TASUKE 1.1.0 release. (May 12, 2014)
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* New feature: Moving to target region by Drag and Drop on the position meter.

* New feature: An animation was added when loading data from database.

* Improvement: Loading time from database was significantly reduced.

* Depth file is not required for viewing detail information.


TASUKE 1.0.0 release. (March 12, 2014)
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* New feature : Showing each variants by real position.
  It came to be able to show each variants variants by real position.
  You can see that by clicking on frequency button of view mode on the top menu.

* New feature : Searching annotations by keyword
  You can search annotations by keyword. Search results appears on dialog box.
  The function uses ID and Note tag in GFF file which is target of search.
  *If you want to use this function, try running tasuke_track.pl(in this version) again.
  
* New feature : Accession management tool is become flexible.
  [tasule_init.pl] : This tool initialize database for TASUKE.
  [tasuke_accession.pl] : This tool has 3 functions. Addition of accession, updating accession information and deleting accession.
  
* New feature : Fine tunable zoom level.
  New controller is available.
  
* New feature : Order of accession
  You can change the order of accession by writing accession_ID on "order.conf".
  
	1) If you do not set accession_ID to order.conf, all accession will be seen on browser. 
	2) Only defined accession by accession.pl is viewed. Others will be ignored.
	3) The accession_ID will be ignored when same accession_ID is found.
	
	For example.
	----DB-----|--order.conf-|--on browser--
	| sample1  |   sample2   |   sample2   |
	| sample2  |   sample2   |   sample4   |
	| sample3  |   sample4   |             |
	| sample4  |   sample5   |             |
	----------------------------------------

* Improvement : TASUKE can accept VCF and multiple sample VCF file generated by GATK(1.6.x or 2.x).

* Improvement : Support for PHP 5.5

* Improvement : Support for Safari on iOS

* Indicator is draggable on browser.

* "snpEff", "Reset" and "Block" buttons were relocated.

* The Color of SNP effect(by snpEFF) is changed white to light green.

* Bug fix : If you installed only few accessions, the block information was truncated.

* Bug fix : tasuke_depth_db.pl was failed depend on server environment.

* Bug fix : View of a chromosome.

* Bug fix : Design of a indicator.

* Bug fix : Moving to next 1/4-window.

* Bug fix : The variant which has error information of snpEFF was not installed in database.

* Bug fix : Clicking on the block which has only depth, then previous snp/indel information appears.

* Bug fix : View of screen message.


TASUKE 0.8.4 release. (October 15, 2013)
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* Bug fix : When you click  SNP/INDEL-block, you can't view a part of detail informations.



TASUKE 0.8.3 release. (October 11, 2013)
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* Bug fix : Maximum of depth value for display was disabled.



TASUKE 0.8.2 release. (September 13, 2013)
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* Improvement : Depth installation tool
  The new install process is 3 to 10 times faster than "tasuke_depth_vcf.pl".
  [tasuke_bamtodepth.pl] : Convert bam file to tasuke-depth formatted file(depth information for the MySQL database).
  [tasuke_depth_db.pl] : Install tasuke-depth formatted file in MySQL database using this tool.
  
  View detail : http://tasuke.dna.affrc.go.jp/index.php/Installation
  
* The controller, variant filter and indicator for depth and variants are integrated into floating box.

* Added an option for the "Export FASTA". The option can be set line width.

* Added a dialog box for "Change reference" feature.

* Bug fix : Indicator on view mode of depth.

* Bug fix : Blank line at beginning of download file.

* Bug fix : Background color and canvas are broken when horizontal scrolling.



TASUKE 0.8.1 release. (July 4, 2013)
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* New feature : Export FASTA
  The fasta file being exported shows preferentially variant type allele regardless of its genotype gheterozygous or homozygoush.
  Ns in the alignment indicates unmapped site (Depth = 0) as well as site below the threshold of depth and quality user set. 

* Added "GO" buttom on a Search & Jump dialog.

* Bug fix : Display of insertion sequence on view of 1bp Scale.

* Bug fix : Reverse complement of reference sequence.

* Bug fix : Track display and message of search by postion or annotation ID.



TASUKE 0.8.0 release. (May 20, 2013)
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This is the first release of TASUKE.