK061065 (DDBJ, Best hit);ORF_evidence=B9F1S4 (UniProt);KEGG=Os02t0110700-02;NIAS_FLcDNA=006-206-B09
chr02	irgsp1_rep	five_prime_UTR	574169	574170	.	-	.	Parent=Os02t0110700-02
chr02	irgsp1_rep	CDS	573638	574168	.	-	.	Parent=Os02t0110700-02
chr02	irgsp1_rep	three_prime_UTR	573103	573637	.	-	.	Parent=Os02t0110700-02
chr02	irgsp1_rep	mRNA	596645	609187	.	+	.	ID=Os02t0110900-00;Name=Os02t0110900-00;Locus_id=Os02g0110900;Note=Hypothetical conserved gene.;Transcript_evidence=CU405847 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os02t0110900-00
chr02	irgsp1_rep	five_prime_UTR	596645	596645	.	+	.	Parent=Os02t0110900-00
chr02	irgsp1_rep	CDS	596646	596892	.	+	.	Parent=Os02t0110900-00
chr02	irgsp1_rep	CDS	597004	597076	.	+	.	Parent=Os02t0110900-00
chr02	irgsp1_rep	CDS	608837	608879	.	+	.	Parent=Os02t0110900-00
chr02	irgsp1_rep	three_prime_UTR	608880	609187	.	+	.	Parent=Os02t0110900-00
chr02	irgsp1_rep	mRNA	626299	630711	.	+	.	ID=Os02t0111500-01;Name=Os02t0111500-01;Locus_id=Os02g0111500;Note=Hypothetical gene.;Transcript_evidence=AK119503 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os02t0111500-01;NIAS_FLcDNA=001-134-E11
chr02	irgsp1_rep	five_prime_UTR	626299	626381	.	+	.	Parent=Os02t0111500-01
chr02	irgsp1_rep	five_prime_UTR	629392	630372	.	+	.	Parent=Os02t0111500-01
chr02	irgsp1_rep	CDS	630373	630597	.	+	.	Parent=Os02t0111500-01
chr02	irgsp1_rep	three_prime_UTR	630598	630711	.	+	.	Parent=Os02t0111500-01
chr02	irgsp1_rep	mRNA	627685	630534	.	-	.	ID=Os02t0111600-01;Name=Os02t0111600-01;Locus_id=Os02g0111600;Note=Serine/threonine protein kinase-related domain containing protein.;Transcript_evidence=AK100387 (DDBJ, Best hit);ORF_evidence=Q4U3Z6 (UniProt);InterPro=EGF-type aspartate/asparagine hydroxylation site (IPR000152),Protein kinase, catalytic domain (IPR000719),EGF-like calcium-binding (IPR001881),Epidermal growth factor-like (IPR006210),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442),EGF-like calcium-binding, conserved site (IPR018097);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: calcium ion binding (GO:0005509),Molecular Function: protein binding (GO:0005515),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os02t0111600-01;NIAS_FLcDNA=J023085M03;PGFD=Os02t0111600-01
chr02	irgsp1_rep	five_prime_UTR	630495	630534	.	-	.	Parent=Os02t0111600-01
chr02	irgsp1_rep	CDS	629612	630494	.	-	.	Parent=Os02t0111600-01
chr02	irgsp1_rep	CDS	629339	629509	.	-	.	Parent=Os02t0111600-01
chr02	irgsp1_rep	CDS	627825	628984	.	-	.	Parent=Os02t0111600-01
chr02	irgsp1_rep	three_prime_UTR	627685	627824	.	-	.	Parent=Os02t0111600-01
chr02	irgsp1_rep	mRNA	633586	635778	.	+	.	ID=Os02t0111700-01;Name=Os02t0111700-01;Locus_id=Os02g0111700;Note=Similar to 60S ribosomal protein L37-A (L37-1).;Transcript_evidence=AK058280 (DDBJ, Best hit);ORF_evidence=A2X009 (UniProt);InterPro=Ribosomal protein L37e (IPR001569),Ribosomal protein L37ae/L37e, N-terminal (IPR011331),Ribosomal protein, zinc-binding domain (IPR011332),Ribosomal protein L37e, conserved site (IPR018267);GO=Biological Process: translation (GO:0006412),Cellular Component: intracellular (GO:0005622),Cellular Component: ribosome (GO:0005840),Molecular Function: structural constituent of ribosome (GO:0003735);KEGG=Os02t0111700-01;NIAS_FLcDNA=001-013-C10;PGFD=Os02t0111700-01;IDCGP=Os02t0111700-01
chr02	irgsp1_rep	five_prime_UTR	633586	633641	.	+	.	Parent=Os02t0111700-01
chr02	irgsp1_rep	CDS	633642	633644	.	+	.	Parent=Os02t0111700-01
chr02	irgsp1_rep	CDS	633728	633863	.	+	.	Parent=Os02t0111700-01
chr02	irgsp1_rep	CDS	635356	635457	.	+	.	Parent=Os02t0111700-01
chr02	irgsp1_rep	CDS	635565	635608	.	+	.	Parent=Os02t0111700-01
chr02	irgsp1_rep	three_prime_UTR	635609	635778	.	+	.	Parent=Os02t0111700-01
chr02	irgsp1_rep	mRNA	637013	640452	.	-	.	ID=Os02t0111800-02;Name=Os02t0111800-02;Locus_id=Os02g0111800;Note=Protein kinase, core domain containing protein.;Transcript_evidence=AK110271 (DDBJ, Best hit),AK111191 (DDBJ, Best hit);ORF_evidence=A2X010 (UniProt);KEGG=Os02t0111800-02;NIAS_FLcDNA=002-163-C10,002-178-B07;PGFD=Os02t0111800-02
chr02	irgsp1_rep	five_prime_UTR	640264	640452	.	-	.	Parent=Os02t0111800-02
chr02	irgsp1_rep	CDS	637141	640263	.	-	.	Parent=Os02t0111800-02
chr02	irgsp1_rep	three_prime_UTR	637013	637140	.	-	.	Parent=Os02t0111800-02
chr02	irgsp1_rep	mRNA	646112	649305	.	+	.	ID=Os02t0111900-01;Name=Os02t0111900-01;Locus_id=Os02g0111900;Note=DEAD-like helicase, N-terminal domain containing protein.;Transcript_evidence=AK119353 (DDBJ, Best hit);ORF_evidence=A2X011 (UniProt);InterPro=Helicase, C-terminal (IPR001650),DNA/RNA helicase, DEAD/DEAH box type, N-terminal (IPR011545),DEAD-like helicase (IPR014001),DEAD/DEAH-box helicase, putative (IPR018973);GO=Molecular Function: nucleic acid binding (GO:0003676),Molecular Function: helicase activity (GO:0004386),Molecular Function: ATP binding (GO:0005524),Molecular Function: ATP-dependent helicase activity (GO:0008026);KEGG=Os02t0111900-01;NIAS_FLcDNA=001-131-F05;PGFD=Os02t0111900-01
chr02	irgsp1_rep	five_prime_UTR	646112	646298	.	+	.	Parent=Os02t0111900-01
chr02	irgsp1_rep	CDS	646299	649082	.	+	.	Parent=Os02t0111900-01
chr02	irgsp1_rep	three_prime_UTR	649083	649305	.	+	.	Parent=Os02t0111900-01
chr02	irgsp1_rep	mRNA	650638	651300	.	-	.	ID=Os02t0112000-00;Name=Os02t0112000-00;Locus_id=Os02g0112000;Note=Hypothetical protein.;Transcript_evidence=AK370830 (DDBJ);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	651278	651300	.	-	.	Parent=Os02t0112000-00
chr02	irgsp1_rep	CDS	651125	651277	.	-	.	Parent=Os02t0112000-00
chr02	irgsp1_rep	CDS	650829	650984	.	-	.	Parent=Os02t0112000-00
chr02	irgsp1_rep	CDS	650694	650702	.	-	.	Parent=Os02t0112000-00
chr02	irgsp1_rep	three_prime_UTR	650638	650693	.	-	.	Parent=Os02t0112000-00
chr02	irgsp1_rep	mRNA	655324	657243	.	+	.	ID=Os02t0112100-00;Name=Os02t0112100-00;Locus_id=Os02g0112100;Note=Similar to BCH2.;Transcript_evidence=AB008519 (DDBJ, Best hit);ORF_evidence=NP_001105195.1 (RefSeq);InterPro=Major facilitator superfamily (IPR011701),Major facilitator superfamily domain, general substrate transporter (IPR016196);GO=Biological Process: transmembrane transport (GO:0055085),Cellular Component: integral to membrane (GO:0016021);KEGG=Os02t0112100-00;Oryzabase=6247;CGSNL Gene Symbol=NRT2.1;CGSNL Gene Name=HIGH AFFINITY NITRATE TRANSPORTER;CGSNL Gene Symbol Synonym(s)=OsNRT2.1;CGSNL Gene Name Synonym(s)=high-affinity nitrate transporter 2.1;PGFD=Os02t0112100-00
chr02	irgsp1_rep	five_prime_UTR	655324	655419	.	+	.	Parent=Os02t0112100-00
chr02	irgsp1_rep	CDS	655420	657021	.	+	.	Parent=Os02t0112100-00
chr02	irgsp1_rep	three_prime_UTR	657022	657243	.	+	.	Parent=Os02t0112100-00
chr02	irgsp1_rep	mRNA	667264	669053	.	-	.	ID=Os02t0112600-01;Name=Os02t0112600-01;Locus_id=Os02g0112600;Note=Similar to BCH2.;Transcript_evidence=AK109733 (DDBJ, Best hit);ORF_evidence=O82138 (UniProt);InterPro=Major facilitator superfamily (IPR011701),Major facilitator superfamily domain, general substrate transporter (IPR016196);GO=Biological Process: transmembrane transport (GO:0055085),Cellular Component: integral to membrane (GO:0016021);KEGG=Os02t0112600-01;NIAS_FLcDNA=002-146-C04;Oryzabase=6248;CGSNL Gene Symbol=NRT2.2;CGSNL Gene Name=HIGH AFFINITY NITRATE TRANSPORTER;CGSNL Gene Symbol Synonym(s)=OsNRT2.2;CGSNL Gene Name Synonym(s)=high-affinity nitrate transporter 2.2;PGFD=Os02t0112600-01
chr02	irgsp1_rep	five_prime_UTR	668963	669053	.	-	.	Parent=Os02t0112600-01
chr02	irgsp1_rep	CDS	667361	668962	.	-	.	Parent=Os02t0112600-01
chr02	irgsp1_rep	three_prime_UTR	667264	667360	.	-	.	Parent=Os02t0112600-01
chr02	irgsp1_rep	mRNA	679468	697321	.	-	.	ID=Os02t0112900-00;Name=Os02t0112900-00;Locus_id=Os02g0112900;Note=Similar to Viroid RNA-binding protein (Fragment).;Transcript_evidence=AF324485 (DDBJ, Best hit);ORF_evidence=Q01K11 (UniProt);InterPro=Aminotransferase class-III (IPR005814),Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (IPR015421),Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (IPR015422),Pyridoxal phosphate-dependent transferase, major domain (IPR015424);GO=Molecular Function: catalytic activity (GO:0003824),Molecular Function: transaminase activity (GO:0008483),Molecular Function: pyridoxal phosphate binding (GO:0030170);KEGG=Os02t0112900-00;PGFD=Os02t0112900-00
chr02	irgsp1_rep	five_prime_UTR	697302	697321	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	697216	697301	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	696982	697066	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	695241	695313	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	687203	687300	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	686936	687028	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	685118	685191	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	684551	684589	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	684347	684435	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	684197	684273	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	684044	684118	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	683351	683398	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	683023	683106	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	682846	682933	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	682638	682716	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	682446	682539	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	682241	682319	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	679775	679890	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	CDS	679597	679671	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	three_prime_UTR	679468	679596	.	-	.	Parent=Os02t0112900-00
chr02	irgsp1_rep	mRNA	712586	715144	.	+	.	ID=Os02t0113200-00;Name=Os02t0113200-00;Locus_id=Os02g0113200;Note=Similar to Cytochrome P450-like protein.;Transcript_evidence=DQ680853 (DDBJ);ORF_evidence=Q84YE6 (UniProt);InterPro=Cytochrome P450 (IPR001128),Cytochrome P450, E-class, group IV (IPR002403),Cytochrome P450, conserved site (IPR017972);GO=Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: monooxygenase activity (GO:0004497),Molecular Function: iron ion binding (GO:0005506),Molecular Function: electron carrier activity (GO:0009055),Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705),Molecular Function: heme binding (GO:0020037)
chr02	irgsp1_rep	CDS	712586	713035	.	+	.	Parent=Os02t0113200-00
chr02	irgsp1_rep	CDS	714120	715121	.	+	.	Parent=Os02t0113200-00
chr02	irgsp1_rep	three_prime_UTR	715122	715144	.	+	.	Parent=Os02t0113200-00
chr02	irgsp1_rep	mRNA	717857	719511	-0.761455	+	.	ID=Os02t0113300-00;Name=Os02t0113300-00;Locus_id=Os02g0113300;Note=Domain of unknown function DUF1618 domain containing protein.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001045662.1 (RefSeq);InterPro=Domain of unknown function DUF1618 (IPR011676)
chr02	irgsp1_rep	CDS	717857	719252	-0.400409	+	0	Parent=Os02t0113300-00
chr02	irgsp1_rep	CDS	719453	719511	-5.57212	+	2	Parent=Os02t0113300-00
chr02	irgsp1_rep	mRNA	726578	734044	.	+	.	ID=Os02t0113400-01;Name=Os02t0113400-01;Locus_id=Os02g0113400;Note=Protein of unknown function DUF544 family protein.;Transcript_evidence=AK069550 (DDBJ, Best hit);ORF_evidence=B8AGH2 (UniProt);KEGG=Os02t0113400-01;NIAS_FLcDNA=J023024B12;PGFD=Os02t0113400-01
chr02	irgsp1_rep	five_prime_UTR	726578	726749	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	CDS	726750	727105	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	CDS	727899	728048	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	CDS	728510	728635	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	CDS	728726	729482	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	CDS	729573	729697	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	CDS	729776	729815	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	three_prime_UTR	729816	729818	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	three_prime_UTR	733358	734044	.	+	.	Parent=Os02t0113400-01
chr02	irgsp1_rep	mRNA	743366	745313	.	+	.	ID=Os02t0113800-01;Name=Os02t0113800-01;Locus_id=Os02g0113800;Note=Domain of unknown function DUF1618 domain containing protein.;Transcript_evidence=AK072590 (DDBJ, Best hit);ORF_evidence=A2X022 (UniProt);InterPro=Domain of unknown function DUF1618 (IPR011676);KEGG=Os02t0113800-01;NIAS_FLcDNA=J023131L22;PGFD=Os02t0113800-01;IDCGP=Os02t0113800-01
chr02	irgsp1_rep	five_prime_UTR	743366	743466	.	+	.	Parent=Os02t0113800-01
chr02	irgsp1_rep	CDS	743467	744868	.	+	.	Parent=Os02t0113800-01
chr02	irgsp1_rep	CDS	745066	745127	.	+	.	Parent=Os02t0113800-01
chr02	irgsp1_rep	three_prime_UTR	745128	745313	.	+	.	Parent=Os02t0113800-01
chr02	irgsp1_rep	mRNA	745924	748174	-0.952151	+	.	ID=Os02t0113900-00;Name=Os02t0113900-00;Locus_id=Os02g0113900;Note=Domain of unknown function DUF1618 domain containing protein.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001172774.1 (RefSeq);InterPro=Domain of unknown function DUF1618 (IPR011676)
chr02	irgsp1_rep	CDS	745924	746262	-1.97335	+	0	Parent=Os02t0113900-00
chr02	irgsp1_rep	CDS	746497	747343	-2.16522	+	0	Parent=Os02t0113900-00
chr02	irgsp1_rep	CDS	748077	748174	-2.46451	+	2	Parent=Os02t0113900-00
chr02	irgsp1_rep	mRNA	748721	752339	.	-	.	ID=Os02t0114000-01;Name=Os02t0114000-01;Locus_id=Os02g0114000;Note=Bromodomain domain containing protein.;Transcript_evidence=AK240714 (DDBJ, Best hit);ORF_evidence=Q6Z7C5 (UniProt);InterPro=Bromodomain (IPR001487);GO=Molecular Function: protein binding (GO:0005515);NIAS_FLcDNA=J043022H07
chr02	irgsp1_rep	CDS	752025	752339	.	-	.	Parent=Os02t0114000-01
chr02	irgsp1_rep	CDS	751380	751889	.	-	.	Parent=Os02t0114000-01
chr02	irgsp1_rep	CDS	750123	750371	.	-	.	Parent=Os02t0114000-01
chr02	irgsp1_rep	CDS	749122	749799	.	-	.	Parent=Os02t0114000-01
chr02	irgsp1_rep	three_prime_UTR	748721	749121	.	-	.	Parent=Os02t0114000-01
chr02	irgsp1_rep	mRNA	755937	759433	.	-	.	ID=Os02t0114033-00;Name=Os02t0114033-00;Locus_id=Os02g0114033;Note=Glutamine-Leucine-Glutamine, QLQ domain containing protein.;Transcript_evidence=tplb0057e06 (Wheat FLcDNA);ORF_evidence=Q6Z7C5 (UniProt);InterPro=Glutamine-Leucine-Glutamine, QLQ (IPR014978);GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355),Cellular Component: nucleus (GO:0005634),Molecular Function: ATP binding (GO:0005524),Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016818)
chr02	irgsp1_rep	five_prime_UTR	759162	759433	.	-	.	Parent=Os02t0114033-00
chr02	irgsp1_rep	CDS	757398	758672	.	-	.	Parent=Os02t0114033-00
chr02	irgsp1_rep	CDS	755937	757259	.	-	.	Parent=Os02t0114033-00
chr02	irgsp1_rep	mRNA	759110	759589	.	+	.	ID=Os02t0114066-00;Name=Os02t0114066-00;Locus_id=Os02g0114066;Note=Non-protein coding transcript.;Transcript_evidence=EU948018 (DDBJ);ORF_evidence=NONE
chr02	irgsp1_rep	exon	759110	759589	.	+	.	Parent=Os02t0114066-00
chr02	irgsp1_rep	mRNA	763409	765119	.	-	.	ID=Os02t0114100-00;Name=Os02t0114100-00;Locus_id=Os02g0114100;Note=Protein of unknown function DUF6, transmembrane domain containing protein.;Transcript_evidence=EU961623 (DDBJ);ORF_evidence=NP_001150116.1 (RefSeq);InterPro=Drug/metabolite transporter (IPR000620);GO=Cellular Component: membrane (GO:0016020);PGFD=Os02t0114100-00
chr02	irgsp1_rep	five_prime_UTR	765024	765119	.	-	.	Parent=Os02t0114100-00
chr02	irgsp1_rep	CDS	764809	765023	.	-	.	Parent=Os02t0114100-00
chr02	irgsp1_rep	CDS	763980	764717	.	-	.	Parent=Os02t0114100-00
chr02	irgsp1_rep	CDS	763409	763616	.	-	.	Parent=Os02t0114100-00
chr02	irgsp1_rep	mRNA	763935	766016	.	+	.	ID=Os02t0114150-01;Name=Os02t0114150-01;Locus_id=Os02g0114150;Note=Hypothetical gene.;Transcript_evidence=AK106679 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os02t0114150-01;NIAS_FLcDNA=002-114-B01
chr02	irgsp1_rep	five_prime_UTR	763935	763936	.	+	.	Parent=Os02t0114150-01
chr02	irgsp1_rep	CDS	763937	764248	.	+	.	Parent=Os02t0114150-01
chr02	irgsp1_rep	three_prime_UTR	764249	766016	.	+	.	Parent=Os02t0114150-01
chr02	irgsp1_rep	mRNA	767270	772098	.	-	.	ID=Os02t0114200-01;Name=Os02t0114200-01;Locus_id=Os02g0114200;Note=Serine carboxypeptidase III precursor (EC 3.4.16.5).;Transcript_evidence=AK073508 (DDBJ, Best hit),AK061078 (DDBJ, Best hit);ORF_evidence=P37891 (UniProt);NIAS_FLcDNA=J033044O22,006-206-E09;PGFD=Os02t0114200-01
chr02	irgsp1_rep	five_prime_UTR	772088	772098	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	771789	772087	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	771490	771658	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	770611	770730	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	769860	770003	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	769624	769774	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	769315	769403	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	768971	769229	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	768025	768158	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	CDS	767490	767627	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	three_prime_UTR	767270	767489	.	-	.	Parent=Os02t0114200-01
chr02	irgsp1_rep	mRNA	767270	769083	.	-	.	ID=Os02t0114200-02;Name=Os02t0114200-02;Locus_id=Os02g0114200;Note=Similar to Serine carboxypeptidase 3.;Transcript_evidence=AK103982 (DDBJ, Best hit);ORF_evidence=P37891 (UniProt);InterPro=Peptidase S10, serine carboxypeptidase (IPR001563),Peptidase S10, serine carboxypeptidase, active site (IPR018202);GO=Biological Process: proteolysis (GO:0006508),Molecular Function: serine-type carboxypeptidase activity (GO:0004185);KEGG=Os02t0114200-02 (EC:3.4.16.5);NIAS_FLcDNA=001-017-D06;PGFD=Os02t0114200-02
chr02	irgsp1_rep	five_prime_UTR	769083	769083	.	-	.	Parent=Os02t0114200-02
chr02	irgsp1_rep	CDS	768971	769082	.	-	.	Parent=Os02t0114200-02
chr02	irgsp1_rep	CDS	768025	768158	.	-	.	Parent=Os02t0114200-02
chr02	irgsp1_rep	CDS	767490	767627	.	-	.	Parent=Os02t0114200-02
chr02	irgsp1_rep	three_prime_UTR	767270	767489	.	-	.	Parent=Os02t0114200-02
chr02	irgsp1_rep	mRNA	775715	776637	.	+	.	ID=Os02t0114300-00;Name=Os02t0114300-00;Locus_id=Os02g0114300;Note=Hypothetical protein.;Transcript_evidence=AK366781 (DDBJ);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	775715	776169	.	+	.	Parent=Os02t0114300-00
chr02	irgsp1_rep	CDS	776170	776412	.	+	.	Parent=Os02t0114300-00
chr02	irgsp1_rep	three_prime_UTR	776413	776637	.	+	.	Parent=Os02t0114300-00
chr02	irgsp1_rep	mRNA	777582	778268	-1.2173	-	.	ID=Os02t0114400-00;Name=Os02t0114400-00;Locus_id=Os02g0114400;Note=Similar to glycerol-3-phosphate acyltransferase 8.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001147442.1 (RefSeq)
chr02	irgsp1_rep	CDS	777582	778268	-1.2173	-	0	Parent=Os02t0114400-00
chr02	irgsp1_rep	mRNA	780669	785676	.	-	.	ID=Os02t0114600-01;Name=Os02t0114600-01;Locus_id=Os02g0114600;Note=Kelch-type beta propeller domain containing protein.;Transcript_evidence=AK062579 (DDBJ, Best hit);ORF_evidence=Q6Z7B9 (UniProt);InterPro=F-box domain, cyclin-like (IPR001810),Kelch repeat type 1 (IPR006652),Galactose oxidase, beta-propeller (IPR015916),F-box domain, Skp2-like (IPR022364);GO=Molecular Function: protein binding (GO:0005515);KEGG=Os02t0114600-01;NIAS_FLcDNA=001-047-H08;PGFD=Os02t0114600-01;IDCGP=Os02t0114600-01
chr02	irgsp1_rep	five_prime_UTR	785498	785676	.	-	.	Parent=Os02t0114600-01
chr02	irgsp1_rep	five_prime_UTR	782172	782179	.	-	.	Parent=Os02t0114600-01
chr02	irgsp1_rep	CDS	781684	782171	.	-	.	Parent=Os02t0114600-01
chr02	irgsp1_rep	CDS	780984	781578	.	-	.	Parent=Os02t0114600-01
chr02	irgsp1_rep	three_prime_UTR	780669	780983	.	-	.	Parent=Os02t0114600-01
chr02	irgsp1_rep	mRNA	780728	785217	.	-	.	ID=Os02t0114600-02;Name=Os02t0114600-02;Locus_id=Os02g0114600;Note=Kelch-type beta propeller domain containing protein.;Transcript_evidence=AK073957 (DDBJ, Best hit);ORF_evidence=Q6Z7B9 (UniProt);InterPro=F-box domain, cyclin-like (IPR001810),Kelch repeat type 1 (IPR006652),Galactose oxidase, beta-propeller (IPR015916),F-box domain, Skp2-like (IPR022364);GO=Molecular Function: protein binding (GO:0005515);KEGG=Os02t0114600-02;NIAS_FLcDNA=J033076O03;PGFD=Os02t0114600-02
chr02	irgsp1_rep	five_prime_UTR	784945	785217	.	-	.	Parent=Os02t0114600-02
chr02	irgsp1_rep	five_prime_UTR	782172	782179	.	-	.	Parent=Os02t0114600-02
chr02	irgsp1_rep	CDS	781684	782171	.	-	.	Parent=Os02t0114600-02
chr02	irgsp1_rep	CDS	780984	781578	.	-	.	Parent=Os02t0114600-02
chr02	irgsp1_rep	three_prime_UTR	780728	780983	.	-	.	Parent=Os02t0114600-02
chr02	irgsp1_rep	mRNA	785945	789191	.	+	.	ID=Os02t0114700-01;Name=Os02t0114700-01;Locus_id=Os02g0114700;Note=Similar to Phosphorylation regulatory protein HP-10.;Transcript_evidence=AK102050 (DDBJ, Best hit);ORF_evidence=A2X031 (UniProt);InterPro=Nucleotide binding protein, PINc (IPR006596),Nin one binding (NOB1) Zn-ribbon-like (IPR014881),D-site 20S pre-rRNA nuclease (IPR017117);KEGG=Os02t0114700-01;NIAS_FLcDNA=J033082B02;PGFD=Os02t0114700-01;IDCGP=Os02t0114700-01
chr02	irgsp1_rep	five_prime_UTR	785945	785992	.	+	.	Parent=Os02t0114700-01
chr02	irgsp1_rep	CDS	785993	786359	.	+	.	Parent=Os02t0114700-01
chr02	irgsp1_rep	CDS	786773	787703	.	+	.	Parent=Os02t0114700-01
chr02	irgsp1_rep	CDS	787807	787975	.	+	.	Parent=Os02t0114700-01
chr02	irgsp1_rep	CDS	788472	788588	.	+	.	Parent=Os02t0114700-01
chr02	irgsp1_rep	CDS	788815	788961	.	+	.	Parent=Os02t0114700-01
chr02	irgsp1_rep	three_prime_UTR	788962	789191	.	+	.	Parent=Os02t0114700-01
chr02	irgsp1_rep	mRNA	789597	790139	-1.98506	-	.	ID=Os02t0114800-00;Name=Os02t0114800-00;Locus_id=Os02g0114800;Note=Conserved hypothetical protein.;Transcript_evidence=ab initio prediction;ORF_evidence=NP_001045671.1 (RefSeq)
chr02	irgsp1_rep	CDS	789597	790139	-1.98506	-	0	Parent=Os02t0114800-00
chr02	irgsp1_rep	mRNA	794820	795082	.	-	.	ID=Os02t0114900-00;Name=Os02t0114900-00;Locus_id=Os02g0114900;Note=Non-protein coding transcript.;Transcript_evidence=CT835316 (DDBJ, Best hit);ORF_evidence=NONE
chr02	irgsp1_rep	exon	794820	795082	.	-	.	Parent=Os02t0114900-00
chr02	irgsp1_rep	mRNA	818981	824539	.	+	.	ID=Os02t0115600-01;Name=Os02t0115600-01;Locus_id=Os02g0115600;Note=S1, RNA binding domain containing protein.;Transcript_evidence=AK067366 (DDBJ, Best hit);ORF_evidence=XP_002451381.1 (RefSeq);InterPro=Ribosomal protein S1, RNA-binding domain (IPR003029),Nucleic acid-binding, OB-fold (IPR012340),Nucleic acid-binding, OB-fold-like (IPR016027),RNA-binding domain, S1 (IPR022967);GO=Molecular Function: RNA binding (GO:0003723);KEGG=Os02t0115600-01;NIAS_FLcDNA=J013106A17;PGFD=Os02t0115600-01
chr02	irgsp1_rep	five_prime_UTR	818981	819021	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	819022	819264	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	819996	820761	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	820846	820920	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	820995	821112	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	821328	821445	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	821644	821742	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	821835	822134	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	822211	822318	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	822443	822514	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	822580	822666	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	822887	822958	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	823063	823152	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	823795	823902	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	824015	824083	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	CDS	824177	824251	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	three_prime_UTR	824252	824539	.	+	.	Parent=Os02t0115600-01
chr02	irgsp1_rep	mRNA	820696	824520	.	+	.	ID=Os02t0115600-02;Name=Os02t0115600-02;Locus_id=Os02g0115600;Note=Nucleic acid-binding, OB-fold-like domain containing protein.;Transcript_evidence=AK105772 (DDBJ, Best hit);ORF_evidence=XP_002451381.1 (RefSeq);InterPro=Ribosomal protein S1, RNA-binding domain (IPR003029),Nucleic acid-binding, OB-fold (IPR012340),Nucleic acid-binding, OB-fold-like (IPR016027),RNA-binding domain, S1 (IPR022967);GO=Molecular Function: RNA binding (GO:0003723);KEGG=Os02t0115600-02;NIAS_FLcDNA=001-202-E12
chr02	irgsp1_rep	five_prime_UTR	820696	820697	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	820698	820761	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	820846	820920	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	820995	821112	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	821328	821445	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	821644	821742	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	821835	822134	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	822211	822318	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	822443	822514	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	822580	822666	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	822887	822958	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	823063	823152	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	823795	823902	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	824015	824083	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	CDS	824177	824251	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	three_prime_UTR	824252	824520	.	+	.	Parent=Os02t0115600-02
chr02	irgsp1_rep	mRNA	819009	824265	.	-	.	ID=Os02t0115650-00;Name=Os02t0115650-00;Locus_id=Os02g0115650;Note=Hypothetical protein.;Transcript_evidence=tplb0039m17 (Wheat FLcDNA);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	824175	824265	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	824028	824081	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	823793	823909	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	823061	823150	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	822884	822956	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	822578	822663	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	822437	822512	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	822211	822312	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	821834	822134	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	821642	821741	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	821321	821443	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	820971	821105	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	five_prime_UTR	820178	820707	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	CDS	820000	820177	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	CDS	819009	819269	.	-	.	Parent=Os02t0115650-00
chr02	irgsp1_rep	mRNA	825046	827640	.	-	.	ID=Os02t0115700-01;Name=Os02t0115700-01;Locus_id=Os02g0115700;Note=Catalase isozyme A (EC 1.11.1.6) (CAT-A).;Transcript_evidence=AK065094 (DDBJ, Best hit),AK099231 (DDBJ, Best hit),AK099923 (DDBJ, Best hit);ORF_evidence=B8AGH7 (UniProt);InterPro=Catalase haem-binding site (IPR002226),Catalase-related immune responsive (IPR010582),Catalase, N-terminal (IPR011614),Catalase, mono-functional, haem-containing (IPR018028),Catalase domain (IPR020835),Catalase active site (IPR024708);GO=Biological Process: response to oxidative stress (GO:0006979),Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: catalase activity (GO:0004096),Molecular Function: heme binding (GO:0020037);KEGG=Os02t0115700-01 (EC:1.11.1.6);NIAS_FLcDNA=J013001M08,J013095I04,J013116M08;Oryzabase=8094;CGSNL Gene Symbol=CATA;CGSNL Gene Name=CATALASE A;CGSNL Gene Symbol Synonym(s)=CATA1, Cat A1*, OSCAT-A, Cat2, CatA1, CAT-A, OsCatA;CGSNL Gene Name Synonym(s)=CATALASE A, Catalase-2*, Catalase-Al (cDNA clone), Catalase isozyme A;PGFD=Os02t0115700-01;IDCGP=Os02t0115700-01
chr02	irgsp1_rep	five_prime_UTR	827571	827640	.	-	.	Parent=Os02t0115700-01
chr02	irgsp1_rep	CDS	827556	827570	.	-	.	Parent=Os02t0115700-01
chr02	irgsp1_rep	CDS	826467	827267	.	-	.	Parent=Os02t0115700-01
chr02	irgsp1_rep	CDS	825778	826380	.	-	.	Parent=Os02t0115700-01
chr02	irgsp1_rep	CDS	825369	825428	.	-	.	Parent=Os02t0115700-01
chr02	irgsp1_rep	three_prime_UTR	825046	825368	.	-	.	Parent=Os02t0115700-01
chr02	irgsp1_rep	mRNA	825083	826407	.	-	.	ID=Os02t0115700-02;Name=Os02t0115700-02;Locus_id=Os02g0115700;Note=Similar to Catalase.;Transcript_evidence=AK071061 (DDBJ, Best hit);ORF_evidence=B8AGH7 (UniProt);InterPro=Catalase haem-binding site (IPR002226),Catalase-related immune responsive (IPR010582),Catalase, N-terminal (IPR011614),Catalase, mono-functional, haem-containing (IPR018028),Catalase domain (IPR020835);GO=Biological Process: response to oxidative stress (GO:0006979),Biological Process: oxidation-reduction process (GO:0055114),Molecular Function: catalase activity (GO:0004096),Molecular Function: heme binding (GO:0020037);KEGG=Os02t0115700-02 (EC:1.11.1.6);NIAS_FLcDNA=J023079C18;PGFD=Os02t0115700-02
chr02	irgsp1_rep	five_prime_UTR	826381	826407	.	-	.	Parent=Os02t0115700-02
chr02	irgsp1_rep	CDS	825778	826380	.	-	.	Parent=Os02t0115700-02
chr02	irgsp1_rep	CDS	825369	825428	.	-	.	Parent=Os02t0115700-02
chr02	irgsp1_rep	three_prime_UTR	825083	825368	.	-	.	Parent=Os02t0115700-02
chr02	irgsp1_rep	mRNA	825041	825872	.	-	.	ID=Os02t0115700-03;Name=Os02t0115700-03;Locus_id=Os02g0115700;Note=Similar to Catalase.;Transcript_evidence=AK061923 (DDBJ, Best hit);ORF_evidence=B8AGH7 (UniProt);InterPro=Catalase-related immune responsive (IPR010582);KEGG=Os02t0115700-03 (EC:1.11.1.6);NIAS_FLcDNA=001-042-B11
chr02	irgsp1_rep	five_prime_UTR	825871	825872	.	-	.	Parent=Os02t0115700-03
chr02	irgsp1_rep	CDS	825778	825870	.	-	.	Parent=Os02t0115700-03
chr02	irgsp1_rep	CDS	825369	825428	.	-	.	Parent=Os02t0115700-03
chr02	irgsp1_rep	three_prime_UTR	825041	825368	.	-	.	Parent=Os02t0115700-03
chr02	irgsp1_rep	mRNA	825369	825999	.	+	.	ID=Os02t0115801-00;Name=Os02t0115801-00;Locus_id=Os02g0115801;Note=Hypothetical gene.;Transcript_evidence=AJ234405 (DDBJ);ORF_evidence=longestORF;KEGG=Os02t0115801-00
chr02	irgsp1_rep	CDS	825369	825437	.	+	.	Parent=Os02t0115801-00
chr02	irgsp1_rep	CDS	825787	825999	.	+	.	Parent=Os02t0115801-00
chr02	irgsp1_rep	mRNA	838779	842672	.	-	.	ID=Os02t0115900-01;Name=Os02t0115900-01;Locus_id=Os02g0115900;Note=Endosperm lumenal binding protein.;Transcript_evidence=AK119653 (DDBJ, Best hit);ORF_evidence=O24182 (UniProt);InterPro=Heat shock protein Hsp70 (IPR001023),Heat shock protein 70 (IPR013126),Heat shock protein 70, conserved site (IPR018181);GO=Molecular Function: ATP binding (GO:0005524);KEGG=Os02t0115900-01;NIAS_FLcDNA=002-130-H01;PGFD=Os02t0115900-01
chr02	irgsp1_rep	five_prime_UTR	842526	842672	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	CDS	842477	842525	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	CDS	841489	841756	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	CDS	841189	841403	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	CDS	840855	841097	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	CDS	840078	840557	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	CDS	839828	839982	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	CDS	839638	839720	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	CDS	839048	839552	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	three_prime_UTR	838779	839047	.	-	.	Parent=Os02t0115900-01
chr02	irgsp1_rep	mRNA	838743	842638	.	-	.	ID=Os02t0115900-02;Name=Os02t0115900-02;Locus_id=Os02g0115900;Note=Endosperm lumenal binding protein.;Transcript_evidence=AK065743 (DDBJ, Best hit);ORF_evidence=O24182 (UniProt);InterPro=Heat shock protein Hsp70 (IPR001023),Heat shock protein 70 (IPR013126),Heat shock protein 70, conserved site (IPR018181);GO=Molecular Function: ATP binding (GO:0005524);KEGG=Os02t0115900-02;NIAS_FLcDNA=J013040G16;PGFD=Os02t0115900-02
chr02	irgsp1_rep	five_prime_UTR	842526	842638	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	CDS	842477	842525	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	CDS	841489	841756	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	CDS	841189	841403	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	CDS	840855	841097	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	CDS	840078	840557	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	CDS	839828	839982	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	CDS	839638	839720	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	CDS	839048	839552	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	three_prime_UTR	838743	839047	.	-	.	Parent=Os02t0115900-02
chr02	irgsp1_rep	mRNA	838743	840970	.	-	.	ID=Os02t0115900-03;Name=Os02t0115900-03;Locus_id=Os02g0115900;Note=Similar to Endosperm lumenal binding protein.;Transcript_evidence=AK066006 (DDBJ, Best hit);ORF_evidence=O24182 (UniProt);InterPro=Heat shock protein Hsp70 (IPR001023),Heat shock protein 70 (IPR013126),Heat shock protein 70, conserved site (IPR018181);GO=Molecular Function: ATP binding (GO:0005524);KEGG=Os02t0115900-03;NIAS_FLcDNA=J013044D12;PGFD=Os02t0115900-03
chr02	irgsp1_rep	five_prime_UTR	840970	840970	.	-	.	Parent=Os02t0115900-03
chr02	irgsp1_rep	CDS	840855	840969	.	-	.	Parent=Os02t0115900-03
chr02	irgsp1_rep	CDS	840078	840557	.	-	.	Parent=Os02t0115900-03
chr02	irgsp1_rep	CDS	839828	839982	.	-	.	Parent=Os02t0115900-03
chr02	irgsp1_rep	CDS	839638	839720	.	-	.	Parent=Os02t0115900-03
chr02	irgsp1_rep	CDS	839048	839552	.	-	.	Parent=Os02t0115900-03
chr02	irgsp1_rep	three_prime_UTR	838743	839047	.	-	.	Parent=Os02t0115900-03
chr02	irgsp1_rep	mRNA	839261	841384	.	+	.	ID=Os02t0115950-00;Name=Os02t0115950-00;Locus_id=Os02g0115950;Note=Glutamate dehydrogenase, NAD-specific domain containing protein.;Transcript_evidence=tplb0023b01 (Wheat FLcDNA);ORF_evidence=longestORF;InterPro=Glutamate dehydrogenase, NAD-specific (IPR019651)
chr02	irgsp1_rep	five_prime_UTR	839261	839504	.	+	.	Parent=Os02t0115950-00
chr02	irgsp1_rep	CDS	839505	839546	.	+	.	Parent=Os02t0115950-00
chr02	irgsp1_rep	CDS	839633	839747	.	+	.	Parent=Os02t0115950-00
chr02	irgsp1_rep	CDS	839862	839984	.	+	.	Parent=Os02t0115950-00
chr02	irgsp1_rep	CDS	840092	840549	.	+	.	Parent=Os02t0115950-00
chr02	irgsp1_rep	CDS	840849	840923	.	+	.	Parent=Os02t0115950-00
chr02	irgsp1_rep	three_prime_UTR	840924	841092	.	+	.	Parent=Os02t0115950-00
chr02	irgsp1_rep	three_prime_UTR	841192	841384	.	+	.	Parent=Os02t0115950-00
chr02	irgsp1_rep	mRNA	853795	859876	.	-	.	ID=Os02t0116000-01;Name=Os02t0116000-01;Locus_id=Os02g0116000;Note=Zinc finger, C2H2 domain containing protein.;Transcript_evidence=AK100473 (DDBJ, Best hit);ORF_evidence=A3A2F3 (UniProt);InterPro=Zinc finger, C2H2 (IPR007087),Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087),Zinc finger, C2H2-like (IPR015880);GO=Cellular Component: intracellular (GO:0005622),Molecular Function: nucleic acid binding (GO:0003676),Molecular Function: zinc ion binding (GO:0008270);NIAS_FLcDNA=J023093M20
chr02	irgsp1_rep	five_prime_UTR	859764	859876	.	-	.	Parent=Os02t0116000-01
chr02	irgsp1_rep	CDS	857259	857402	.	-	.	Parent=Os02t0116000-01
chr02	irgsp1_rep	CDS	856825	857031	.	-	.	Parent=Os02t0116000-01
chr02	irgsp1_rep	three_prime_UTR	855926	856824	.	-	.	Parent=Os02t0116000-01
chr02	irgsp1_rep	three_prime_UTR	855036	855697	.	-	.	Parent=Os02t0116000-01
chr02	irgsp1_rep	three_prime_UTR	854658	854893	.	-	.	Parent=Os02t0116000-01
chr02	irgsp1_rep	three_prime_UTR	854399	854542	.	-	.	Parent=Os02t0116000-01
chr02	irgsp1_rep	three_prime_UTR	853795	854302	.	-	.	Parent=Os02t0116000-01
chr02	irgsp1_rep	mRNA	857835	859421	-0.124182	-	.	ID=Os02t0116100-00;Name=Os02t0116100-00;Locus_id=Os02g0116100;Note=Hypothetical conserved gene.;Transcript_evidence=ab initio prediction;ORF_evidence=B9F234 (UniProt);InterPro=Pentatricopeptide repeat (IPR002885),Tetratricopeptide-like helical (IPR011990);GO=Molecular Function: binding (GO:0005488);KEGG=Os02t0116100-00;PGFD=Os02t0116100-00
chr02	irgsp1_rep	CDS	857835	859421	-0.124182	-	0	Parent=Os02t0116100-00
chr02	irgsp1_rep	mRNA	862273	864880	.	+	.	ID=Os02t0116300-01;Name=Os02t0116300-01;Locus_id=Os02g0116300;Note=Similar to Yellow stripe-like transporter 17.;Transcript_evidence=AK070691 (DDBJ, Best hit),AK100087 (DDBJ, Best hit);ORF_evidence=B8A2G4 (UniProt);InterPro=Oligopeptide transporter OPT superfamily (IPR004813);GO=Biological Process: transmembrane transport (GO:0055085);NIAS_FLcDNA=J023058J05,J023003B17
chr02	irgsp1_rep	five_prime_UTR	862273	862385	.	+	.	Parent=Os02t0116300-01
chr02	irgsp1_rep	CDS	862386	862734	.	+	.	Parent=Os02t0116300-01
chr02	irgsp1_rep	CDS	862823	863078	.	+	.	Parent=Os02t0116300-01
chr02	irgsp1_rep	CDS	863177	863311	.	+	.	Parent=Os02t0116300-01
chr02	irgsp1_rep	CDS	863395	864721	.	+	.	Parent=Os02t0116300-01
chr02	irgsp1_rep	three_prime_UTR	864722	864880	.	+	.	Parent=Os02t0116300-01
chr02	irgsp1_rep	mRNA	866007	869292	.	-	.	ID=Os02t0116400-01;Name=Os02t0116400-01;Locus_id=Os02g0116400;Note=Oligopeptide transporter OPT superfamily protein.;Transcript_evidence=AK072347 (DDBJ, Best hit);ORF_evidence=Q2XPY4 (UniProt);InterPro=Oligopeptide transporter OPT superfamily (IPR004813);GO=Biological Process: transmembrane transport (GO:0055085);KEGG=Os02t0116400-01;NIAS_FLcDNA=J023054D10;Oryzabase=8366;CGSNL Gene Symbol=YSL8;CGSNL Gene Name=YELLOW STRIP-LIKE GENE 8;CGSNL Gene Symbol Synonym(s)=OsYSL8;CGSNL Gene Name Synonym(s)=rice YSL (yellow stripe-like) gene 8, Probable metal-nicotianamine transporter YSL8, Protein YELLOW STRIPE LIKE 8;PGFD=Os02t0116400-01
chr02	irgsp1_rep	five_prime_UTR	869014	869292	.	-	.	Parent=Os02t0116400-01
chr02	irgsp1_rep	CDS	867484	869013	.	-	.	Parent=Os02t0116400-01
chr02	irgsp1_rep	CDS	866336	866890	.	-	.	Parent=Os02t0116400-01
chr02	irgsp1_rep	three_prime_UTR	866007	866335	.	-	.	Parent=Os02t0116400-01
chr02	irgsp1_rep	mRNA	870853	875665	.	+	.	ID=Os02t0116500-01;Name=Os02t0116500-01;Locus_id=Os02g0116500;Note=Similar to Protochlorophyllide reductase homologue.;Transcript_evidence=AK242790 (DDBJ, Best hit);ORF_evidence=Q9ZSV0 (UniProt);InterPro=Short-chain dehydrogenase/reductase SDR (IPR002198),Glucose/ribitol dehydrogenase (IPR002347),NAD(P)-binding domain (IPR016040);GO=Biological Process: metabolic process (GO:0008152),Molecular Function: nucleotide binding (GO:0000166),Molecular Function: oxidoreductase activity (GO:0016491);KEGG=Os02t0116500-01;NIAS_FLcDNA=J090057L11;PGFD=Os02t0116500-01
chr02	irgsp1_rep	five_prime_UTR	870853	870910	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	CDS	870911	871203	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	CDS	872559	872679	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	CDS	872975	873092	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	CDS	873218	873354	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	CDS	873583	873684	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	CDS	873862	873954	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	CDS	875047	875119	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	CDS	875213	875478	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	three_prime_UTR	875479	875665	.	+	.	Parent=Os02t0116500-01
chr02	irgsp1_rep	mRNA	875964	878615	.	-	.	ID=Os02t0116600-01;Name=Os02t0116600-01;Locus_id=Os02g0116600;Note=Helix-loop-helix DNA-binding domain containing protein.;Transcript_evidence=AK103434 (DDBJ, Best hit);ORF_evidence=B6SST8 (UniProt);InterPro=Helix-loop-helix DNA-binding (IPR011598);KEGG=Os02t0116600-01;NIAS_FLcDNA=J033129B02;PGFD=Os02t0116600-01;IDCGP=Os02t0116600-01
chr02	irgsp1_rep	five_prime_UTR	878356	878615	.	-	.	Parent=Os02t0116600-01
chr02	irgsp1_rep	CDS	878246	878355	.	-	.	Parent=Os02t0116600-01
chr02	irgsp1_rep	CDS	877508	877570	.	-	.	Parent=Os02t0116600-01
chr02	irgsp1_rep	CDS	877222	877302	.	-	.	Parent=Os02t0116600-01
chr02	irgsp1_rep	CDS	876937	877099	.	-	.	Parent=Os02t0116600-01
chr02	irgsp1_rep	CDS	876317	876610	.	-	.	Parent=Os02t0116600-01
chr02	irgsp1_rep	three_prime_UTR	875964	876316	.	-	.	Parent=Os02t0116600-01
chr02	irgsp1_rep	mRNA	876032	878452	.	-	.	ID=Os02t0116600-02;Name=Os02t0116600-02;Locus_id=Os02g0116600;Note=Helix-loop-helix DNA-binding domain containing protein.;Transcript_evidence=AK104188 (DDBJ, Best hit),AK060881 (DDBJ, Best hit);ORF_evidence=B6SST8 (UniProt);InterPro=Helix-loop-helix DNA-binding (IPR011598);KEGG=Os02t0116600-02;NIAS_FLcDNA=006-303-B03,001-035-A10;PGFD=Os02t0116600-02
chr02	irgsp1_rep	five_prime_UTR	878356	878452	.	-	.	Parent=Os02t0116600-02
chr02	irgsp1_rep	CDS	878246	878355	.	-	.	Parent=Os02t0116600-02
chr02	irgsp1_rep	CDS	877508	877570	.	-	.	Parent=Os02t0116600-02
chr02	irgsp1_rep	CDS	877222	877302	.	-	.	Parent=Os02t0116600-02
chr02	irgsp1_rep	CDS	876937	877099	.	-	.	Parent=Os02t0116600-02
chr02	irgsp1_rep	CDS	876317	876610	.	-	.	Parent=Os02t0116600-02
chr02	irgsp1_rep	three_prime_UTR	876032	876316	.	-	.	Parent=Os02t0116600-02
chr02	irgsp1_rep	mRNA	884324	887679	.	+	.	ID=Os02t0116700-01;Name=Os02t0116700-01;Locus_id=Os02g0116700;Note=Protein kinase, core domain containing protein.;Transcript_evidence=AK109928 (DDBJ, Best hit);ORF_evidence=Q258Z9 (UniProt);InterPro=Protein kinase, catalytic domain (IPR000719),Leucine-rich repeat (IPR001611),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Serine/threonine-protein kinase-like domain (IPR017442);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein binding (GO:0005515),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os02t0116700-01;NIAS_FLcDNA=002-151-H03;PGFD=Os02t0116700-01
chr02	irgsp1_rep	five_prime_UTR	884324	884466	.	+	.	Parent=Os02t0116700-01
chr02	irgsp1_rep	CDS	884467	887649	.	+	.	Parent=Os02t0116700-01
chr02	irgsp1_rep	three_prime_UTR	887650	887679	.	+	.	Parent=Os02t0116700-01
chr02	irgsp1_rep	mRNA	884549	887574	.	-	.	ID=Os02t0116750-00;Name=Os02t0116750-00;Locus_id=Os02g0116750;Note=Hypothetical protein.;Transcript_evidence=AK366175 (DDBJ);ORF_evidence=longestORF
chr02	irgsp1_rep	five_prime_UTR	886809	887574	.	-	.	Parent=Os02t0116750-00
chr02	irgsp1_rep	CDS	886237	886808	.	-	.	Parent=Os02t0116750-00
chr02	irgsp1_rep	CDS	884549	885195	.	-	.	Parent=Os02t0116750-00
chr02	irgsp1_rep	mRNA	890263	894233	.	+	.	ID=Os02t0116800-01;Name=Os02t0116800-01;Locus_id=Os02g0116800;Note=Remorin, C-terminal region domain containing protein.;Transcript_evidence=AK102604 (DDBJ, Best hit);ORF_evidence=A2X045 (UniProt);InterPro=Remorin, C-terminal (IPR005516);KEGG=Os02t0116800-01;NIAS_FLcDNA=J033098O09;PGFD=Os02t0116800-01;IDCGP=Os02t0116800-01
chr02	irgsp1_rep	five_prime_UTR	890263	890390	.	+	.	Parent=Os02t0116800-01
chr02	irgsp1_rep	CDS	890391	890429	.	+	.	Parent=Os02t0116800-01
chr02	irgsp1_rep	CDS	890565	890730	.	+	.	Parent=Os02t0116800-01
chr02	irgsp1_rep	CDS	891209	891769	.	+	.	Parent=Os02t0116800-01
chr02	irgsp1_rep	CDS	892365	892845	.	+	.	Parent=Os02t0116800-01
chr02	irgsp1_rep	CDS	892952	893033	.	+	.	Parent=Os02t0116800-01
chr02	irgsp1_rep	CDS	893818	894021	.	+	.	Parent=Os02t0116800-01
chr02	irgsp1_rep	three_prime_UTR	894022	894233	.	+	.	Parent=Os02t0116800-01
chr02	irgsp1_rep	mRNA	894656	895615	.	-	.	ID=Os02t0116900-01;Name=Os02t0116900-01;Locus_id=Os02g0116900;Note=Similar to 15.9 kDa subunit of RNA polymerase II.;Transcript_evidence=AK121401 (DDBJ, Best hit);ORF_evidence=NP_001148722.1 (RefSeq);InterPro=RNA polymerase II, Rpb4 (IPR005574),RNA polymerase II, Rpb4, core (IPR006590),HRDC-like (IPR010997);GO=Biological Process: transcription, DNA-dependent (GO:0006351),Biological Process: cellular metabolic process (GO:0044237),Molecular Function: nucleotide binding (GO:0000166),Molecular Function: catalytic activity (GO:0003824),Molecular Function: DNA-directed RNA polymerase activity (GO:0003899);KEGG=Os02t0116900-01;NIAS_FLcDNA=J023131N03;PGFD=Os02t0116900-01;IDCGP=Os02t0116900-01
chr02	irgsp1_rep	five_prime_UTR	895525	895615	.	-	.	Parent=Os02t0116900-01
chr02	irgsp1_rep	CDS	895476	895524	.	-	.	Parent=Os02t0116900-01
chr02	irgsp1_rep	CDS	895019	895398	.	-	.	Parent=Os02t0116900-01
chr02	irgsp1_rep	three_prime_UTR	894656	895018	.	-	.	Parent=Os02t0116900-01
chr02	irgsp1_rep	mRNA	896074	900370	.	+	.	ID=Os02t0117100-01;Name=Os02t0117100-01;Locus_id=Os02g0117100;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site domain containing protein.;Transcript_evidence=AK064929 (DDBJ, Best hit);ORF_evidence=Q9SSM1 (UniProt);InterPro=Domain of unknown function DUF1995 (IPR018962);KEGG=Os02t0117100-01;NIAS_FLcDNA=J013000O03;PGFD=Os02t0117100-01;IDCGP=Os02t0117100-01
chr02	irgsp1_rep	five_prime_UTR	896074	896127	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	896128	896429	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	896578	896608	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	896903	896995	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	897096	897158	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	897279	897390	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	897947	898032	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	898845	898903	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	898990	899092	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	899182	899242	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	899472	899554	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	899635	899715	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	CDS	900018	900077	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	three_prime_UTR	900078	900370	.	+	.	Parent=Os02t0117100-01
chr02	irgsp1_rep	mRNA	900980	905838	.	+	.	ID=Os02t0117200-01;Name=Os02t0117200-01;Locus_id=Os02g0117200;Note=Similar to MIR-interacting saposin-like protein.;Transcript_evidence=AK241361 (DDBJ, Best hit);ORF_evidence=B6T6D7 (UniProt);InterPro=Protein of unknown function DUF3456 (IPR021852);KEGG=Os02t0117200-01;NIAS_FLcDNA=J065151F22;PGFD=Os02t0117200-01
chr02	irgsp1_rep	five_prime_UTR	900980	901033	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	901034	901153	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	901455	901481	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	901713	901792	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	903739	903811	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	904015	904072	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	904561	904615	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	905140	905164	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	905330	905421	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	CDS	905540	905570	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	three_prime_UTR	905571	905838	.	+	.	Parent=Os02t0117200-01
chr02	irgsp1_rep	mRNA	906668	911368	.	+	.	ID=Os02t0117400-01;Name=Os02t0117400-01;Locus_id=Os02g0117400;Note=Peptidase A22B, signal peptide peptidase domain containing protein.;Transcript_evidence=AK061815 (DDBJ, Best hit),AK102022 (DDBJ, Best hit);ORF_evidence=XP_002875188.1 (RefSeq);InterPro=Peptidase A22, presenilin signal peptide (IPR006639),Peptidase A22B, signal peptide peptidase (IPR007369);GO=Cellular Component: integral to membrane (GO:0016021),Molecular Function: aspartic-type endopeptidase activity (GO:0004190);NIAS_FLcDNA=001-040-B05,J033080J11;PGFD=Os02t0117400-01;IDCGP=Os02t0117400-01
chr02	irgsp1_rep	five_prime_UTR	906668	906854	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	five_prime_UTR	907161	907252	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	907253	907292	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	907416	907531	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	907661	907812	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	907918	908003	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	908182	908309	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	908451	908501	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	908774	908860	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	908964	909033	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	909729	909865	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	910313	910390	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	CDS	910971	911057	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	three_prime_UTR	911058	911368	.	+	.	Parent=Os02t0117400-01
chr02	irgsp1_rep	mRNA	918797	923968	.	+	.	ID=Os02t0117500-01;Name=Os02t0117500-01;Locus_id=Os02g0117500;Note=Similar to Glutamate receptor 3.3 precursor (Ligand-gated ion channel 3.3).;Transcript_evidence=AK068706 (DDBJ, Best hit);ORF_evidence=B8AGI2 (UniProt);InterPro=Ionotropic glutamate receptor (IPR001320),Extracellular solute-binding protein, family 3 (IPR001638),Extracellular ligand-binding receptor (IPR001828),GPCR, family 3, gamma-aminobutyric acid receptor, type B (IPR002455),Ionotropic glutamate receptor, plant (IPR017103);GO=Biological Process: transport (GO:0006810),Biological Process: G-protein coupled receptor protein signaling pathway (GO:0007186),Cellular Component: membrane (GO:0016020),Cellular Component: integral to membrane (GO:0016021),Cellular Component: outer membrane-bounded periplasmic space (GO:0030288),Molecular Function: GABA-B receptor activity (GO:0004965),Molecular Function: ionotropic glutamate receptor activity (GO:0004970),Molecular Function: transporter activity (GO:0005215),Molecular Function: extracellular-glutamate-gated ion channel activity (GO:0005234);KEGG=Os02t0117500-01;NIAS_FLcDNA=J013158O16;PGFD=Os02t0117500-01
chr02	irgsp1_rep	five_prime_UTR	918797	918954	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	five_prime_UTR	920055	920127	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	CDS	920128	920392	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	CDS	920491	921839	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	CDS	921921	922198	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	CDS	922534	922565	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	CDS	922654	923060	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	CDS	923210	923713	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	three_prime_UTR	923714	923968	.	+	.	Parent=Os02t0117500-01
chr02	irgsp1_rep	mRNA	923296	925069	.	-	.	ID=Os02t0117550-01;Name=Os02t0117550-01;Locus_id=Os02g0117550;Note=Hypothetical gene.;Transcript_evidence=AK288992 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os02t0117550-01;NIAS_FLcDNA=J090087J01
chr02	irgsp1_rep	five_prime_UTR	924268	925069	.	-	.	Parent=Os02t0117550-01
chr02	irgsp1_rep	CDS	924043	924267	.	-	.	Parent=Os02t0117550-01
chr02	irgsp1_rep	three_prime_UTR	923296	924042	.	-	.	Parent=Os02t0117550-01
chr02	irgsp1_rep	mRNA	924542	926314	.	+	.	ID=Os02t0117600-01;Name=Os02t0117600-01;Locus_id=Os02g0117600;Note=Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein.;Transcript_evidence=AK104162 (DDBJ, Best hit),AK111582 (DDBJ, Best hit);ORF_evidence=XP_002890409.1 (RefSeq);InterPro=Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain (IPR001179),Peptidyl-prolyl cis-trans isomerase, FKBP-type (IPR023566);GO=Biological Process: protein folding (GO:0006457);NIAS_FLcDNA=006-211-G12,J013082P03;PGFD=Os02t0117600-01;IDCGP=Os02t0117600-01
chr02	irgsp1_rep	CDS	924542	924839	.	+	.	Parent=Os02t0117600-01
chr02	irgsp1_rep	CDS	925150	925220	.	+	.	Parent=Os02t0117600-01
chr02	irgsp1_rep	CDS	925303	925389	.	+	.	Parent=Os02t0117600-01
chr02	irgsp1_rep	CDS	925482	925631	.	+	.	Parent=Os02t0117600-01
chr02	irgsp1_rep	CDS	925750	925809	.	+	.	Parent=Os02t0117600-01
chr02	irgsp1_rep	CDS	925914	925976	.	+	.	Parent=Os02t0117600-01
chr02	irgsp1_rep	three_prime_UTR	925977	926013	.	+	.	Parent=Os02t0117600-01
chr02	irgsp1_rep	three_prime_UTR	926097	926314	.	+	.	Parent=Os02t0117600-01
chr02	irgsp1_rep	mRNA	924566	926386	.	+	.	ID=Os02t0117600-02;Name=Os02t0117600-02;Locus_id=Os02g0117600;Note=Similar to F2D10.32.;Transcript_evidence=AK112015 (DDBJ, Best hit);ORF_evidence=XP_002890409.1 (RefSeq);InterPro=Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain (IPR001179),Peptidyl-prolyl cis-trans isomerase, FKBP-type (IPR023566);GO=Biological Process: protein folding (GO:0006457);NIAS_FLcDNA=006-303-D03
chr02	irgsp1_rep	five_prime_UTR	924566	924595	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	CDS	924596	924839	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	CDS	925150	925220	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	CDS	925303	925389	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	CDS	925482	925631	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	CDS	925750	925809	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	CDS	925914	925976	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	three_prime_UTR	925977	926013	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	three_prime_UTR	926097	926386	.	+	.	Parent=Os02t0117600-02
chr02	irgsp1_rep	mRNA	926031	929928	.	-	.	ID=Os02t0117700-01;Name=Os02t0117700-01;Locus_id=Os02g0117700;Note=UDPase;Transcript_evidence=AK071248 (DDBJ);ORF_evidence=Q9M4X0 (UniProt),Q6ZGL5 (manual curation);InterPro=UTP--glucose-1-phosphate uridylyltransferase (IPR002618),UTP--glucose-1-phosphate uridylyltransferase, subgroup (IPR016267);GO=Biological Process: metabolic process (GO:0008152),Molecular Function: nucleotidyltransferase activity (GO:0016779);KEGG=Os02t0117700-01 (EC:2.7.7.9);NIAS_FLcDNA=J023088D10;Oryzabase=7491;CGSNL Gene Symbol=UGP2;CGSNL Gene Name=UDP-GLUCOSE PYROPHOSPHORYLASE 2;CGSNL Gene Symbol Synonym(s)=Ugp2;CGSNL Gene Name Synonym(s)=UDP-glucose pyrophosphorylase (UGPase)2, UDP-Glucose Pyrophosphorylase2;Literature_PMID=17400897;Manual Curation=August 2, 2009;PGFD=Os02t0117700-01;IDCGP=Os02t0117700-01
chr02	irgsp1_rep	five_prime_UTR	929869	929928	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	929810	929868	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	929656	929703	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	929354	929536	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	929177	929237	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	929002	929079	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	928874	928924	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	928721	928794	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	928556	928628	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	928403	928460	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	928244	928290	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	928100	928165	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	927899	927931	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	927755	927807	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	927596	927671	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	927462	927518	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	927298	927381	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	927129	927227	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	926928	927032	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	926637	926708	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	CDS	926333	926359	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	three_prime_UTR	926031	926332	.	-	.	Parent=Os02t0117700-01
chr02	irgsp1_rep	mRNA	926636	928472	.	+	.	ID=Os02t0117750-00;Name=Os02t0117750-00;Locus_id=Os02g0117750;Note=Hypothetical gene.;Transcript_evidence=BT016879 (DDBJ);ORF_evidence=longestORF;KEGG=Os02t0117750-00;PGFD=Os02t0117750-00
chr02	irgsp1_rep	five_prime_UTR	926636	926691	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	five_prime_UTR	926910	926937	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	CDS	926938	927029	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	CDS	927126	927235	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	CDS	927307	927359	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	three_prime_UTR	927360	927369	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	three_prime_UTR	927448	927517	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	three_prime_UTR	927595	927669	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	three_prime_UTR	927753	927824	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	three_prime_UTR	928083	928208	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	three_prime_UTR	928398	928472	.	+	.	Parent=Os02t0117750-00
chr02	irgsp1_rep	mRNA	930302	934270	.	-	.	ID=Os02t0117800-01;Name=Os02t0117800-01;Locus_id=Os02g0117800;Note=Similar to APG5 (Autophagy 5) like protein.;Transcript_evidence=AK063557 (DDBJ, Best hit);ORF_evidence=Q6ZGL4 (UniProt);InterPro=Autophagy-related protein 5 (IPR007239);GO=Biological Process: autophagy (GO:0006914),Cellular Component: cytoplasm (GO:0005737);KEGG=Os02t0117800-01;NIAS_FLcDNA=001-117-E11;Oryzabase=9639;CGSNL Gene Symbol=ATG5;CGSNL Gene Name=AUTOPHAGY ASSOCIATED GENE 5;CGSNL Gene Symbol Synonym(s)=OsATG5;CGSNL Gene Name Synonym(s)=autophagy 5;PGFD=Os02t0117800-01
chr02	irgsp1_rep	five_prime_UTR	934214	934270	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	CDS	934079	934213	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	CDS	933411	933535	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	CDS	932249	932315	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	CDS	932068	932157	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	CDS	931888	931975	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	CDS	931567	931704	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	CDS	931223	931354	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	CDS	930461	930828	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	three_prime_UTR	930302	930460	.	-	.	Parent=Os02t0117800-01
chr02	irgsp1_rep	mRNA	934683	937786	.	-	.	ID=Os02t0117900-01;Name=Os02t0117900-01;Locus_id=Os02g0117900;Note=Protein of unknown function DUF231, plant domain containing protein.;Transcript_evidence=AK069109 (DDBJ, Best hit);ORF_evidence=A2X053 (UniProt);InterPro=Domain of unknown function DUF231, plant (IPR004253);KEGG=Os02t0117900-01;NIAS_FLcDNA=J023007M17;PGFD=Os02t0117900-01
chr02	irgsp1_rep	five_prime_UTR	937708	937786	.	-	.	Parent=Os02t0117900-01
chr02	irgsp1_rep	CDS	937175	937707	.	-	.	Parent=Os02t0117900-01
chr02	irgsp1_rep	CDS	935965	936105	.	-	.	Parent=Os02t0117900-01
chr02	irgsp1_rep	CDS	935241	935490	.	-	.	Parent=Os02t0117900-01
chr02	irgsp1_rep	CDS	934865	935152	.	-	.	Parent=Os02t0117900-01
chr02	irgsp1_rep	three_prime_UTR	934683	934864	.	-	.	Parent=Os02t0117900-01
chr02	irgsp1_rep	mRNA	938375	941300	.	-	.	ID=Os02t0118000-01;Name=Os02t0118000-01;Locus_id=Os02g0118000;Note=Pentatricopeptide repeat domain containing protein.;Transcript_evidence=AK068524 (DDBJ, Best hit);ORF_evidence=B6SYZ1 (UniProt);InterPro=Pentatricopeptide repeat (IPR002885);KEGG=Os02t0118000-01;NIAS_FLcDNA=J013155O22;PGFD=Os02t0118000-01
chr02	irgsp1_rep	five_prime_UTR	941052	941300	.	-	.	Parent=Os02t0118000-01
chr02	irgsp1_rep	five_prime_UTR	939991	939995	.	-	.	Parent=Os02t0118000-01
chr02	irgsp1_rep	CDS	938530	939990	.	-	.	Parent=Os02t0118000-01
chr02	irgsp1_rep	three_prime_UTR	938375	938529	.	-	.	Parent=Os02t0118000-01
chr02	irgsp1_rep	mRNA	950731	954690	.	+	.	ID=Os02t0118200-01;Name=Os02t0118200-01;Locus_id=Os02g0118200;Note=Similar to Protein kinase APK1B, chloroplast precursor (EC 2.7.1.-).;Transcript_evidence=AK111716 (DDBJ, Best hit);ORF_evidence=NP_001147123.1 (RefSeq);InterPro=Protein kinase, catalytic domain (IPR000719),Serine-threonine/tyrosine-protein kinase (IPR001245),Serine/threonine-protein kinase, catalytic  domain (IPR002290),Serine/threonine-protein kinase, active site (IPR008271),Protein kinase-like domain (IPR011009),Protein kinase, ATP binding site (IPR017441),Tyrosine-protein kinase, catalytic domain (IPR020635);GO=Biological Process: protein phosphorylation (GO:0006468),Molecular Function: protein kinase activity (GO:0004672),Molecular Function: protein serine/threonine kinase activity (GO:0004674),Molecular Function: protein tyrosine kinase activity (GO:0004713),Molecular Function: ATP binding (GO:0005524),Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772);KEGG=Os02t0118200-01;NIAS_FLcDNA=J023022O07;PGFD=Os02t0118200-01
chr02	irgsp1_rep	five_prime_UTR	950731	950854	.	+	.	Parent=Os02t0118200-01
chr02	irgsp1_rep	CDS	950855	950921	.	+	.	Parent=Os02t0118200-01
chr02	irgsp1_rep	CDS	951554	951924	.	+	.	Parent=Os02t0118200-01
chr02	irgsp1_rep	CDS	952553	952688	.	+	.	Parent=Os02t0118200-01
chr02	irgsp1_rep	CDS	952956	953092	.	+	.	Parent=Os02t0118200-01
chr02	irgsp1_rep	CDS	953168	953291	.	+	.	Parent=Os02t0118200-01
chr02	irgsp1_rep	CDS	954041	954489	.	+	.	Parent=Os02t0118200-01
chr02	irgsp1_rep	three_prime_UTR	954490	954690	.	+	.	Parent=Os02t0118200-01
chr02	irgsp1_rep	mRNA	961519	965454	.	+	.	ID=Os02t0118400-01;Name=Os02t0118400-01;Locus_id=Os02g0118400;Note=Similar to CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75).;Transcript_evidence=AK101004 (DDBJ, Best hit);ORF_evidence=Q4JEY4 (UniProt);InterPro=Glycosyl transferase, family 29 (IPR001675);GO=Biological Process: protein glycosylation (GO:0006486),Cellular Component: integral to Golgi membrane (GO:0030173),Molecular Function: sialyltransferase activity (GO:0008373);KEGG=Os02t0118400-01 (EC:2.4.99.1);NIAS_FLcDNA=J023147K09;PGFD=Os02t0118400-01;IDCGP=Os02t0118400-01
chr02	irgsp1_rep	five_prime_UTR	961519	961624	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	961625	961709	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	961796	961869	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	962236	962325	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	963087	963164	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	963348	963448	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	963540	963732	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	963810	963900	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	963970	964034	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	964126	964280	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	964363	964444	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	964569	964678	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	CDS	964885	965080	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	three_prime_UTR	965081	965454	.	+	.	Parent=Os02t0118400-01
chr02	irgsp1_rep	mRNA	961549	965543	.	+	.	ID=Os02t0118400-02;Name=Os02t0118400-02;Locus_id=Os02g0118400;Note=Similar to CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75).;Transcript_evidence=AK064002 (DDBJ, Best hit);ORF_evidence=Q4JEY4 (UniProt);InterPro=Glycosyl transferase, family 29 (IPR001675);GO=Biological Process: protein glycosylation (GO:0006486),Cellular Component: integral to Golgi membrane (GO:0030173),Molecular Function: sialyltransferase activity (GO:0008373);KEGG=Os02t0118400-02 (EC:2.4.99.1);NIAS_FLcDNA=001-124-F12;PGFD=Os02t0118400-02
chr02	irgsp1_rep	five_prime_UTR	961549	961624	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	961625	961709	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	961796	961869	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	962236	962325	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	963087	963164	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	963348	963448	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	963540	963732	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	963810	963900	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	963970	964034	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	964126	964280	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	964363	964444	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	964569	964678	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	CDS	964885	965080	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	three_prime_UTR	965081	965543	.	+	.	Parent=Os02t0118400-02
chr02	irgsp1_rep	mRNA	966113	966389	.	-	.	ID=Os02t0118500-00;Name=Os02t0118500-00;Locus_id=Os02g0118500;Note=Conserved hypothetical protein.;Transcript_evidence=AK377053 (DDBJ);ORF_evidence=Q6ZH44 (UniProt)
chr02	irgsp1_rep	five_prime_UTR	966389	966389	.	-	.	Parent=Os02t0118500-00
chr02	irgsp1_rep	CDS	966113	966388	.	-	.	Parent=Os02t0118500-00
chr02	irgsp1_rep	mRNA	978845	986395	-0.786301	+	.	ID=Os02t0118800-00;Name=Os02t0118800-00;Locus_id=Os02g0118800;Note=Similar to NBS-LRR disease resistance protein homologue (Fragment).;Transcript_evidence=ab initio prediction;ORF_evidence=Q84KC9 (UniProt)
chr02	irgsp1_rep	CDS	978845	979205	-1.50299	+	0	Parent=Os02t0118800-00
chr02	irgsp1_rep	CDS	979686	980577	-1.27928	+	2	Parent=Os02t0118800-00
chr02	irgsp1_rep	CDS	983059	985037	-2.10449	+	1	Parent=Os02t0118800-00
chr02	irgsp1_rep	CDS	986286	986395	-2.23196	+	2	Parent=Os02t0118800-00
chr02	irgsp1_rep	mRNA	989061	997516	.	-	.	ID=Os02t0118850-01;Name=Os02t0118850-01;Locus_id=Os02g0118850;Note=Hypothetical gene.;Transcript_evidence=AK242786 (DDBJ, Best hit);ORF_evidence=longestORF;KEGG=Os02t0118850-01;NIAS_FLcDNA=J090056H01
chr02	irgsp1_rep	five_prime_UTR	996738	997516	.	-	.	Parent=Os02t0118850-01
chr02	irgsp1_rep	five_prime_UTR	995600	995774	.	-	.	Parent=Os02t0118850-01
chr02	irgsp1_rep	five_prime_UTR	995224	995529	.	-	.	Parent=Os02t0118850-01
chr02	irgsp1_rep	CDS	994966	995223	.	-	.	Parent=Os02t0118850-01
chr02	irgsp1_rep	three_prime_UTR	993535	994965	.	-	.	Parent=Os02t0118850-01
chr02	irgsp1_rep	three_prime_UTR	989369	989818	.	-	.	Parent=Os02t0118850-01
chr02	irgsp1_rep	three_prime_UTR	989061	989281	.	-	.	Parent=Os02t0118850-01
chr02	irgsp1_rep	mRNA	991320	991828	.	+	.	ID=Os02t0118875-00;Name=Os02t0118875-00;Locus_id=Os02g0118875;Note=NB-ARC domain containing protein.;Transcript_evidence=HQ005765 (DDBJ, Best hit);ORF_evidence=GeneMark;InterPro=NB-ARC (IPR002182);GO=Molecular Function: ADP binding (GO:0043531)
chr02	irgsp1_rep	five_prime_UTR	991320	991382	.	+	.	Parent=Os02t0118875-00
chr02	irgsp1_rep	CDS	991383	991828	.	+	.	Parent=Os02t0118875-00
chr02	irgsp1_rep	mRNA	993563	995506	-0.565322	+	.	ID=Os02t0118900-00;Name=Os02t0118900-00;Locus_id=Os02g0118900;Note=Similar to NBS-LRR disease resistance protein homologue (Fragment).;Transcript_evidence=ab initio prediction;ORF_evidence=Q84KC9 (UniProt)
chr02	irgsp1_rep	CDS	993563	995506	-0.565322	+	0	Parent=Os02t0118900-00
